BLASTX nr result

ID: Panax21_contig00026186 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00026186
         (416 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278452.1| PREDICTED: E3 ubiquitin-protein ligase UPL3-...   169   2e-40
ref|XP_002278408.1| PREDICTED: E3 ubiquitin-protein ligase UPL3-...   169   2e-40
ref|XP_002530820.1| hect ubiquitin-protein ligase, putative [Ric...   164   5e-39
ref|XP_004147040.1| PREDICTED: E3 ubiquitin-protein ligase UPL3-...   157   8e-37
ref|XP_003526955.1| PREDICTED: E3 ubiquitin-protein ligase UPL3-...   153   2e-35

>ref|XP_002278452.1| PREDICTED: E3 ubiquitin-protein ligase UPL3-like isoform 2 [Vitis
            vinifera]
          Length = 1814

 Score =  169 bits (428), Expect = 2e-40
 Identities = 89/139 (64%), Positives = 103/139 (74%), Gaps = 1/139 (0%)
 Frame = -2

Query: 415  RRYRKRVGNSNSDVNSAEDSKNSLP-TVGSPPNPVEIPTVNSSLRLAVSSRAKAFKDKYF 239
            RRYRKR GN N D NS E+ K S+  T+GSPP+ VEIPT NS+LR  VS+ AKAFKDKYF
Sbjct: 618  RRYRKRGGNPNPDANSLEEPKTSVSVTIGSPPSSVEIPTSNSNLRTTVSACAKAFKDKYF 677

Query: 238  PSDPGAVEAGVTDDXXXXXXXXXXLNAGTDDQRPKSKGKSKASGTRLADISASREENLVG 59
            PSDPG  EAGVTDD          L++G DD + K+KGKSKASG RL D S ++EENL  
Sbjct: 678  PSDPGCAEAGVTDDLLHLKNLCMRLSSGIDDHKTKAKGKSKASGHRLIDTSTNKEENLTA 737

Query: 58   VMSEILIELSKGDGVSTFE 2
            V+SE+L ELSKGDGVSTFE
Sbjct: 738  VLSEMLAELSKGDGVSTFE 756


>ref|XP_002278408.1| PREDICTED: E3 ubiquitin-protein ligase UPL3-like isoform 1 [Vitis
            vinifera]
          Length = 1896

 Score =  169 bits (428), Expect = 2e-40
 Identities = 89/139 (64%), Positives = 103/139 (74%), Gaps = 1/139 (0%)
 Frame = -2

Query: 415  RRYRKRVGNSNSDVNSAEDSKNSLP-TVGSPPNPVEIPTVNSSLRLAVSSRAKAFKDKYF 239
            RRYRKR GN N D NS E+ K S+  T+GSPP+ VEIPT NS+LR  VS+ AKAFKDKYF
Sbjct: 679  RRYRKRGGNPNPDANSLEEPKTSVSVTIGSPPSSVEIPTSNSNLRTTVSACAKAFKDKYF 738

Query: 238  PSDPGAVEAGVTDDXXXXXXXXXXLNAGTDDQRPKSKGKSKASGTRLADISASREENLVG 59
            PSDPG  EAGVTDD          L++G DD + K+KGKSKASG RL D S ++EENL  
Sbjct: 739  PSDPGCAEAGVTDDLLHLKNLCMRLSSGIDDHKTKAKGKSKASGHRLIDTSTNKEENLTA 798

Query: 58   VMSEILIELSKGDGVSTFE 2
            V+SE+L ELSKGDGVSTFE
Sbjct: 799  VLSEMLAELSKGDGVSTFE 817


>ref|XP_002530820.1| hect ubiquitin-protein ligase, putative [Ricinus communis]
            gi|223529612|gb|EEF31560.1| hect ubiquitin-protein
            ligase, putative [Ricinus communis]
          Length = 1899

 Score =  164 bits (416), Expect = 5e-39
 Identities = 86/139 (61%), Positives = 108/139 (77%), Gaps = 1/139 (0%)
 Frame = -2

Query: 415  RRYRKRVGNSNSDVNSAEDSKNSLPT-VGSPPNPVEIPTVNSSLRLAVSSRAKAFKDKYF 239
            RRY++R GNSN++ +  E+S++ +PT VGSPP+ VEIPTVNSSLR+AVS+ AK+FKDKYF
Sbjct: 685  RRYKRRSGNSNAEGSLLEESRSPIPTNVGSPPSSVEIPTVNSSLRMAVSTCAKSFKDKYF 744

Query: 238  PSDPGAVEAGVTDDXXXXXXXXXXLNAGTDDQRPKSKGKSKASGTRLADISASREENLVG 59
            PSDPGA E GVTDD          LN G DDQ+ K+KGKSKAS +R  D S ++EE L+G
Sbjct: 745  PSDPGASEVGVTDDLLHLKNLCMKLNVGVDDQKTKAKGKSKASESRGIDGSINKEEYLIG 804

Query: 58   VMSEILIELSKGDGVSTFE 2
            V+S++L EL KGDGVSTFE
Sbjct: 805  VISDMLAELRKGDGVSTFE 823


>ref|XP_004147040.1| PREDICTED: E3 ubiquitin-protein ligase UPL3-like [Cucumis sativus]
            gi|449489652|ref|XP_004158376.1| PREDICTED: E3
            ubiquitin-protein ligase UPL3-like [Cucumis sativus]
          Length = 1892

 Score =  157 bits (397), Expect = 8e-37
 Identities = 82/138 (59%), Positives = 100/138 (72%)
 Frame = -2

Query: 415  RRYRKRVGNSNSDVNSAEDSKNSLPTVGSPPNPVEIPTVNSSLRLAVSSRAKAFKDKYFP 236
            RRYR+R GN NSD +S +++KNS+   G P   VE+P++NS+LR +VSS A AFK KYFP
Sbjct: 673  RRYRRRSGNMNSDGSSLDENKNSVSGSGVPQGSVEVPSINSNLRSSVSSCANAFKTKYFP 732

Query: 235  SDPGAVEAGVTDDXXXXXXXXXXLNAGTDDQRPKSKGKSKASGTRLADISASREENLVGV 56
             DPG VE GVTDD          LNAG DDQ+ KSKGK KASG+RL DI  ++EE L GV
Sbjct: 733  LDPGDVEVGVTDDLLRLKNLCFKLNAGIDDQKSKSKGKLKASGSRLDDIITNKEEYLTGV 792

Query: 55   MSEILIELSKGDGVSTFE 2
            +SE+L+EL K DGVSTFE
Sbjct: 793  ISEMLVELGKDDGVSTFE 810


>ref|XP_003526955.1| PREDICTED: E3 ubiquitin-protein ligase UPL3-like [Glycine max]
          Length = 1895

 Score =  153 bits (386), Expect = 2e-35
 Identities = 81/139 (58%), Positives = 98/139 (70%), Gaps = 1/139 (0%)
 Frame = -2

Query: 415  RRYRKRVGNSNSDVNSAEDSKNSLPT-VGSPPNPVEIPTVNSSLRLAVSSRAKAFKDKYF 239
            RRYR R GNSN D N ++D K+ +P  VG PP+ VE PT NSS+R ++SS A AFKDKYF
Sbjct: 675  RRYRLRSGNSNPDANRSDDLKSPVPVNVGLPPSSVETPTTNSSIRASISSVANAFKDKYF 734

Query: 238  PSDPGAVEAGVTDDXXXXXXXXXXLNAGTDDQRPKSKGKSKASGTRLADISASREENLVG 59
            PSDPG+VE GV+DD          LN G DDQR K+KGK +ASG  L D S + EE L+G
Sbjct: 735  PSDPGSVEVGVSDDLLHLKNLCSKLNTGVDDQRSKAKGKVEASGFDLDDDSTNTEEYLIG 794

Query: 58   VMSEILIELSKGDGVSTFE 2
            V+S++L EL KGD VSTFE
Sbjct: 795  VISDMLKELGKGDSVSTFE 813


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