BLASTX nr result

ID: Panax21_contig00026148 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00026148
         (500 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513187.1| DNA binding protein, putative [Ricinus commu...    58   3e-13
ref|XP_002298446.1| predicted protein [Populus trichocarpa] gi|2...    56   8e-13
ref|XP_002314023.1| predicted protein [Populus trichocarpa] gi|2...    61   1e-12
ref|XP_003546874.1| PREDICTED: transcription factor bHLH128-like...    50   1e-09
ref|XP_003531430.1| PREDICTED: transcription factor bHLH130-like...    47   2e-08

>ref|XP_002513187.1| DNA binding protein, putative [Ricinus communis]
           gi|223547685|gb|EEF49178.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 432

 Score = 57.8 bits (138), Expect(2) = 3e-13
 Identities = 29/74 (39%), Positives = 49/74 (66%)
 Frame = -2

Query: 226 GQNGEQSSGRYLPNSPNDSTSNNLKRNRDSEVKMFSNLNGFDSQNGDSKHYSSGLVHQLS 47
           G  G++    +  +S +DS+SN+ KR RD++  ++S+LN  ++Q+G+S +  + L H LS
Sbjct: 266 GSIGKRQYMNFANDSWDDSSSNDFKRLRDNDGSVYSSLNILENQSGNSGNRITSLTHHLS 325

Query: 46  SPSTSVEMATLENF 5
            P T+ EMAT+E F
Sbjct: 326 LPKTAGEMATVEKF 339



 Score = 41.6 bits (96), Expect(2) = 3e-13
 Identities = 20/52 (38%), Positives = 30/52 (57%)
 Frame = -1

Query: 497 DVGNFRASNRTNIEASSKTIRLSSYMTFSSGPSSCSPITENGNDNVGTRSQQ 342
           +VG F+ SN  N E++  T RL +++ FSSG      I E G++N G  S +
Sbjct: 214 EVGGFQVSNGLNGESNPSTSRLGNHLNFSSGQRLLPQIAETGDENPGASSPE 265


>ref|XP_002298446.1| predicted protein [Populus trichocarpa] gi|222845704|gb|EEE83251.1|
           predicted protein [Populus trichocarpa]
          Length = 413

 Score = 55.8 bits (133), Expect(2) = 8e-13
 Identities = 32/76 (42%), Positives = 43/76 (56%)
 Frame = -2

Query: 232 GSGQNGEQSSGRYLPNSPNDSTSNNLKRNRDSEVKMFSNLNGFDSQNGDSKHYSSGLVHQ 53
           GS   G+ S  +Y+ N  N  T  +  R +D++  MFS LN  +SQ G+S +  +GL H 
Sbjct: 250 GSSPEGDFSKRKYMYNF-NSDTWGDASRLKDNDGNMFSGLNRRESQVGNSGNRMTGLTHH 308

Query: 52  LSSPSTSVEMATLENF 5
           LS P T  EMAT E F
Sbjct: 309 LSLPKTVAEMATAEKF 324



 Score = 42.4 bits (98), Expect(2) = 8e-13
 Identities = 22/52 (42%), Positives = 31/52 (59%)
 Frame = -1

Query: 497 DVGNFRASNRTNIEASSKTIRLSSYMTFSSGPSSCSPITENGNDNVGTRSQQ 342
           + G+FRA N TN EA+  T RL S++ FSSG  +   I E G + +G  S +
Sbjct: 203 NAGSFRAGNGTNGEATPSTSRLRSHVNFSSGHRTLPQIAEIGEECIGGSSPE 254


>ref|XP_002314023.1| predicted protein [Populus trichocarpa] gi|222850431|gb|EEE87978.1|
           predicted protein [Populus trichocarpa]
          Length = 421

 Score = 60.8 bits (146), Expect(2) = 1e-12
 Identities = 33/80 (41%), Positives = 46/80 (57%), Gaps = 4/80 (5%)
 Frame = -2

Query: 232 GSGQNGEQSSGRYLPNSPNDS----TSNNLKRNRDSEVKMFSNLNGFDSQNGDSKHYSSG 65
           G    G+ S  RY+    +DS    + + LKR RD++  MFS LN  D+Q+G+S +  +G
Sbjct: 246 GRSPEGDVSEARYMSRFTSDSWDGASLSGLKRQRDNDGNMFSGLNTLDNQDGNSGNRVTG 305

Query: 64  LVHQLSSPSTSVEMATLENF 5
           L H LS P T  E AT+E F
Sbjct: 306 LTHHLSLPKTLSETATIEKF 325



 Score = 37.0 bits (84), Expect(2) = 1e-12
 Identities = 22/50 (44%), Positives = 29/50 (58%)
 Frame = -1

Query: 491 GNFRASNRTNIEASSKTIRLSSYMTFSSGPSSCSPITENGNDNVGTRSQQ 342
           G+FRA N TN EA S T +L  ++ FSSG      I E G + +G RS +
Sbjct: 202 GSFRAGNGTNGEA-SPTNKLRRHVNFSSGQRMLPQIAEIGEECIGGRSPE 250


>ref|XP_003546874.1| PREDICTED: transcription factor bHLH128-like [Glycine max]
          Length = 445

 Score = 50.4 bits (119), Expect(2) = 1e-09
 Identities = 27/75 (36%), Positives = 43/75 (57%), Gaps = 3/75 (4%)
 Frame = -2

Query: 220 NGEQSSGRYLPNSPND---STSNNLKRNRDSEVKMFSNLNGFDSQNGDSKHYSSGLVHQL 50
           N   SS  Y+P+  N+   S++ N  +  + +  MFS  NG +SQ  D  + + GL H L
Sbjct: 276 NDNGSSKCYIPSFTNEFWESSAFNAPKTENEDEIMFSTSNGLESQETDFSYQNHGLTHHL 335

Query: 49  SSPSTSVEMATLENF 5
           S PS+S +M+++E F
Sbjct: 336 SLPSSSTKMSSIEMF 350



 Score = 37.0 bits (84), Expect(2) = 1e-09
 Identities = 21/58 (36%), Positives = 35/58 (60%), Gaps = 5/58 (8%)
 Frame = -1

Query: 497 DVGNFRASNRTNIEASSKTIRLSSYMTFSSGPSSC-----SPITENGNDNVGTRSQQN 339
           +VG+F+ ++ +N +A++ T  L S +TFSS  SSC       I ENGN+++     Q+
Sbjct: 214 EVGSFKDNDVSNGQATASTSGLHSSLTFSSRSSSCLKQMPPQIAENGNESLEENYDQS 271


>ref|XP_003531430.1| PREDICTED: transcription factor bHLH130-like [Glycine max]
          Length = 450

 Score = 46.6 bits (109), Expect(2) = 2e-08
 Identities = 26/75 (34%), Positives = 41/75 (54%), Gaps = 3/75 (4%)
 Frame = -2

Query: 220 NGEQSSGRYLPNSPND---STSNNLKRNRDSEVKMFSNLNGFDSQNGDSKHYSSGLVHQL 50
           N   SS  Y+P+  N+   S++ N  +  + +  MFS  N  +SQ  D    + GL H L
Sbjct: 281 NDNGSSKCYIPSFTNELWESSAFNAPKTENEDEIMFSTSNILESQEADFSFQNLGLTHHL 340

Query: 49  SSPSTSVEMATLENF 5
           S PS+S +M+++E F
Sbjct: 341 SLPSSSTKMSSIEKF 355



 Score = 37.0 bits (84), Expect(2) = 2e-08
 Identities = 22/57 (38%), Positives = 33/57 (57%), Gaps = 4/57 (7%)
 Frame = -1

Query: 497 DVGNFRASNRTNIEASSKTIRLSSYMTFSSGPSSC----SPITENGNDNVGTRSQQN 339
           +VG+F+A + +N   ++ T  L S  TFSS PSSC      I ENGN+++     Q+
Sbjct: 220 EVGSFKADDVSNGLVTASTGGLHSSHTFSSRPSSCLKRLPQIAENGNESLEENCDQS 276


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