BLASTX nr result

ID: Panax21_contig00026302 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00026302
         (948 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004135523.1| PREDICTED: transcription factor TCP8-like [C...   132   2e-28
ref|XP_003592963.1| TCP family transcription factor-like protein...   130   3e-28
ref|XP_004173314.1| PREDICTED: LOW QUALITY PROTEIN: transcriptio...   130   6e-28
ref|NP_001234831.1| TCP transcription factor 11 [Solanum lycoper...   129   8e-28
ref|XP_002529010.1| transcription factor, putative [Ricinus comm...   129   8e-28

>ref|XP_004135523.1| PREDICTED: transcription factor TCP8-like [Cucumis sativus]
          Length = 505

 Score =  132 bits (331), Expect = 2e-28
 Identities = 66/86 (76%), Positives = 71/86 (82%)
 Frame = +3

Query: 690 IDASLAMVTRSDSLTLTDPSKKPSTQQTQTGAKRSTKDRHTKVDGRGRRIRMPATCAARV 869
           +DASL + TRSD+    DPS + ST       KRSTKDRHTKV+GRGRRIRMPATCAARV
Sbjct: 67  LDASLVIATRSDTTAAADPSPR-STSTANAANKRSTKDRHTKVEGRGRRIRMPATCAARV 125

Query: 870 FQLTRELGHKSDGETIEWLLQQAEPA 947
           FQLTRELGHKSDGETIEWLLQQAEPA
Sbjct: 126 FQLTRELGHKSDGETIEWLLQQAEPA 151


>ref|XP_003592963.1| TCP family transcription factor-like protein [Medicago truncatula]
           gi|357445449|ref|XP_003593002.1| TCP family
           transcription factor-like protein [Medicago truncatula]
           gi|355482011|gb|AES63214.1| TCP family transcription
           factor-like protein [Medicago truncatula]
           gi|355482050|gb|AES63253.1| TCP family transcription
           factor-like protein [Medicago truncatula]
          Length = 487

 Score =  130 bits (328), Expect = 3e-28
 Identities = 85/150 (56%), Positives = 90/150 (60%), Gaps = 10/150 (6%)
 Frame = +3

Query: 528 FDGRSSPFNMGSIS-IQAGLSPTSLNPQTGXXXXXXXXXXXXXXXXXXXXXXXXXIDASL 704
           FDGR SPF MGSIS IQ   + +  N  +                          IDASL
Sbjct: 42  FDGRPSPFIMGSISNIQPSSNSSPSNSSSSSASASASASAPTQHL----------IDASL 91

Query: 705 AMVTRSDSLTLTDPSKKP-----STQQTQTGA----KRSTKDRHTKVDGRGRRIRMPATC 857
           A+ TRS+   L D S        ST  T T      KRSTKDRHTKVDGRGRRIRMPATC
Sbjct: 92  AIATRSEP-PLPDVSNNQIQPFSSTSTTVTAVANPPKRSTKDRHTKVDGRGRRIRMPATC 150

Query: 858 AARVFQLTRELGHKSDGETIEWLLQQAEPA 947
           AARVFQLTRELGHKSDGETIEWLLQQAEPA
Sbjct: 151 AARVFQLTRELGHKSDGETIEWLLQQAEPA 180


>ref|XP_004173314.1| PREDICTED: LOW QUALITY PROTEIN: transcription factor TCP8-like,
           partial [Cucumis sativus]
          Length = 486

 Score =  130 bits (326), Expect = 6e-28
 Identities = 65/86 (75%), Positives = 70/86 (81%)
 Frame = +3

Query: 690 IDASLAMVTRSDSLTLTDPSKKPSTQQTQTGAKRSTKDRHTKVDGRGRRIRMPATCAARV 869
           +DASL + TRSD+    DPS + ST       KRSTKDRHTKV+GRGRRIRMPATCAAR 
Sbjct: 100 LDASLVIATRSDTTAAADPSPR-STSTANAANKRSTKDRHTKVEGRGRRIRMPATCAARX 158

Query: 870 FQLTRELGHKSDGETIEWLLQQAEPA 947
           FQLTRELGHKSDGETIEWLLQQAEPA
Sbjct: 159 FQLTRELGHKSDGETIEWLLQQAEPA 184


>ref|NP_001234831.1| TCP transcription factor 11 [Solanum lycopersicum]
           gi|306416833|gb|ADM87260.1| TCP transcription factor 11
           [Solanum lycopersicum]
          Length = 523

 Score =  129 bits (325), Expect = 8e-28
 Identities = 71/94 (75%), Positives = 75/94 (79%), Gaps = 8/94 (8%)
 Frame = +3

Query: 690 IDASLAMVTRSDSLTLTDPSKKP--STQQTQT------GAKRSTKDRHTKVDGRGRRIRM 845
           +DASLA+ TRSD  TL DP+KK   + QQTQ         KR TKDRHTKVDGRGRRIRM
Sbjct: 101 VDASLAIATRSD--TLVDPNKKSQLAIQQTQPVQPQQPPPKRQTKDRHTKVDGRGRRIRM 158

Query: 846 PATCAARVFQLTRELGHKSDGETIEWLLQQAEPA 947
           PA CAARVFQLTRELGHKSDGETIEWLLQQAEPA
Sbjct: 159 PAACAARVFQLTRELGHKSDGETIEWLLQQAEPA 192


>ref|XP_002529010.1| transcription factor, putative [Ricinus communis]
           gi|223531550|gb|EEF33380.1| transcription factor,
           putative [Ricinus communis]
          Length = 546

 Score =  129 bits (325), Expect = 8e-28
 Identities = 83/172 (48%), Positives = 92/172 (53%), Gaps = 32/172 (18%)
 Frame = +3

Query: 528 FDGRSSPFN----MGSISIQAGLS-------------------------PTSLNPQTGXX 620
           FDGR  P      MGSISIQAGLS                         PT+    +   
Sbjct: 39  FDGRGPPSQGGPFMGSISIQAGLSRTSNPLHHHQQQQQQQQQHNLASSTPTTATTGSTPS 98

Query: 621 XXXXXXXXXXXXXXXXXXXXXXXIDASLAMVTRSD---SLTLTDPSKKPSTQQTQTGAKR 791
                                  +DASLA+ TRS    S+  +  +   +T    T AKR
Sbjct: 99  TSLSSSTSSTSASTSSAPTTPHLVDASLAIATRSGPSLSIVTSTATTTTATAAAATPAKR 158

Query: 792 STKDRHTKVDGRGRRIRMPATCAARVFQLTRELGHKSDGETIEWLLQQAEPA 947
           STKDRHTKVDGRGRRIRMPATCAARVFQLTRELGHKSDGETIEWLL+QAEPA
Sbjct: 159 STKDRHTKVDGRGRRIRMPATCAARVFQLTRELGHKSDGETIEWLLRQAEPA 210


Top