BLASTX nr result

ID: Panax21_contig00026308 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00026308
         (644 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002321388.1| predicted protein [Populus trichocarpa] gi|2...   244   8e-63
ref|XP_002271917.1| PREDICTED: uncharacterized protein LOC100245...   239   4e-61
emb|CBI23039.3| unnamed protein product [Vitis vinifera]              214   8e-54
ref|XP_002534336.1| WD-repeat protein, putative [Ricinus communi...   206   4e-51
ref|XP_002318441.1| predicted protein [Populus trichocarpa] gi|2...   194   9e-48

>ref|XP_002321388.1| predicted protein [Populus trichocarpa] gi|222868384|gb|EEF05515.1|
           predicted protein [Populus trichocarpa]
          Length = 726

 Score =  244 bits (624), Expect = 8e-63
 Identities = 125/211 (59%), Positives = 154/211 (72%), Gaps = 1/211 (0%)
 Frame = -1

Query: 638 LGSRENFVCRNANKDASMEGDVDEQGQHITPSKVRVVGKDQLITADDGG-TSRSSPLAQQ 462
           LGS ENFVCR+    + M  +VDE GQH   ++   VG +Q +TA++   TS S P  QQ
Sbjct: 131 LGSVENFVCRDGVSGSGMMCNVDELGQHGKANEGCEVGSEQSVTAEESEKTSESYPSFQQ 190

Query: 461 LVQKEIKVAGNMARTMNRMKDSWLSRLRSFSCVLDRQVTADGLRPGGPDQILRGRVQRVR 282
           LVQKE+     +  T  R+K  WLSR+RS +C++DR   AD LR    D +LR RVQR++
Sbjct: 191 LVQKEVGEPNTLVDTPRRLKKGWLSRIRSITCIVDRPQEADKLRHDDDDALLRHRVQRIK 250

Query: 281 VRHCKKRLRELSALFVGQDIQAHEGSILTMKFSPDGQYLASAGEDGIVRVWQIVEDERLN 102
           VR C KR +ELSAL+ GQDIQAHEGSILTMKFSPDGQYLASAGEDG+VRVWQ++E ER N
Sbjct: 251 VRRCGKRTKELSALYKGQDIQAHEGSILTMKFSPDGQYLASAGEDGVVRVWQVLEGERSN 310

Query: 101 EIDIPDIDPSCIYFTVNHLSELAPLMTEQEK 9
           E+DIP+IDPSC+YFTVN L EL PL  ++EK
Sbjct: 311 ELDIPEIDPSCMYFTVNQLPELKPLFFDKEK 341


>ref|XP_002271917.1| PREDICTED: uncharacterized protein LOC100245187 [Vitis vinifera]
          Length = 731

 Score =  239 bits (609), Expect = 4e-61
 Identities = 122/214 (57%), Positives = 151/214 (70%), Gaps = 3/214 (1%)
 Frame = -1

Query: 635 GSRENFVCRNANKDASMEGDVDEQGQHITPSKVRVVGKDQLITADDGGTSRSSPLA---Q 465
           G +E FVCR  N D   E DVDE G+    S+ R VG D+L+T ++      S L+   Q
Sbjct: 136 GLQEKFVCRIGNLDVGAEFDVDEMGEGSEVSEFREVGLDRLVTINECQNISDSLLSSSVQ 195

Query: 464 QLVQKEIKVAGNMARTMNRMKDSWLSRLRSFSCVLDRQVTADGLRPGGPDQILRGRVQRV 285
           Q++Q+EI+ A N      R+K  WLSRLRS SC++DR      L     + I   R+QRV
Sbjct: 196 QVIQREIEEASNPVGAAKRVKKGWLSRLRSMSCIMDRHGEIHNLTTNDTNPIPGARIQRV 255

Query: 284 RVRHCKKRLRELSALFVGQDIQAHEGSILTMKFSPDGQYLASAGEDGIVRVWQIVEDERL 105
           RVR C+K+++ELSAL+ GQDIQAHEGSIL+MKFSPDG+YLASAGEDGIVR+WQ+VEDER 
Sbjct: 256 RVRQCRKQMKELSALYKGQDIQAHEGSILSMKFSPDGKYLASAGEDGIVRIWQVVEDERS 315

Query: 104 NEIDIPDIDPSCIYFTVNHLSELAPLMTEQEKFS 3
           N+ DIP+IDP CIYFTVNHLSEL PL  E+EK S
Sbjct: 316 NDHDIPEIDPMCIYFTVNHLSELTPLFAEKEKLS 349


>emb|CBI23039.3| unnamed protein product [Vitis vinifera]
          Length = 674

 Score =  214 bits (546), Expect = 8e-54
 Identities = 109/187 (58%), Positives = 136/187 (72%), Gaps = 3/187 (1%)
 Frame = -1

Query: 554 ITPSKVRVVGKDQLITADDGGTSRSSPLA---QQLVQKEIKVAGNMARTMNRMKDSWLSR 384
           I  S+ R VG D+L+T ++      S L+   QQ++Q+EI+ A N      R+K  WLSR
Sbjct: 106 IEVSEFREVGLDRLVTINECQNISDSLLSSSVQQVIQREIEEASNPVGAAKRVKKGWLSR 165

Query: 383 LRSFSCVLDRQVTADGLRPGGPDQILRGRVQRVRVRHCKKRLRELSALFVGQDIQAHEGS 204
           LRS SC++DR      L     + I   R+QRVRVR C+K+++ELSAL+ GQDIQAHEGS
Sbjct: 166 LRSMSCIMDRHGEIHNLTTNDTNPIPGARIQRVRVRQCRKQMKELSALYKGQDIQAHEGS 225

Query: 203 ILTMKFSPDGQYLASAGEDGIVRVWQIVEDERLNEIDIPDIDPSCIYFTVNHLSELAPLM 24
           IL+MKFSPDG+YLASAGEDGIVR+WQ+VEDER N+ DIP+IDP CIYFTVNHLSEL PL 
Sbjct: 226 ILSMKFSPDGKYLASAGEDGIVRIWQVVEDERSNDHDIPEIDPMCIYFTVNHLSELTPLF 285

Query: 23  TEQEKFS 3
            E+EK S
Sbjct: 286 AEKEKLS 292


>ref|XP_002534336.1| WD-repeat protein, putative [Ricinus communis]
           gi|223525468|gb|EEF28046.1| WD-repeat protein, putative
           [Ricinus communis]
          Length = 714

 Score =  206 bits (523), Expect = 4e-51
 Identities = 107/211 (50%), Positives = 141/211 (66%), Gaps = 1/211 (0%)
 Frame = -1

Query: 638 LGSRENFVCRNANKDASMEGDVDEQGQHITPSKVRVVGKDQLITADDG-GTSRSSPLAQQ 462
           LGS+ENF+CR       M  + +   +H              +TA++   T  SSP  QQ
Sbjct: 132 LGSKENFLCREGTYGGGMVFNDEVNTEHS-------------VTAEESVNTYGSSPSFQQ 178

Query: 461 LVQKEIKVAGNMARTMNRMKDSWLSRLRSFSCVLDRQVTADGLRPGGPDQILRGRVQRVR 282
            +Q+E     N+       K  WL++LRS +CV+D+Q  A+ LR    D +L+ +VQRV+
Sbjct: 179 FIQRETDEPSNLMDIPRTAKKKWLNKLRSIACVVDKQREAEKLRHDDDDALLQYKVQRVK 238

Query: 281 VRHCKKRLRELSALFVGQDIQAHEGSILTMKFSPDGQYLASAGEDGIVRVWQIVEDERLN 102
           VR   KR +ELSAL+ GQDIQAHEGSI TMKFSPDGQYLASAGED +VR+W+++EDER N
Sbjct: 239 VRQSGKRTKELSALYKGQDIQAHEGSIRTMKFSPDGQYLASAGEDRVVRLWRVLEDERSN 298

Query: 101 EIDIPDIDPSCIYFTVNHLSELAPLMTEQEK 9
           E+DIP+IDPSC+YFTV+HLSEL PL  ++EK
Sbjct: 299 ELDIPEIDPSCVYFTVDHLSELKPLFIDKEK 329


>ref|XP_002318441.1| predicted protein [Populus trichocarpa] gi|222859114|gb|EEE96661.1|
           predicted protein [Populus trichocarpa]
          Length = 654

 Score =  194 bits (494), Expect = 9e-48
 Identities = 108/213 (50%), Positives = 130/213 (61%), Gaps = 3/213 (1%)
 Frame = -1

Query: 638 LGSRENFVCRNANKDASMEGDVDEQGQHITPSKVRVVGKDQLITADDGGTSRSSPLAQQL 459
           LG   NFVCR  +    M   VDE GQ                               + 
Sbjct: 108 LGLMGNFVCREGDSGGGMVCKVDELGQ------------------------------DKP 137

Query: 458 VQKEIKVAGNMARTMNRMKDSWLSRLRSFSCVLDRQVTADGLRPGGPDQ---ILRGRVQR 288
           +Q E+     +  T  R+K  WLSR+RS SC++     AD LR    D    +LR RVQR
Sbjct: 138 MQNEVGEPNTLVDTPRRLKKGWLSRIRSISCIVYSLREADKLRHDDDDDDDALLRYRVQR 197

Query: 287 VRVRHCKKRLRELSALFVGQDIQAHEGSILTMKFSPDGQYLASAGEDGIVRVWQIVEDER 108
           V+V    KR++ELSAL+ GQDIQAHEGSILTMKFSPDGQYLASAGEDG+VRVWQ++E ER
Sbjct: 198 VKVHRYGKRIKELSALYKGQDIQAHEGSILTMKFSPDGQYLASAGEDGVVRVWQVLESER 257

Query: 107 LNEIDIPDIDPSCIYFTVNHLSELAPLMTEQEK 9
            NE+DIP+IDPSCIYFTVN LSEL PL+ E+E+
Sbjct: 258 SNELDIPEIDPSCIYFTVNQLSELKPLLVEKER 290


Top