BLASTX nr result

ID: Panax21_contig00026276 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00026276
         (1646 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279399.2| PREDICTED: pentatricopeptide repeat-containi...   642   0.0  
emb|CBI26594.3| unnamed protein product [Vitis vinifera]              642   0.0  
emb|CAN64701.1| hypothetical protein VITISV_037299 [Vitis vinifera]   635   e-179
ref|XP_003536907.1| PREDICTED: pentatricopeptide repeat-containi...   599   e-169
ref|XP_004148903.1| PREDICTED: pentatricopeptide repeat-containi...   595   e-167

>ref|XP_002279399.2| PREDICTED: pentatricopeptide repeat-containing protein At4g02820,
            mitochondrial-like [Vitis vinifera]
          Length = 642

 Score =  642 bits (1655), Expect = 0.0
 Identities = 317/491 (64%), Positives = 385/491 (78%)
 Frame = +1

Query: 82   EAAAKPTMSEGATNSAAKSGGRDTLGRRLLSLIYTKRSAVIALRKWKEEGHIVRKYEINR 261
            +A  KP  S+G + S+    GRDTLGRRLLSL+Y KRSAVIA+++W+EEGH VRKYE+NR
Sbjct: 151  KAVVKPKTSDGNSTSS----GRDTLGRRLLSLVYAKRSAVIAIQRWREEGHTVRKYELNR 206

Query: 262  NVXXXXXXXXXXHALELCEWMKTQQDIKLLEGDYAVHLDLIAKLRGLNSAEKFFEDLPDQ 441
             V          HALE+CEWM  Q DIKLL GDYAVHLDLIAK+RGL SAEKFFEDL D+
Sbjct: 207  IVRELRKLKRYKHALEICEWMTKQHDIKLLAGDYAVHLDLIAKIRGLASAEKFFEDLSDK 266

Query: 442  MKGQLTCTALLHNYVQHKDSSKAEGLMGKMLECGLVKNPLPYNHMISLYISNGXXXXXXX 621
            MKGQ TCTALLH YVQ+K S KAE LM KM ECG +K PLPYNHMISLYIS+G       
Sbjct: 267  MKGQPTCTALLHTYVQNKVSEKAEALMEKMSECGFLKCPLPYNHMISLYISDGQLEKVPG 326

Query: 622  XXXXXXXNTSPDILTYNLLLTVCASQDDIDTAEKVFLELEKGKVDPDWVTYSTLANIYIK 801
                   NTSPD++TYNL LTVCASQ+D++TAEKV LE++K K+DPDWVTYS+L N+YIK
Sbjct: 327  MIQELKKNTSPDVVTYNLWLTVCASQNDVETAEKVLLEIKKAKIDPDWVTYSSLTNLYIK 386

Query: 802  NSLHEKATATLKEMEKKFSRKVRVAYASLISLHTSLEKKNEVHRIWKKLKSTFRKLNDAE 981
              L +KA  TL EMEK+ SRK R+AY+SLISLHT+++ K+ VHRIWKKLKS F K+NDAE
Sbjct: 387  KGLLDKAATTLNEMEKRTSRKGRIAYSSLISLHTNMQDKDGVHRIWKKLKSIFHKMNDAE 446

Query: 982  YTSMIYSXXXXXXXXXXXXVYNDWESVSSTNDCRIPNLLLAAYINKNQIEMAENFHKRMV 1161
            YT MI S            +Y++W SVS T D R+PN+LLAAYINKN++EMAE F+ +MV
Sbjct: 447  YTCMISSLVKLGEFEEAENLYSEWTSVSPTGDSRVPNILLAAYINKNEMEMAEKFYNQMV 506

Query: 1162 NKGIAPSYTTWELLTWGYLKQNDMEKGLDCFKKTVGSVKKWDFDGEMVQELFRVLQEQKN 1341
             +GI PSYTTWELLTWGYLK+  MEK LD F+K VGSVKKW+ D ++V+E+++ L+EQ N
Sbjct: 507  ERGITPSYTTWELLTWGYLKKKQMEKVLDYFEKAVGSVKKWNPDEKLVREVYKNLEEQGN 566

Query: 1342 VEGAEQLLVILRRAGHLNTEIYNALLRTYAKASKMPLIISERMKKDKVQLDDETHELIKL 1521
            +EGAE++LVILR+AGH++TEIYN LLR YAKA KMPLI++E MKKDKV++D+ETH LIK 
Sbjct: 567  IEGAEKVLVILRKAGHVSTEIYNWLLRAYAKAGKMPLIVAEWMKKDKVEMDEETHRLIKE 626

Query: 1522 TSKMCISDASS 1554
            TSKMC+S+ SS
Sbjct: 627  TSKMCVSEVSS 637


>emb|CBI26594.3| unnamed protein product [Vitis vinifera]
          Length = 529

 Score =  642 bits (1655), Expect = 0.0
 Identities = 317/491 (64%), Positives = 385/491 (78%)
 Frame = +1

Query: 82   EAAAKPTMSEGATNSAAKSGGRDTLGRRLLSLIYTKRSAVIALRKWKEEGHIVRKYEINR 261
            +A  KP  S+G + S+    GRDTLGRRLLSL+Y KRSAVIA+++W+EEGH VRKYE+NR
Sbjct: 38   KAVVKPKTSDGNSTSS----GRDTLGRRLLSLVYAKRSAVIAIQRWREEGHTVRKYELNR 93

Query: 262  NVXXXXXXXXXXHALELCEWMKTQQDIKLLEGDYAVHLDLIAKLRGLNSAEKFFEDLPDQ 441
             V          HALE+CEWM  Q DIKLL GDYAVHLDLIAK+RGL SAEKFFEDL D+
Sbjct: 94   IVRELRKLKRYKHALEICEWMTKQHDIKLLAGDYAVHLDLIAKIRGLASAEKFFEDLSDK 153

Query: 442  MKGQLTCTALLHNYVQHKDSSKAEGLMGKMLECGLVKNPLPYNHMISLYISNGXXXXXXX 621
            MKGQ TCTALLH YVQ+K S KAE LM KM ECG +K PLPYNHMISLYIS+G       
Sbjct: 154  MKGQPTCTALLHTYVQNKVSEKAEALMEKMSECGFLKCPLPYNHMISLYISDGQLEKVPG 213

Query: 622  XXXXXXXNTSPDILTYNLLLTVCASQDDIDTAEKVFLELEKGKVDPDWVTYSTLANIYIK 801
                   NTSPD++TYNL LTVCASQ+D++TAEKV LE++K K+DPDWVTYS+L N+YIK
Sbjct: 214  MIQELKKNTSPDVVTYNLWLTVCASQNDVETAEKVLLEIKKAKIDPDWVTYSSLTNLYIK 273

Query: 802  NSLHEKATATLKEMEKKFSRKVRVAYASLISLHTSLEKKNEVHRIWKKLKSTFRKLNDAE 981
              L +KA  TL EMEK+ SRK R+AY+SLISLHT+++ K+ VHRIWKKLKS F K+NDAE
Sbjct: 274  KGLLDKAATTLNEMEKRTSRKGRIAYSSLISLHTNMQDKDGVHRIWKKLKSIFHKMNDAE 333

Query: 982  YTSMIYSXXXXXXXXXXXXVYNDWESVSSTNDCRIPNLLLAAYINKNQIEMAENFHKRMV 1161
            YT MI S            +Y++W SVS T D R+PN+LLAAYINKN++EMAE F+ +MV
Sbjct: 334  YTCMISSLVKLGEFEEAENLYSEWTSVSPTGDSRVPNILLAAYINKNEMEMAEKFYNQMV 393

Query: 1162 NKGIAPSYTTWELLTWGYLKQNDMEKGLDCFKKTVGSVKKWDFDGEMVQELFRVLQEQKN 1341
             +GI PSYTTWELLTWGYLK+  MEK LD F+K VGSVKKW+ D ++V+E+++ L+EQ N
Sbjct: 394  ERGITPSYTTWELLTWGYLKKKQMEKVLDYFEKAVGSVKKWNPDEKLVREVYKNLEEQGN 453

Query: 1342 VEGAEQLLVILRRAGHLNTEIYNALLRTYAKASKMPLIISERMKKDKVQLDDETHELIKL 1521
            +EGAE++LVILR+AGH++TEIYN LLR YAKA KMPLI++E MKKDKV++D+ETH LIK 
Sbjct: 454  IEGAEKVLVILRKAGHVSTEIYNWLLRAYAKAGKMPLIVAEWMKKDKVEMDEETHRLIKE 513

Query: 1522 TSKMCISDASS 1554
            TSKMC+S+ SS
Sbjct: 514  TSKMCVSEVSS 524


>emb|CAN64701.1| hypothetical protein VITISV_037299 [Vitis vinifera]
          Length = 1111

 Score =  635 bits (1638), Expect = e-179
 Identities = 314/485 (64%), Positives = 380/485 (78%)
 Frame = +1

Query: 82   EAAAKPTMSEGATNSAAKSGGRDTLGRRLLSLIYTKRSAVIALRKWKEEGHIVRKYEINR 261
            +A  KP  S+G + S+    GRDTLGRRLLSL+Y KRSAVIA+++W+EEGH VRKYE+NR
Sbjct: 38   KAVVKPKTSDGNSTSS----GRDTLGRRLLSLVYAKRSAVIAIQRWREEGHTVRKYELNR 93

Query: 262  NVXXXXXXXXXXHALELCEWMKTQQDIKLLEGDYAVHLDLIAKLRGLNSAEKFFEDLPDQ 441
             V          HALE+CEWM  Q DIKLL GDYAVHLDLIAK+RGL SAEKFFEDL D+
Sbjct: 94   IVRELRKLKRYKHALEICEWMTKQHDIKLLAGDYAVHLDLIAKIRGLASAEKFFEDLSDK 153

Query: 442  MKGQLTCTALLHNYVQHKDSSKAEGLMGKMLECGLVKNPLPYNHMISLYISNGXXXXXXX 621
            MKGQ TCTALLH YVQ+K S KAE LM KM ECG +K PLPYNHMISLYIS+G       
Sbjct: 154  MKGQPTCTALLHTYVQNKVSEKAEALMEKMSECGFLKCPLPYNHMISLYISDGQLEKVPG 213

Query: 622  XXXXXXXNTSPDILTYNLLLTVCASQDDIDTAEKVFLELEKGKVDPDWVTYSTLANIYIK 801
                   NTSPD++TYNL LTVCASQ+D++TAEKV LE++K K+DPDWVTYS+L N+YIK
Sbjct: 214  MIQELKKNTSPDVVTYNLWLTVCASQNDVETAEKVLLEIKKAKIDPDWVTYSSLTNLYIK 273

Query: 802  NSLHEKATATLKEMEKKFSRKVRVAYASLISLHTSLEKKNEVHRIWKKLKSTFRKLNDAE 981
              L +KA  TL EMEK+ SRK R+AY+SLISLHT+++ K+ VHRIWKKLKS F K+NDAE
Sbjct: 274  KGLLDKAATTLNEMEKRTSRKGRIAYSSLISLHTNMQDKDGVHRIWKKLKSIFHKMNDAE 333

Query: 982  YTSMIYSXXXXXXXXXXXXVYNDWESVSSTNDCRIPNLLLAAYINKNQIEMAENFHKRMV 1161
            YT MI S            +Y++W SVS T D R+PN+LLAAYINKN++EMAE F+ +MV
Sbjct: 334  YTCMISSLVKLGEFEEAENLYSEWTSVSPTGDSRVPNILLAAYINKNEMEMAEKFYNQMV 393

Query: 1162 NKGIAPSYTTWELLTWGYLKQNDMEKGLDCFKKTVGSVKKWDFDGEMVQELFRVLQEQKN 1341
             +GI PSYTTWELLTWGYLK+  MEK LD F+K VGSVKKW+ D ++V+E+++ L+EQ N
Sbjct: 394  ERGITPSYTTWELLTWGYLKKKQMEKVLDYFEKAVGSVKKWNPDEKLVREVYKNLEEQGN 453

Query: 1342 VEGAEQLLVILRRAGHLNTEIYNALLRTYAKASKMPLIISERMKKDKVQLDDETHELIKL 1521
            +EGAE++LVILR+AGH++TEIYN LLR YAKA KMPLI++E MKKDKV++D+ETH LIK 
Sbjct: 454  IEGAEKVLVILRKAGHVSTEIYNWLLRAYAKAGKMPLIVAEWMKKDKVEMDEETHRLIKE 513

Query: 1522 TSKMC 1536
            TSKMC
Sbjct: 514  TSKMC 518


>ref|XP_003536907.1| PREDICTED: pentatricopeptide repeat-containing protein At4g02820,
            mitochondrial-like [Glycine max]
          Length = 516

 Score =  599 bits (1544), Expect = e-169
 Identities = 298/502 (59%), Positives = 375/502 (74%), Gaps = 1/502 (0%)
 Frame = +1

Query: 61   HFSAEAVEAAAKPTMSEGATNSAAKSGGRDTLGRRLLSLIYTKRSAVIALRKWKEEGHIV 240
            HFSA A EA          + +A+ SGG DTLGRRLLSL+Y KRSAV+A+ KWKEEGH  
Sbjct: 23   HFSASA-EARV-------GSAAASSSGGGDTLGRRLLSLVYPKRSAVVAINKWKEEGHEP 74

Query: 241  -RKYEINRNVXXXXXXXXXXHALELCEWMKTQQDIKLLEGDYAVHLDLIAKLRGLNSAEK 417
             RKY++NR V          HALE+CEWM  Q+D+KL++GDYAVHLDLI K+RGLNSAEK
Sbjct: 75   PRKYQLNRIVRELRKDKRYKHALEVCEWMTLQKDMKLVQGDYAVHLDLITKVRGLNSAEK 134

Query: 418  FFEDLPDQMKGQLTCTALLHNYVQHKDSSKAEGLMGKMLECGLVKNPLPYNHMISLYISN 597
            FFEDLPD+M+G+ TC+ALLH YVQ+    KAE LM KM EC L+ NPLPYNHMISLYISN
Sbjct: 135  FFEDLPDRMRGKQTCSALLHAYVQNNLVDKAEALMLKMSECDLLINPLPYNHMISLYISN 194

Query: 598  GXXXXXXXXXXXXXXNTSPDILTYNLLLTVCASQDDIDTAEKVFLELEKGKVDPDWVTYS 777
            G              NTSPDI+T+NL L  CASQ+D++TAE+V LEL+K K+DPDWVTYS
Sbjct: 195  GKLEKVPKIIQELKMNTSPDIVTFNLWLAACASQNDVETAERVLLELKKAKIDPDWVTYS 254

Query: 778  TLANIYIKNSLHEKATATLKEMEKKFSRKVRVAYASLISLHTSLEKKNEVHRIWKKLKST 957
            TL N+YIKN+  EKA AT+KEME + SRK RVAY+SL+SLHT++  K++V+RIW+K+K++
Sbjct: 255  TLTNLYIKNASLEKAGATVKEMENRTSRKTRVAYSSLLSLHTNMGNKDDVNRIWEKMKAS 314

Query: 958  FRKLNDAEYTSMIYSXXXXXXXXXXXXVYNDWESVSSTNDCRIPNLLLAAYINKNQIEMA 1137
            FRK+ND EY  MI S            +Y +WESVS TND R+ N+LL +YIN++Q+EMA
Sbjct: 315  FRKMNDNEYICMISSLLKLGDFAGAEDLYREWESVSGTNDVRVSNILLGSYINQDQMEMA 374

Query: 1138 ENFHKRMVNKGIAPSYTTWELLTWGYLKQNDMEKGLDCFKKTVGSVKKWDFDGEMVQELF 1317
            E+F  ++V KG+ P YTTWEL TWGYLK+ D+EK LD F K + SV KW  D  +VQE F
Sbjct: 375  EDFCNQIVQKGVIPCYTTWELFTWGYLKRKDVEKFLDYFSKAISSVTKWSPDQRLVQEAF 434

Query: 1318 RVLQEQKNVEGAEQLLVILRRAGHLNTEIYNALLRTYAKASKMPLIISERMKKDKVQLDD 1497
            ++++EQ + +GAEQLLVILR AGH+NT IYN  L+TYA A KMP+I++ERM+KD V+LD+
Sbjct: 435  KIIEEQAHTKGAEQLLVILRNAGHVNTNIYNLFLKTYATAGKMPMIVAERMRKDNVKLDE 494

Query: 1498 ETHELIKLTSKMCISDASSCMS 1563
            ET  L+ LTSKMC+SD S  +S
Sbjct: 495  ETRRLLDLTSKMCVSDVSRILS 516


>ref|XP_004148903.1| PREDICTED: pentatricopeptide repeat-containing protein At4g02820,
            mitochondrial-like [Cucumis sativus]
            gi|449491586|ref|XP_004158945.1| PREDICTED:
            pentatricopeptide repeat-containing protein At4g02820,
            mitochondrial-like [Cucumis sativus]
          Length = 531

 Score =  595 bits (1533), Expect = e-167
 Identities = 294/502 (58%), Positives = 372/502 (74%), Gaps = 3/502 (0%)
 Frame = +1

Query: 64   FSAEAVEAAAKPTMSEGATNS---AAKSGGRDTLGRRLLSLIYTKRSAVIALRKWKEEGH 234
            FS EA  AA++ T  EGA  +   + K GGRDTLGRRL+SLI+ KRSAV A+RKW+EEG 
Sbjct: 17   FSGEASMAASENTALEGAAGTRVVSGKGGGRDTLGRRLMSLIFPKRSAVTAIRKWQEEGR 76

Query: 235  IVRKYEINRNVXXXXXXXXXXHALELCEWMKTQQDIKLLEGDYAVHLDLIAKLRGLNSAE 414
             VRKYE+NRNV          HALE+CEWM  Q+D++L+ GDYAVHLDLI K+RGLN AE
Sbjct: 77   TVRKYELNRNVRELRKLKRYKHALEVCEWMTLQKDMRLVPGDYAVHLDLICKIRGLNRAE 136

Query: 415  KFFEDLPDQMKGQLTCTALLHNYVQHKDSSKAEGLMGKMLECGLVKNPLPYNHMISLYIS 594
            KFFEDLPD+++ Q  CT+LLH YVQ+  S KAE LM KM ECG +K+PL +NHM+SL+IS
Sbjct: 137  KFFEDLPDKIREQSVCTSLLHAYVQNNLSEKAEALMEKMSECGFLKSPLSFNHMLSLHIS 196

Query: 595  NGXXXXXXXXXXXXXXNTSPDILTYNLLLTVCASQDDIDTAEKVFLELEKGKVDPDWVTY 774
            N               NT PD++TYNLLL VC  Q+D + AE +FLE++K K+ PDWV++
Sbjct: 197  NKQLEKVPALIEGLKKNTKPDVVTYNLLLNVCTLQNDTEAAENIFLEMKKTKIQPDWVSF 256

Query: 775  STLANIYIKNSLHEKATATLKEMEKKFSRKVRVAYASLISLHTSLEKKNEVHRIWKKLKS 954
            STLAN+Y KN L EKA ATLKEMEK   +  R++ +SL+SL+T+L  KNEV+RIWKKLKS
Sbjct: 257  STLANLYCKNQLTEKAAATLKEMEKMAFKSNRLSLSSLLSLYTNLGDKNEVYRIWKKLKS 316

Query: 955  TFRKLNDAEYTSMIYSXXXXXXXXXXXXVYNDWESVSSTNDCRIPNLLLAAYINKNQIEM 1134
            +FRK++D EY  MI S            +Y +WESVS T D R+ N++L AYI KNQIE 
Sbjct: 317  SFRKMSDREYMCMISSLVKLNELEEAEKLYTEWESVSGTRDTRVSNVMLGAYIKKNQIEQ 376

Query: 1135 AENFHKRMVNKGIAPSYTTWELLTWGYLKQNDMEKGLDCFKKTVGSVKKWDFDGEMVQEL 1314
            AE+F+ RM+ KG  PSYTTWELLTWGYLK+N MEK L  F+K V  VKKW+ D  +V+ +
Sbjct: 377  AESFYNRMLQKGTVPSYTTWELLTWGYLKENQMEKVLHFFRKAVNRVKKWNADERLVKGV 436

Query: 1315 FRVLQEQKNVEGAEQLLVILRRAGHLNTEIYNALLRTYAKASKMPLIISERMKKDKVQLD 1494
             + L+EQ N+ G EQLL+ILR AGH++TEIYN+LLRTYAKA KMPLI++ERM++D VQL+
Sbjct: 437  CKKLEEQGNINGVEQLLLILRNAGHVDTEIYNSLLRTYAKAGKMPLIVAERMERDNVQLN 496

Query: 1495 DETHELIKLTSKMCISDASSCM 1560
            DET EL++LTSKMC+S+ SS +
Sbjct: 497  DETRELLRLTSKMCVSEVSSTL 518


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