BLASTX nr result

ID: Panax21_contig00026278 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00026278
         (1399 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003535326.1| PREDICTED: LOW QUALITY PROTEIN: ATP-dependen...   625   e-176
ref|XP_002330189.1| predicted protein [Populus trichocarpa] gi|2...   622   e-176
ref|XP_003591201.1| Bloom syndrome protein-like protein [Medicag...   622   e-176
ref|XP_002282715.1| PREDICTED: ATP-dependent DNA helicase Q-like...   617   e-174
gb|ABK96790.1| unknown [Populus trichocarpa x Populus deltoides]      615   e-174

>ref|XP_003535326.1| PREDICTED: LOW QUALITY PROTEIN: ATP-dependent DNA helicase Q-like
            1-like [Glycine max]
          Length = 612

 Score =  625 bits (1611), Expect = e-176
 Identities = 300/368 (81%), Positives = 332/368 (90%)
 Frame = -3

Query: 1397 YQLPATMRPGVTIVISPLLSLIQDQIITLNLKFGIPATFLNXXXXXXXXXAVLQDLRSDK 1218
            YQLPAT++PGVT+V+SPLLSLIQDQIITLNLKFGIP+TFLN         AVLQ+LR DK
Sbjct: 242  YQLPATLQPGVTVVVSPLLSLIQDQIITLNLKFGIPSTFLNSQQTASQVTAVLQELRKDK 301

Query: 1217 PSSKLLYVTPERIAGNLSFQDVLKSLHRKGQLAGFVVDEAHCVSQWGHDFRPDYRVLGCL 1038
            PS KLLYVTPERIAGN SF ++LK +H+KGQLAGFVVDEAHCVSQWGHDFRPDYR LG L
Sbjct: 302  PSCKLLYVTPERIAGNQSFLEILKFMHQKGQLAGFVVDEAHCVSQWGHDFRPDYRGLGSL 361

Query: 1037 KQNFPDVPLMALTATATQSVREDIVNALRIPQALVLETSFDRPNLKYEVTGKTKEPLKQL 858
            K +FPDVP+MALTATAT +VREDI+ ALRIP ALVLE SFDRPNLKYEV  KTKEPLKQL
Sbjct: 362  KLHFPDVPVMALTATATHAVREDILKALRIPHALVLERSFDRPNLKYEVIAKTKEPLKQL 421

Query: 857  GELLLNRFRNVCGIVYCLSKNECVEVSKYLNEKCKIKTVYYHAGLAARQRIVVQQKWHTG 678
            G+LL++RFRN CGIVYCLSK+ECVEVSK+LNEKCKIKTVYYHAGLAARQR+ VQ+KW+ G
Sbjct: 422  GQLLIDRFRNQCGIVYCLSKSECVEVSKFLNEKCKIKTVYYHAGLAARQRVAVQKKWYDG 481

Query: 677  EVHVVCATIAFGMGIDKPDVRFVVHNTMSKSIESYYQESGRAGRDNLPSVCVALYQKKDF 498
            EVH+VCATIAFGMGIDKPDVRFV+HNTMSKSIESYYQESGRAGRDN PSVC+ALYQKKDF
Sbjct: 482  EVHIVCATIAFGMGIDKPDVRFVIHNTMSKSIESYYQESGRAGRDNFPSVCIALYQKKDF 541

Query: 497  SRVVCMLRSGQGGKTRTFKLAMDQAKKMQQYCELKVECRRQNLLEHFGESFDRNACKYGS 318
            SRVVCM+R+GQG K  +FK AM QAKKMQ+YCE+K ECRRQ LL+HFGESFDR  CKYGS
Sbjct: 542  SRVVCMIRNGQGYKKESFKTAMAQAKKMQEYCEIKAECRRQTLLKHFGESFDRKDCKYGS 601

Query: 317  NPCDNCLK 294
            +PCDNCLK
Sbjct: 602  SPCDNCLK 609


>ref|XP_002330189.1| predicted protein [Populus trichocarpa] gi|222871645|gb|EEF08776.1|
            predicted protein [Populus trichocarpa]
          Length = 588

 Score =  622 bits (1604), Expect = e-176
 Identities = 302/368 (82%), Positives = 330/368 (89%)
 Frame = -3

Query: 1397 YQLPATMRPGVTIVISPLLSLIQDQIITLNLKFGIPATFLNXXXXXXXXXAVLQDLRSDK 1218
            YQLPAT++PGVT+VISPLLSLIQDQIITLNLKFGIPATFLN         A+LQ+LR DK
Sbjct: 218  YQLPATLKPGVTVVISPLLSLIQDQIITLNLKFGIPATFLNSQQTSAQAAAILQELRHDK 277

Query: 1217 PSSKLLYVTPERIAGNLSFQDVLKSLHRKGQLAGFVVDEAHCVSQWGHDFRPDYRVLGCL 1038
            PS KLLYVTPERIAGN +F ++LK LH KGQLAGFVVDEAHCVSQWGHDFRPDY+ LGCL
Sbjct: 278  PSCKLLYVTPERIAGNPAFLEILKCLHLKGQLAGFVVDEAHCVSQWGHDFRPDYKRLGCL 337

Query: 1037 KQNFPDVPLMALTATATQSVREDIVNALRIPQALVLETSFDRPNLKYEVTGKTKEPLKQL 858
            KQNFP VP+MALTATAT SVREDI+  LRIP ALVLETSFDRPNLKYEV GKTKE LKQL
Sbjct: 338  KQNFPVVPVMALTATATHSVREDILKTLRIPGALVLETSFDRPNLKYEVIGKTKESLKQL 397

Query: 857  GELLLNRFRNVCGIVYCLSKNECVEVSKYLNEKCKIKTVYYHAGLAARQRIVVQQKWHTG 678
            G+LL +RF+N CGIVYCLSKNECVEVSK+LNEKCKIK VYYHAGL ARQR+ VQ+KWHTG
Sbjct: 398  GDLLRDRFKNQCGIVYCLSKNECVEVSKFLNEKCKIKAVYYHAGLGARQRVDVQRKWHTG 457

Query: 677  EVHVVCATIAFGMGIDKPDVRFVVHNTMSKSIESYYQESGRAGRDNLPSVCVALYQKKDF 498
            EVH+VCATIAFGMGIDKPDVRFV+HNT+SKSIESYYQESGRAGRD+ P+ C+ALYQKKDF
Sbjct: 458  EVHIVCATIAFGMGIDKPDVRFVIHNTLSKSIESYYQESGRAGRDSHPATCIALYQKKDF 517

Query: 497  SRVVCMLRSGQGGKTRTFKLAMDQAKKMQQYCELKVECRRQNLLEHFGESFDRNACKYGS 318
            SRVVCMLRSGQG K  +FK AM QA+KM+ YCELKVECRRQ LLEHFGESFD+ ACK+GS
Sbjct: 518  SRVVCMLRSGQGYKRESFKPAMAQAQKMKSYCELKVECRRQVLLEHFGESFDQKACKFGS 577

Query: 317  NPCDNCLK 294
            NPCDNCLK
Sbjct: 578  NPCDNCLK 585


>ref|XP_003591201.1| Bloom syndrome protein-like protein [Medicago truncatula]
            gi|355480249|gb|AES61452.1| Bloom syndrome protein-like
            protein [Medicago truncatula]
          Length = 603

 Score =  622 bits (1603), Expect = e-176
 Identities = 301/371 (81%), Positives = 330/371 (88%)
 Frame = -3

Query: 1397 YQLPATMRPGVTIVISPLLSLIQDQIITLNLKFGIPATFLNXXXXXXXXXAVLQDLRSDK 1218
            YQLPAT++PGVT+V+SPLLSLIQDQIITLNLKFGIPATFLN         AVLQ+LR DK
Sbjct: 233  YQLPATLQPGVTVVVSPLLSLIQDQIITLNLKFGIPATFLNSQQNASQAAAVLQELRKDK 292

Query: 1217 PSSKLLYVTPERIAGNLSFQDVLKSLHRKGQLAGFVVDEAHCVSQWGHDFRPDYRVLGCL 1038
            PS KLLYVTPERIAGN SF  +LK +H+KGQLAGFVVDEAHCVSQWGHDFRPDYR LG L
Sbjct: 293  PSCKLLYVTPERIAGNQSFVGILKCMHQKGQLAGFVVDEAHCVSQWGHDFRPDYRGLGSL 352

Query: 1037 KQNFPDVPLMALTATATQSVREDIVNALRIPQALVLETSFDRPNLKYEVTGKTKEPLKQL 858
            KQNFP VP+MALTATAT  VREDI+NALRIP A+VLE SFDRPNLKYEV  KTKEPLKQL
Sbjct: 353  KQNFPRVPVMALTATATHPVREDILNALRIPHAIVLERSFDRPNLKYEVIVKTKEPLKQL 412

Query: 857  GELLLNRFRNVCGIVYCLSKNECVEVSKYLNEKCKIKTVYYHAGLAARQRIVVQQKWHTG 678
            G+LL++RF++ CGIVYCLSK+ECV+VSK+LNEKCKIK  YYHAGLAARQR+ VQ+KWH G
Sbjct: 413  GQLLMDRFKSQCGIVYCLSKSECVDVSKFLNEKCKIKAAYYHAGLAARQRVAVQKKWHDG 472

Query: 677  EVHVVCATIAFGMGIDKPDVRFVVHNTMSKSIESYYQESGRAGRDNLPSVCVALYQKKDF 498
            EVH+VCATIAFGMGIDK DVRFV+HNTMSKSIESYYQESGRAGRDNLP+VC+ALYQKKDF
Sbjct: 473  EVHIVCATIAFGMGIDKADVRFVIHNTMSKSIESYYQESGRAGRDNLPAVCIALYQKKDF 532

Query: 497  SRVVCMLRSGQGGKTRTFKLAMDQAKKMQQYCELKVECRRQNLLEHFGESFDRNACKYGS 318
            SRVVCM+R+GQG K  +FK AM QAKKMQQYCELK ECRRQ LLEHFGESFDR  CKYGS
Sbjct: 533  SRVVCMIRNGQGYKKESFKTAMAQAKKMQQYCELKDECRRQTLLEHFGESFDRKNCKYGS 592

Query: 317  NPCDNCLKAPS 285
            +PCDNCLK  S
Sbjct: 593  SPCDNCLKTAS 603


>ref|XP_002282715.1| PREDICTED: ATP-dependent DNA helicase Q-like 1-like [Vitis vinifera]
          Length = 602

 Score =  617 bits (1591), Expect = e-174
 Identities = 297/368 (80%), Positives = 332/368 (90%)
 Frame = -3

Query: 1397 YQLPATMRPGVTIVISPLLSLIQDQIITLNLKFGIPATFLNXXXXXXXXXAVLQDLRSDK 1218
            YQLPAT++PGVT+V+ PLLSLIQDQIITLNL FGIPATFL+         AVL++LR DK
Sbjct: 234  YQLPATLQPGVTVVVCPLLSLIQDQIITLNLNFGIPATFLSSQQTASQAAAVLKELRKDK 293

Query: 1217 PSSKLLYVTPERIAGNLSFQDVLKSLHRKGQLAGFVVDEAHCVSQWGHDFRPDYRVLGCL 1038
            PS KLLYVTPERIAGN +F ++LKSLH KGQLAGFVVDEAHCVSQWGHDFRPDYR LGCL
Sbjct: 294  PSCKLLYVTPERIAGNSTFFEILKSLHWKGQLAGFVVDEAHCVSQWGHDFRPDYRELGCL 353

Query: 1037 KQNFPDVPLMALTATATQSVREDIVNALRIPQALVLETSFDRPNLKYEVTGKTKEPLKQL 858
            KQNFPDVP+MALTATATQ VR+DI+N+LRIP ALVLETSFDR NLKYEV GKTKEPLKQL
Sbjct: 354  KQNFPDVPVMALTATATQPVRKDILNSLRIPHALVLETSFDRSNLKYEVIGKTKEPLKQL 413

Query: 857  GELLLNRFRNVCGIVYCLSKNECVEVSKYLNEKCKIKTVYYHAGLAARQRIVVQQKWHTG 678
            G+LL +RF+N+CGIVYCLSK+EC EVSK+LN KCKIKTVYYHAGL+ARQRI VQ+KWHTG
Sbjct: 414  GQLLKDRFKNLCGIVYCLSKSECAEVSKFLNGKCKIKTVYYHAGLSARQRIDVQKKWHTG 473

Query: 677  EVHVVCATIAFGMGIDKPDVRFVVHNTMSKSIESYYQESGRAGRDNLPSVCVALYQKKDF 498
            +VH++CATIAFGMGI+KP+VRFV+HNTMSKSIE+YYQESGRAGRD+LP+VC+ALYQKKDF
Sbjct: 474  KVHIICATIAFGMGINKPNVRFVIHNTMSKSIENYYQESGRAGRDDLPAVCMALYQKKDF 533

Query: 497  SRVVCMLRSGQGGKTRTFKLAMDQAKKMQQYCELKVECRRQNLLEHFGESFDRNACKYGS 318
            SRVVCMLR+G G K+ TFK AM QA+KMQQYCELK ECRRQ LLEHFGES DR ACK G 
Sbjct: 534  SRVVCMLRNGHGCKSETFKEAMTQARKMQQYCELKTECRRQTLLEHFGESLDRKACKNGC 593

Query: 317  NPCDNCLK 294
            NPCDNCLK
Sbjct: 594  NPCDNCLK 601


>gb|ABK96790.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 617

 Score =  615 bits (1587), Expect = e-174
 Identities = 299/368 (81%), Positives = 328/368 (89%)
 Frame = -3

Query: 1397 YQLPATMRPGVTIVISPLLSLIQDQIITLNLKFGIPATFLNXXXXXXXXXAVLQDLRSDK 1218
            YQLPAT++PGVT+VISPLLSLIQDQIITLNLKFGI ATFLN         A+LQ+LR DK
Sbjct: 247  YQLPATLKPGVTVVISPLLSLIQDQIITLNLKFGIRATFLNSQQTSAQAAAILQELRKDK 306

Query: 1217 PSSKLLYVTPERIAGNLSFQDVLKSLHRKGQLAGFVVDEAHCVSQWGHDFRPDYRVLGCL 1038
            PS KLLYVTPERIAGN +F ++LK LH KGQLAGFVVDEAHCVSQWGHDFRPDY+ LGCL
Sbjct: 307  PSCKLLYVTPERIAGNPAFLEILKCLHLKGQLAGFVVDEAHCVSQWGHDFRPDYKRLGCL 366

Query: 1037 KQNFPDVPLMALTATATQSVREDIVNALRIPQALVLETSFDRPNLKYEVTGKTKEPLKQL 858
            KQNFP VP+MALTATAT SVREDI+  LRIP ALVLETSFDRPNLKYEV GKTKE LKQL
Sbjct: 367  KQNFPVVPVMALTATATHSVREDILKTLRIPGALVLETSFDRPNLKYEVIGKTKESLKQL 426

Query: 857  GELLLNRFRNVCGIVYCLSKNECVEVSKYLNEKCKIKTVYYHAGLAARQRIVVQQKWHTG 678
            G+LL +RF+N CGIVYCLSKNECVEVSK+LNEKCKIK VYYHAGL ARQR+ VQ+KWHTG
Sbjct: 427  GDLLRDRFKNQCGIVYCLSKNECVEVSKFLNEKCKIKAVYYHAGLGARQRVDVQRKWHTG 486

Query: 677  EVHVVCATIAFGMGIDKPDVRFVVHNTMSKSIESYYQESGRAGRDNLPSVCVALYQKKDF 498
            EVH+VCATIAFGMGIDKPDVRFV+HNT+SKSIESYYQESGRAGRD+ P+ C+ALYQKKDF
Sbjct: 487  EVHIVCATIAFGMGIDKPDVRFVIHNTLSKSIESYYQESGRAGRDSHPATCIALYQKKDF 546

Query: 497  SRVVCMLRSGQGGKTRTFKLAMDQAKKMQQYCELKVECRRQNLLEHFGESFDRNACKYGS 318
            SRVVCMLRSGQG K  +FK AM QA+KM+ YCELK ECRRQ LLEHFGESFD+ ACK+GS
Sbjct: 547  SRVVCMLRSGQGYKRESFKPAMAQAQKMKSYCELKAECRRQVLLEHFGESFDQKACKFGS 606

Query: 317  NPCDNCLK 294
            +PCDNCLK
Sbjct: 607  HPCDNCLK 614


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