BLASTX nr result

ID: Panax21_contig00026229 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00026229
         (624 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002301130.1| predicted protein [Populus trichocarpa] gi|2...   127   2e-27
ref|XP_004148400.1| PREDICTED: inactive poly [ADP-ribose] polyme...   122   4e-26
emb|CAN78474.1| hypothetical protein VITISV_026794 [Vitis vinifera]   120   2e-25
gb|ABR18074.1| unknown [Picea sitchensis]                              95   9e-18
ref|XP_002303439.1| predicted protein [Populus trichocarpa] gi|2...    89   6e-16

>ref|XP_002301130.1| predicted protein [Populus trichocarpa] gi|222842856|gb|EEE80403.1|
           predicted protein [Populus trichocarpa]
          Length = 464

 Score =  127 bits (319), Expect = 2e-27
 Identities = 72/170 (42%), Positives = 101/170 (59%), Gaps = 2/170 (1%)
 Frame = -1

Query: 507 LANSGEKLTCGGA-DCCYVQSLIENHSNFKRSAAPVRVMYFK-DGSWVDFEKEVVDLIRA 334
           L +   K+ C  A +CC    ++ N +NF +SAAP R +YF  DG W+DFE EV++ ++ 
Sbjct: 13  LPSPNPKICCNRATNCCSAPLILANLANFTKSAAPARFIYFNHDGLWIDFENEVLESLKP 72

Query: 333 GFVEGRSVVEVGIGGFEYLFDFYRMLLIDFEYGNQRSVAWIDVSGKCFFPSRFIGGEFAG 154
            F++G++V+E+      YLFDF RML IDF+ G QRS+AWIDV+GKCFFP  F+  +F  
Sbjct: 73  AFLDGKAVIEMSFRESRYLFDFTRMLQIDFDSGIQRSIAWIDVNGKCFFPKMFVREDFG- 131

Query: 153 LTGNSKIRGVEVQNFEEISVSPFPKIEIEIRVRKICDSNKRKRENLDECE 4
                        N EE  +S   KIEIE+ +    +S KRKRE   + E
Sbjct: 132 ------------DNLEEERLSN-RKIEIEVNIDG--NSIKRKREEFRDKE 166


>ref|XP_004148400.1| PREDICTED: inactive poly [ADP-ribose] polymerase RCD1-like [Cucumis
           sativus] gi|449522847|ref|XP_004168437.1| PREDICTED:
           inactive poly [ADP-ribose] polymerase RCD1-like [Cucumis
           sativus]
          Length = 465

 Score =  122 bits (307), Expect = 4e-26
 Identities = 70/149 (46%), Positives = 88/149 (59%)
 Frame = -1

Query: 450 SLIENHSNFKRSAAPVRVMYFKDGSWVDFEKEVVDLIRAGFVEGRSVVEVGIGGFEYLFD 271
           SL+ N+SNFKRS  P R M++   SWVDF  +V++++R  F +    VE+ I G +YLFD
Sbjct: 39  SLLHNYSNFKRSGLPSRFMFYFHSSWVDFPTQVLEILRTAFSDRNPAVELQIDGSKYLFD 98

Query: 270 FYRMLLIDFEYGNQRSVAWIDVSGKCFFPSRFIGGEFAGLTGNSKIRGVEVQNFEEISVS 91
            YRML ID + G QRSVAWID  G+CFFP  FIG E    T NS              +S
Sbjct: 99  LYRMLQIDLDTGRQRSVAWIDDKGECFFPKVFIGEE----TTNSS------------PIS 142

Query: 90  PFPKIEIEIRVRKICDSNKRKRENLDECE 4
             PKIEI I +     S KRKRE ++E E
Sbjct: 143 CSPKIEISITIDG--KSGKRKRETMEENE 169


>emb|CAN78474.1| hypothetical protein VITISV_026794 [Vitis vinifera]
          Length = 496

 Score =  120 bits (301), Expect = 2e-25
 Identities = 57/117 (48%), Positives = 76/117 (64%), Gaps = 4/117 (3%)
 Frame = -1

Query: 468 DCCYVQSLIENHSNFKRSAAPVRVMYFKDGSWVDFEKEVVDLIRAGFVEGRSVVEVGIGG 289
           DCC     ++N +NF+RS  P R M+++DGSWVDF  +V++ +R GF+E ++ ++V I G
Sbjct: 37  DCCSSHLEVQNQANFERSGVPSRFMFYRDGSWVDFPSQVLENVRPGFLERKTTMDVSIDG 96

Query: 288 FEYLFDFYRMLLIDFEYGNQRSVAWIDVSGKCFFPSRFIGGEFA----GLTGNSKIR 130
            EY FDF RML ID   G  RS+AWID +GKCFFP  F+  E A     L   SKIR
Sbjct: 97  SEYRFDFLRMLQIDILTGKGRSIAWIDANGKCFFPKLFVSEEAADGSENLNTKSKIR 153


>gb|ABR18074.1| unknown [Picea sitchensis]
          Length = 338

 Score = 95.1 bits (235), Expect = 9e-18
 Identities = 41/95 (43%), Positives = 58/95 (61%), Gaps = 1/95 (1%)
 Frame = -1

Query: 465 CCYVQSLIENHSNFKRSAAPVRVMYFKDGSWVDFEKEVVDLIRAGFVEGRSVVEVGI-GG 289
           CC    ++EN++NF++S  P R MY   G W+DF  E V +++ GF  G++ +E+ + G 
Sbjct: 26  CCSGMVVVENYNNFRKSGIPARFMYLCKGEWIDFPSETVCILKQGFQSGKTAIEIAMRGS 85

Query: 288 FEYLFDFYRMLLIDFEYGNQRSVAWIDVSGKCFFP 184
             YL DF RM  ID   G    +AWID+ GKCFFP
Sbjct: 86  SSYLVDFLRMSRIDLSDGFHTWIAWIDIQGKCFFP 120


>ref|XP_002303439.1| predicted protein [Populus trichocarpa] gi|222840871|gb|EEE78418.1|
           predicted protein [Populus trichocarpa]
          Length = 615

 Score = 89.0 bits (219), Expect = 6e-16
 Identities = 40/93 (43%), Positives = 61/93 (65%)
 Frame = -1

Query: 453 QSLIENHSNFKRSAAPVRVMYFKDGSWVDFEKEVVDLIRAGFVEGRSVVEVGIGGFEYLF 274
           +SL+ ++SNF R+  P R+M ++ G W+DF K++V LIR  F   ++ VEV + G  Y+ 
Sbjct: 63  RSLLRSYSNFMRTGMPQRLMCYQKGEWIDFPKDLVALIRKDFQGKKAFVEVELEGRCYVI 122

Query: 273 DFYRMLLIDFEYGNQRSVAWIDVSGKCFFPSRF 175
           DF  ML +D + G Q+ +AWID +G CFFP  +
Sbjct: 123 DFLHMLRLDMKTGIQQPIAWIDEAGSCFFPESY 155


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