BLASTX nr result

ID: Panax21_contig00026280 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00026280
         (415 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634615.1| PREDICTED: TMV resistance protein N-like [Vi...   111   7e-23
emb|CAN68108.1| hypothetical protein VITISV_013549 [Vitis vinifera]   111   7e-23
emb|CAN82909.1| hypothetical protein VITISV_025072 [Vitis vinifera]   110   9e-23
ref|XP_003634611.1| PREDICTED: TMV resistance protein N-like, pa...   109   3e-22
ref|XP_002277166.2| PREDICTED: TMV resistance protein N-like [Vi...   100   1e-19

>ref|XP_003634615.1| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1180

 Score =  111 bits (277), Expect = 7e-23
 Identities = 60/136 (44%), Positives = 79/136 (58%), Gaps = 1/136 (0%)
 Frame = -3

Query: 407  QNLKILNVSHSPFLKTTPDFXXXXXXXXXXLRNCSSLEQVHPSIGLLSKLSHLDLNGCFN 228
            + LK + +SHS  L  TPDF          L  C+SL ++HPSIG L +L  L+L GC  
Sbjct: 657  EKLKFIKLSHSQHLTKTPDFSAAPKLRRIILNGCTSLVKLHPSIGALKELIFLNLEGCSK 716

Query: 227  LNQLPEQL-GNLEGLEKLDASGANIEQISDSIGHLYKLVELNLEGCRNLRTLPSTICHLT 51
            L + PE + GNLE L  +   G  I ++  SIG L +LV LNL  C+ L +LP +IC L 
Sbjct: 717  LEKFPEVVQGNLEDLSGISLEGTAIRELPSSIGGLNRLVLLNLRNCKKLASLPQSICELI 776

Query: 50   SLEVLSLDSCLKLKNL 3
            SL+ L+L  C KLK L
Sbjct: 777  SLQTLTLSGCSKLKKL 792



 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 31/75 (41%), Positives = 42/75 (56%)
 Frame = -3

Query: 314 RNCSSLEQVHPSIGLLSKLSHLDLNGCFNLNQLPEQLGNLEGLEKLDASGANIEQISDSI 135
           RNC  L  +  SI  L  L  L L+GC  L +LP+ LG L+ L +L   G  I+++  SI
Sbjct: 760 RNCKKLASLPQSICELISLQTLTLSGCSKLKKLPDDLGRLQCLVELHVDGTGIKEVPSSI 819

Query: 134 GHLYKLVELNLEGCR 90
             L  L EL+L GC+
Sbjct: 820 NLLTNLQELSLAGCK 834


>emb|CAN68108.1| hypothetical protein VITISV_013549 [Vitis vinifera]
          Length = 1236

 Score =  111 bits (277), Expect = 7e-23
 Identities = 60/136 (44%), Positives = 79/136 (58%), Gaps = 1/136 (0%)
 Frame = -3

Query: 407  QNLKILNVSHSPFLKTTPDFXXXXXXXXXXLRNCSSLEQVHPSIGLLSKLSHLDLNGCFN 228
            + LK + +SHS  L  TPDF          L  C+SL ++HPSIG L +L  L+L GC  
Sbjct: 625  EKLKFIKLSHSQHLTKTPDFSAAPKLRRIILNGCTSLVKLHPSIGALKELIFLNLEGCSK 684

Query: 227  LNQLPEQL-GNLEGLEKLDASGANIEQISDSIGHLYKLVELNLEGCRNLRTLPSTICHLT 51
            L + PE + GNLE L  +   G  I ++  SIG L +LV LNL  C+ L +LP +IC L 
Sbjct: 685  LEKFPEVVQGNLEDLSGISLEGTAIRELPSSIGGLNRLVLLNLRNCKKLASLPQSICELI 744

Query: 50   SLEVLSLDSCLKLKNL 3
            SL+ L+L  C KLK L
Sbjct: 745  SLQTLTLSGCSKLKKL 760



 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 31/75 (41%), Positives = 42/75 (56%)
 Frame = -3

Query: 314 RNCSSLEQVHPSIGLLSKLSHLDLNGCFNLNQLPEQLGNLEGLEKLDASGANIEQISDSI 135
           RNC  L  +  SI  L  L  L L+GC  L +LP+ LG L+ L +L   G  I+++  SI
Sbjct: 728 RNCKKLASLPQSICELISLQTLTLSGCSKLKKLPDDLGRLQCLVELHVDGTGIKEVPSSI 787

Query: 134 GHLYKLVELNLEGCR 90
             L  L EL+L GC+
Sbjct: 788 NLLTNLQELSLAGCK 802


>emb|CAN82909.1| hypothetical protein VITISV_025072 [Vitis vinifera]
          Length = 1177

 Score =  110 bits (276), Expect = 9e-23
 Identities = 60/136 (44%), Positives = 78/136 (57%), Gaps = 1/136 (0%)
 Frame = -3

Query: 407  QNLKILNVSHSPFLKTTPDFXXXXXXXXXXLRNCSSLEQVHPSIGLLSKLSHLDLNGCFN 228
            + LK + +SHS  L  TPDF          L  C+SL ++HPSIG L +L  L+L GC  
Sbjct: 658  EKLKFIKLSHSQHLTKTPDFSAAPKLRRIILNGCTSLVKLHPSIGALKELIFLNLEGCSK 717

Query: 227  LNQLPEQL-GNLEGLEKLDASGANIEQISDSIGHLYKLVELNLEGCRNLRTLPSTICHLT 51
            L + PE + GNLE L  +   G  I ++  SIG L +LV LNL  C  L +LP +IC L 
Sbjct: 718  LEKFPEVVQGNLEDLSGISLEGTAIRELPSSIGSLNRLVLLNLRNCEKLASLPQSICELI 777

Query: 50   SLEVLSLDSCLKLKNL 3
            SL+ L+L  C KLK L
Sbjct: 778  SLQTLTLSGCSKLKKL 793



 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 40/114 (35%), Positives = 57/114 (50%), Gaps = 16/114 (14%)
 Frame = -3

Query: 314  RNCSSLEQVHPSIGLLSKLSHLDLNGCFNLNQLPEQLGNLEGLEKLDASGANIEQISDSI 135
            RNC  L  +  SI  L  L  L L+GC  L +LP+ LG L+ L +L+  G  I++++ SI
Sbjct: 761  RNCEKLASLPQSICELISLQTLTLSGCSKLKKLPDDLGRLQCLVELNVDGTGIKEVTSSI 820

Query: 134  GHLYKLVELNLEGC-------RNLRTLPST---------ICHLTSLEVLSLDSC 21
              L  L  L+L GC       RNL +  S+         +  L SL+ L+L  C
Sbjct: 821  NLLTNLEALSLAGCKGGGSKSRNLISFRSSPAAPLQLPFLSGLYSLKSLNLSDC 874


>ref|XP_003634611.1| PREDICTED: TMV resistance protein N-like, partial [Vitis vinifera]
          Length = 824

 Score =  109 bits (272), Expect = 3e-22
 Identities = 59/136 (43%), Positives = 78/136 (57%), Gaps = 1/136 (0%)
 Frame = -3

Query: 407 QNLKILNVSHSPFLKTTPDFXXXXXXXXXXLRNCSSLEQVHPSIGLLSKLSHLDLNGCFN 228
           + LK + +SHS  L  TPDF          L  C+SL ++HPSIG L +L   +L GC  
Sbjct: 297 KKLKFIKLSHSQHLTKTPDFSAAPKLRRIILNGCTSLVKLHPSIGALKELIFPNLEGCSK 356

Query: 227 LNQLPEQL-GNLEGLEKLDASGANIEQISDSIGHLYKLVELNLEGCRNLRTLPSTICHLT 51
           L + PE + GNLE L ++   G  I ++  SIG L +LV LNL  C  L +LP +IC L 
Sbjct: 357 LEKFPEVVQGNLENLSRISFEGTAIRELPSSIGSLNRLVLLNLRNCEKLASLPQSICELI 416

Query: 50  SLEVLSLDSCLKLKNL 3
           SL+ L+L  C KLK L
Sbjct: 417 SLQTLTLSGCSKLKKL 432



 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 40/114 (35%), Positives = 57/114 (50%), Gaps = 16/114 (14%)
 Frame = -3

Query: 314 RNCSSLEQVHPSIGLLSKLSHLDLNGCFNLNQLPEQLGNLEGLEKLDASGANIEQISDSI 135
           RNC  L  +  SI  L  L  L L+GC  L +LP+ LG L+ L +L+  G  I++++ SI
Sbjct: 400 RNCEKLASLPQSICELISLQTLTLSGCSKLKKLPDDLGRLQCLAELNVDGTGIKEVTSSI 459

Query: 134 GHLYKLVELNLEGC-------RNLRTLPST---------ICHLTSLEVLSLDSC 21
             L  L  L+L GC       RNL +  S+         +  L SL+ L+L  C
Sbjct: 460 NLLTNLEALSLAGCKGGGSKSRNLISFRSSPAAPLQLPFLSGLYSLKSLNLSDC 513


>ref|XP_002277166.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1250

 Score =  100 bits (249), Expect = 1e-19
 Identities = 58/159 (36%), Positives = 83/159 (52%), Gaps = 23/159 (14%)
 Frame = -3

Query: 410  LQNLKILNVSHSPFLKTTPDFXXXXXXXXXXLRNCSSLEQVHPSIGLLSKLSHLDL---- 243
            ++ L+ +++SHS +L  TPDF             C+ L +VH S+G+LSKL  L+L    
Sbjct: 649  MEKLECIDLSHSQYLVRTPDFSGIPNLERLIFEGCTDLREVHQSLGVLSKLIFLNLKDCK 708

Query: 242  -------------------NGCFNLNQLPEQLGNLEGLEKLDASGANIEQISDSIGHLYK 120
                               +GC  L+  PE L N+EGL +L   G  I+++  S+ HL  
Sbjct: 709  NLQCFPSSIELESLKVLILSGCSKLDNFPEILENMEGLRELFLDGTAIKELPLSVEHLNG 768

Query: 119  LVELNLEGCRNLRTLPSTICHLTSLEVLSLDSCLKLKNL 3
            LV LNL  C  L TLPS+IC+L SL  L+L  C +L+ L
Sbjct: 769  LVLLNLRNCERLITLPSSICNLKSLSTLTLSGCSQLEKL 807



 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 34/74 (45%), Positives = 42/74 (56%)
 Frame = -3

Query: 314 RNCSSLEQVHPSIGLLSKLSHLDLNGCFNLNQLPEQLGNLEGLEKLDASGANIEQISDSI 135
           RNC  L  +  SI  L  LS L L+GC  L +LPE LGNLE L +L A G+ + Q   SI
Sbjct: 775 RNCERLITLPSSICNLKSLSTLTLSGCSQLEKLPENLGNLECLVELVADGSAVIQPPSSI 834

Query: 134 GHLYKLVELNLEGC 93
             L  L  L+ +GC
Sbjct: 835 VLLRNLKVLSFQGC 848


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