BLASTX nr result

ID: Panax21_contig00026214 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00026214
         (438 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFA36569.1| putative chlorophyll a/b-binding protein, partial...   107   1e-29
ref|NP_001062801.1| Os09g0296800 [Oryza sativa Japonica Group] g...   107   6e-29
gb|EAZ08502.1| hypothetical protein OsI_30775 [Oryza sativa Indi...   107   6e-29
ref|XP_002459987.1| hypothetical protein SORBIDRAFT_02g020290 [S...   107   6e-29
gb|EAZ44119.1| hypothetical protein OsJ_28744 [Oryza sativa Japo...   107   6e-29

>gb|AFA36569.1| putative chlorophyll a/b-binding protein, partial [Lolium perenne]
          Length = 206

 Score =  107 bits (268), Expect(2) = 1e-29
 Identities = 49/53 (92%), Positives = 52/53 (98%)
 Frame = -3

Query: 436 YLPGDINYPGGALFDPLGLSKDPIAFEELKVKEIKNGRLAMVAWLGFYAQAAL 278
           YLPGD+NYPGGALFDPLGLSKDP+AFEELKVKEIKNGRLAMVAWLGFY QAA+
Sbjct: 128 YLPGDLNYPGGALFDPLGLSKDPVAFEELKVKEIKNGRLAMVAWLGFYVQAAV 180



 Score = 47.4 bits (111), Expect(2) = 1e-29
 Identities = 18/25 (72%), Positives = 24/25 (96%)
 Frame = -1

Query: 183 GKGPVQNLLEHIADPIHNNLLSNLL 109
           GKGPVQNL+EH++DP+HNN+LS+ L
Sbjct: 182 GKGPVQNLIEHLSDPLHNNILSSFL 206


>ref|NP_001062801.1| Os09g0296800 [Oryza sativa Japonica Group]
           gi|50725078|dbj|BAD33211.1| putative chlorophyll
           a/b-binding protein [Oryza sativa Japonica Group]
           gi|113631034|dbj|BAF24715.1| Os09g0296800 [Oryza sativa
           Japonica Group]
          Length = 321

 Score =  107 bits (266), Expect(2) = 6e-29
 Identities = 49/53 (92%), Positives = 52/53 (98%)
 Frame = -3

Query: 436 YLPGDINYPGGALFDPLGLSKDPIAFEELKVKEIKNGRLAMVAWLGFYAQAAL 278
           YLPGDINYPGGALFDPLGLSKDP+AFE+LKVKEIKNGRLAMVAWLGFY QAA+
Sbjct: 243 YLPGDINYPGGALFDPLGLSKDPVAFEDLKVKEIKNGRLAMVAWLGFYIQAAV 295



 Score = 45.4 bits (106), Expect(2) = 6e-29
 Identities = 16/25 (64%), Positives = 24/25 (96%)
 Frame = -1

Query: 183 GKGPVQNLLEHIADPIHNNLLSNLL 109
           GKGP+QNL+EH++DP+HNN+LS+ +
Sbjct: 297 GKGPIQNLVEHLSDPLHNNILSSFV 321


>gb|EAZ08502.1| hypothetical protein OsI_30775 [Oryza sativa Indica Group]
          Length = 321

 Score =  107 bits (266), Expect(2) = 6e-29
 Identities = 49/53 (92%), Positives = 52/53 (98%)
 Frame = -3

Query: 436 YLPGDINYPGGALFDPLGLSKDPIAFEELKVKEIKNGRLAMVAWLGFYAQAAL 278
           YLPGDINYPGGALFDPLGLSKDP+AFE+LKVKEIKNGRLAMVAWLGFY QAA+
Sbjct: 243 YLPGDINYPGGALFDPLGLSKDPVAFEDLKVKEIKNGRLAMVAWLGFYIQAAV 295



 Score = 45.4 bits (106), Expect(2) = 6e-29
 Identities = 16/25 (64%), Positives = 24/25 (96%)
 Frame = -1

Query: 183 GKGPVQNLLEHIADPIHNNLLSNLL 109
           GKGP+QNL+EH++DP+HNN+LS+ +
Sbjct: 297 GKGPIQNLVEHLSDPLHNNILSSFV 321


>ref|XP_002459987.1| hypothetical protein SORBIDRAFT_02g020290 [Sorghum bicolor]
           gi|241923364|gb|EER96508.1| hypothetical protein
           SORBIDRAFT_02g020290 [Sorghum bicolor]
          Length = 314

 Score =  107 bits (266), Expect(2) = 6e-29
 Identities = 49/53 (92%), Positives = 52/53 (98%)
 Frame = -3

Query: 436 YLPGDINYPGGALFDPLGLSKDPIAFEELKVKEIKNGRLAMVAWLGFYAQAAL 278
           YLPGDINYPGGALFDPLGLSKDP+AFE+LKVKEIKNGRLAMVAWLGFY QAA+
Sbjct: 236 YLPGDINYPGGALFDPLGLSKDPVAFEDLKVKEIKNGRLAMVAWLGFYIQAAV 288



 Score = 45.4 bits (106), Expect(2) = 6e-29
 Identities = 17/23 (73%), Positives = 23/23 (100%)
 Frame = -1

Query: 183 GKGPVQNLLEHIADPIHNNLLSN 115
           GKGPVQNL+EH++DP+HNN+LS+
Sbjct: 290 GKGPVQNLVEHLSDPLHNNILSS 312


>gb|EAZ44119.1| hypothetical protein OsJ_28744 [Oryza sativa Japonica Group]
          Length = 245

 Score =  107 bits (266), Expect(2) = 6e-29
 Identities = 49/53 (92%), Positives = 52/53 (98%)
 Frame = -3

Query: 436 YLPGDINYPGGALFDPLGLSKDPIAFEELKVKEIKNGRLAMVAWLGFYAQAAL 278
           YLPGDINYPGGALFDPLGLSKDP+AFE+LKVKEIKNGRLAMVAWLGFY QAA+
Sbjct: 167 YLPGDINYPGGALFDPLGLSKDPVAFEDLKVKEIKNGRLAMVAWLGFYIQAAV 219



 Score = 45.4 bits (106), Expect(2) = 6e-29
 Identities = 16/25 (64%), Positives = 24/25 (96%)
 Frame = -1

Query: 183 GKGPVQNLLEHIADPIHNNLLSNLL 109
           GKGP+QNL+EH++DP+HNN+LS+ +
Sbjct: 221 GKGPIQNLVEHLSDPLHNNILSSFV 245


Top