BLASTX nr result

ID: Panax21_contig00026130 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00026130
         (607 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281928.1| PREDICTED: uncharacterized protein LOC100262...   175   5e-42
emb|CAN63286.1| hypothetical protein VITISV_025194 [Vitis vinifera]   175   5e-42
ref|XP_002521884.1| conserved hypothetical protein [Ricinus comm...   161   7e-38
gb|ACU23450.1| unknown [Glycine max]                                  154   9e-36
ref|XP_002315831.1| predicted protein [Populus trichocarpa] gi|2...   151   1e-34

>ref|XP_002281928.1| PREDICTED: uncharacterized protein LOC100262842 [Vitis vinifera]
           gi|296081414|emb|CBI16847.3| unnamed protein product
           [Vitis vinifera]
          Length = 303

 Score =  175 bits (444), Expect = 5e-42
 Identities = 85/105 (80%), Positives = 95/105 (90%)
 Frame = -2

Query: 315 MGSCGRNGAVRQYIRSKVPRLRWTPDLHQCFIHAIQRLGGQDKATPKLVLQLMDVRGLTI 136
           MGSCGRNGAVRQYIRSKVPRLRWTP+LH CF+HAI+RLGGQDKATPKLVLQLMDVRGLTI
Sbjct: 1   MGSCGRNGAVRQYIRSKVPRLRWTPELHHCFVHAIERLGGQDKATPKLVLQLMDVRGLTI 60

Query: 135 SHVKSHLQMYRSMKSDDTREERSFVERSRKHSLEEDHHDGCIDQE 1
           SHVKSHLQMYRSMKSD  R++RS  ++ RK S E+  HDGC+D+E
Sbjct: 61  SHVKSHLQMYRSMKSDIGRQDRSSTQQ-RKQSFED--HDGCVDEE 102


>emb|CAN63286.1| hypothetical protein VITISV_025194 [Vitis vinifera]
          Length = 303

 Score =  175 bits (444), Expect = 5e-42
 Identities = 85/105 (80%), Positives = 95/105 (90%)
 Frame = -2

Query: 315 MGSCGRNGAVRQYIRSKVPRLRWTPDLHQCFIHAIQRLGGQDKATPKLVLQLMDVRGLTI 136
           MGSCGRNGAVRQYIRSKVPRLRWTP+LH CF+HAI+RLGGQDKATPKLVLQLMDVRGLTI
Sbjct: 1   MGSCGRNGAVRQYIRSKVPRLRWTPELHHCFVHAIERLGGQDKATPKLVLQLMDVRGLTI 60

Query: 135 SHVKSHLQMYRSMKSDDTREERSFVERSRKHSLEEDHHDGCIDQE 1
           SHVKSHLQMYRSMKSD  R++RS  ++ RK S E+  HDGC+D+E
Sbjct: 61  SHVKSHLQMYRSMKSDIGRQDRSSTQQ-RKQSFED--HDGCVDEE 102


>ref|XP_002521884.1| conserved hypothetical protein [Ricinus communis]
           gi|223538922|gb|EEF40520.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 298

 Score =  161 bits (408), Expect = 7e-38
 Identities = 75/104 (72%), Positives = 90/104 (86%)
 Frame = -2

Query: 315 MGSCGRNGAVRQYIRSKVPRLRWTPDLHQCFIHAIQRLGGQDKATPKLVLQLMDVRGLTI 136
           MGSCGR+G VRQY+RSKVPRLRWTP+LH CF+HAI+RLGGQDKATPKLVLQLMDV+GLTI
Sbjct: 1   MGSCGRSGTVRQYVRSKVPRLRWTPELHHCFVHAIERLGGQDKATPKLVLQLMDVKGLTI 60

Query: 135 SHVKSHLQMYRSMKSDDTREERSFVERSRKHSLEEDHHDGCIDQ 4
           SHVKSHLQMYRSM+SD  ++++S   + R++    D HD CID+
Sbjct: 61  SHVKSHLQMYRSMRSDLGKQDKSSTHQRRQYF---DEHDECIDE 101


>gb|ACU23450.1| unknown [Glycine max]
          Length = 156

 Score =  154 bits (390), Expect = 9e-36
 Identities = 75/104 (72%), Positives = 86/104 (82%)
 Frame = -2

Query: 315 MGSCGRNGAVRQYIRSKVPRLRWTPDLHQCFIHAIQRLGGQDKATPKLVLQLMDVRGLTI 136
           MGSCGR GAVRQY+RSKVPRLRWTP+LH+CF+HAI  LGG  KATPKLVLQLMDV+GLTI
Sbjct: 1   MGSCGREGAVRQYVRSKVPRLRWTPELHRCFVHAIDSLGGHHKATPKLVLQLMDVKGLTI 60

Query: 135 SHVKSHLQMYRSMKSDDTREERSFVERSRKHSLEEDHHDGCIDQ 4
           SHVKSHLQMYRSM+ D  R+ R+   + R  S EE H DGC+D+
Sbjct: 61  SHVKSHLQMYRSMRGDLGRQGRT-PSQHRNQSFEE-HDDGCVDE 102


>ref|XP_002315831.1| predicted protein [Populus trichocarpa] gi|222864871|gb|EEF02002.1|
           predicted protein [Populus trichocarpa]
          Length = 207

 Score =  151 bits (381), Expect = 1e-34
 Identities = 71/91 (78%), Positives = 83/91 (91%), Gaps = 1/91 (1%)
 Frame = -2

Query: 315 MGSCGRNGAVRQYIRSKVPRLRWTPDLHQCFIHAIQRLGGQDKATPKLVLQLMDVRGLTI 136
           MGSCGR+GAVRQY+RSKVPRLRWTP+LH CF+HAI+RLGGQDKATPKLVLQ+MDV+GLTI
Sbjct: 1   MGSCGRSGAVRQYVRSKVPRLRWTPELHHCFVHAIERLGGQDKATPKLVLQMMDVKGLTI 60

Query: 135 SHVKSHLQMYRSMKSDDT-REERSFVERSRK 46
           SHVKSHLQMYRSM+S D  R +RS  ++ R+
Sbjct: 61  SHVKSHLQMYRSMRSGDLGRLDRSSTQQKRQ 91


Top