BLASTX nr result

ID: Panax21_contig00026219 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00026219
         (691 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN74740.1| hypothetical protein VITISV_040899 [Vitis vinifera]   119   6e-25
emb|CBI32919.3| unnamed protein product [Vitis vinifera]               94   2e-17
ref|XP_002316907.1| predicted protein [Populus trichocarpa] gi|2...    81   2e-13
ref|NP_197665.2| FBD-associated F-box protein [Arabidopsis thali...    74   3e-11
dbj|BAB11679.1| unnamed protein product [Arabidopsis thaliana]         74   3e-11

>emb|CAN74740.1| hypothetical protein VITISV_040899 [Vitis vinifera]
          Length = 607

 Score =  119 bits (298), Expect = 6e-25
 Identities = 72/173 (41%), Positives = 99/173 (57%), Gaps = 1/173 (0%)
 Frame = -1

Query: 685 EYSNDGAQEYANRVSWLLQRISAVKSLSLGIDAMIALHFADNDH-LPAFHNLTRLEVKIV 509
           E  ++G   Y   +  LL RIS VK LSL    + +L     D+ LP FHN+TRLE   +
Sbjct: 283 ESPHNGGISYHGPIYELLGRISNVKCLSLTGVTLDSLSGTIGDYKLPTFHNMTRLEFLFI 342

Query: 508 DYYGWKMLPDLLGSSPNLEYFIMKQEHEDEELDNMLWSEPTSVPACLLQHLELIEIIGFQ 329
             + W  LP+ L SSPNLE  +++  + +E +    W  P  VPACL+ HL+ IEI    
Sbjct: 343 GGFNWDFLPNFLHSSPNLEALVIETGYTNELIPEG-WLMPLQVPACLVLHLKEIEIRRIV 401

Query: 328 GNIRELELVKYLLGNSEVLKTLTIKSPRLALDKERMFCTQVMKFPRGSRSCLV 170
           G   ELE V+YLL N+EVL+ +TI      +D+E   C +++  PRGSRSC V
Sbjct: 402 GEDYELEAVEYLLKNAEVLQQMTIDCHESYMDQEFCVCKKLLGLPRGSRSCFV 454


>emb|CBI32919.3| unnamed protein product [Vitis vinifera]
          Length = 411

 Score = 94.4 bits (233), Expect = 2e-17
 Identities = 62/164 (37%), Positives = 94/164 (57%), Gaps = 3/164 (1%)
 Frame = -1

Query: 658 YANRVSWLLQRISAVKSLSLGIDAMIALH--FADNDHLPAFHNLTRLEVKIVDYYGWKML 485
           Y  R+  LL+ IS VK LSL  + + +L   F   + LPAFH++TRLE+++   YG + L
Sbjct: 236 YRGRIYELLRGISNVKHLSLSGETLHSLSGMFCGYE-LPAFHSVTRLELEVDYGYGLEFL 294

Query: 484 PDLLGSSPNLEYFIMKQEHEDE-ELDNMLWSEPTSVPACLLQHLELIEIIGFQGNIRELE 308
            + L +SPNLE  I++  ++DE E++   W+ P  VP C+  HL  +EI  F G   EL 
Sbjct: 295 KEFLDTSPNLEILILENVNKDECEIEE--WTLPLQVPTCVELHLNEVEIKKFDGLDYELG 352

Query: 307 LVKYLLGNSEVLKTLTIKSPRLALDKERMFCTQVMKFPRGSRSC 176
            +++LL N+ VLK ++I        +E   C ++  F R S SC
Sbjct: 353 AIEFLLKNARVLKKMSIDCRDWRDGQEFCVCKKLSGFTRASMSC 396


>ref|XP_002316907.1| predicted protein [Populus trichocarpa] gi|222859972|gb|EEE97519.1|
           predicted protein [Populus trichocarpa]
          Length = 462

 Score = 81.3 bits (199), Expect = 2e-13
 Identities = 45/132 (34%), Positives = 75/132 (56%), Gaps = 1/132 (0%)
 Frame = -1

Query: 556 HLPAFHNLTRLEVKIVDYYGWKMLPDLLGSSPNLEYFIMKQEHEDEELDNMLWSEPTSVP 377
           +LP F NLTRLE++      W +L ++L  SP LE FI+   ++D       W  P  VP
Sbjct: 332 NLPDFQNLTRLEIEASGNDRWLVLHEILKCSPKLEVFIL---YKDSTEKTPRWRNPEFVP 388

Query: 376 ACLLQHLELIEIIGFQGNIRELELVKYLLGNSEVLKTLTIK-SPRLALDKERMFCTQVMK 200
            CL   L++IE +GF+  + E+E+ +YL+ N+ VL+ +TI+   ++  D +     ++ +
Sbjct: 389 RCLRSSLKVIEYVGFESELGEIEMAEYLIKNALVLEKMTIEYGWKMIHDFKERVAERLTE 448

Query: 199 FPRGSRSCLVEF 164
             RGS +C + F
Sbjct: 449 CRRGSTACRIVF 460


>ref|NP_197665.2| FBD-associated F-box protein [Arabidopsis thaliana]
           gi|257096634|sp|Q9FNI8.2|FBD32_ARATH RecName:
           Full=FBD-associated F-box protein At5g22730
           gi|332005685|gb|AED93068.1| FBD-associated F-box protein
           [Arabidopsis thaliana]
          Length = 466

 Score = 73.9 bits (180), Expect = 3e-11
 Identities = 54/163 (33%), Positives = 86/163 (52%), Gaps = 2/163 (1%)
 Frame = -1

Query: 652 NRVSWLLQRISAVKSLSLGIDAMIALHF-ADNDHLPAFHNLTRLEVKIVDYYGWKMLPDL 476
           N V   L  IS V  + +    +  L++  D D LP F NL+RL+ +I  Y+  ++LP +
Sbjct: 305 NMVRNFLTSISGVSDMKISQHFVEFLYYYKDFDPLPQFCNLSRLKAEISLYF-LEILPTI 363

Query: 475 LGSSPNLEYFIMKQE-HEDEELDNMLWSEPTSVPACLLQHLELIEIIGFQGNIRELELVK 299
           L S PNL+  +M  E +  EE + +++S   SVP CL+  LE +EI  F G   ++E+ +
Sbjct: 364 LESCPNLKSLVMVLEFYLQEEDEPIIFS---SVPRCLVSSLESVEIKKFNGRPAKMEVAR 420

Query: 298 YLLGNSEVLKTLTIKSPRLALDKERMFCTQVMKFPRGSRSCLV 170
           Y L NS VL+ L +       +        ++  PRGS +C +
Sbjct: 421 YFLENSGVLQKLVLHLRCSTHEDGFYILKDLLALPRGSSTCRI 463


>dbj|BAB11679.1| unnamed protein product [Arabidopsis thaliana]
          Length = 457

 Score = 73.9 bits (180), Expect = 3e-11
 Identities = 54/163 (33%), Positives = 86/163 (52%), Gaps = 2/163 (1%)
 Frame = -1

Query: 652 NRVSWLLQRISAVKSLSLGIDAMIALHF-ADNDHLPAFHNLTRLEVKIVDYYGWKMLPDL 476
           N V   L  IS V  + +    +  L++  D D LP F NL+RL+ +I  Y+  ++LP +
Sbjct: 296 NMVRNFLTSISGVSDMKISQHFVEFLYYYKDFDPLPQFCNLSRLKAEISLYF-LEILPTI 354

Query: 475 LGSSPNLEYFIMKQE-HEDEELDNMLWSEPTSVPACLLQHLELIEIIGFQGNIRELELVK 299
           L S PNL+  +M  E +  EE + +++S   SVP CL+  LE +EI  F G   ++E+ +
Sbjct: 355 LESCPNLKSLVMVLEFYLQEEDEPIIFS---SVPRCLVSSLESVEIKKFNGRPAKMEVAR 411

Query: 298 YLLGNSEVLKTLTIKSPRLALDKERMFCTQVMKFPRGSRSCLV 170
           Y L NS VL+ L +       +        ++  PRGS +C +
Sbjct: 412 YFLENSGVLQKLVLHLRCSTHEDGFYILKDLLALPRGSSTCRI 454


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