BLASTX nr result

ID: Panax21_contig00026127 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00026127
         (363 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510555.1| conserved hypothetical protein [Ricinus comm...    97   1e-18
ref|XP_002279699.1| PREDICTED: uncharacterized protein LOC100247...    88   6e-16
emb|CAN80480.1| hypothetical protein VITISV_023109 [Vitis vinifera]    88   6e-16
ref|XP_002300698.1| predicted protein [Populus trichocarpa] gi|2...    76   3e-12
ref|XP_003589511.1| hypothetical protein MTR_1g025500 [Medicago ...    70   2e-10

>ref|XP_002510555.1| conserved hypothetical protein [Ricinus communis]
            gi|223551256|gb|EEF52742.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 1005

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 51/108 (47%), Positives = 63/108 (58%), Gaps = 29/108 (26%)
 Frame = -2

Query: 320  LVSASSALPPAFSQS------------------GRGNRDT-----------GGLRQLFNS 228
            ++ ++SA+PPAFSQ                    R N D            GGLRQLF  
Sbjct: 898  ILGSASAVPPAFSQPPFIMSMSGAPVSLNGAGPSRHNFDLNSGFAIEGGNPGGLRQLFLP 957

Query: 227  GQGRSIDEHMRGNSQPTSSSGVGGKRKETDGGWEPYPFNYKHHQPPWK 84
            GQ RS++EH+R N+QP+SSSGVGGKR+E D GWEPY   YKH QPPW+
Sbjct: 958  GQSRSMEEHLRANAQPSSSSGVGGKRREPDSGWEPYSLPYKHPQPPWR 1005


>ref|XP_002279699.1| PREDICTED: uncharacterized protein LOC100247144 [Vitis vinifera]
          Length = 1020

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 44/62 (70%), Positives = 47/62 (75%)
 Frame = -2

Query: 269  GNRDTGGLRQLFNSGQGRSIDEHMRGNSQPTSSSGVGGKRKETDGGWEPYPFNYKHHQPP 90
            GNRDTG  RQLF  GQ     E +RGN QP+SSSG+GGKRKE DGGWE YPFNYK  QPP
Sbjct: 964  GNRDTGVSRQLFIPGQS----EQLRGNLQPSSSSGLGGKRKEPDGGWESYPFNYK-LQPP 1018

Query: 89   WK 84
            WK
Sbjct: 1019 WK 1020


>emb|CAN80480.1| hypothetical protein VITISV_023109 [Vitis vinifera]
          Length = 903

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 44/62 (70%), Positives = 47/62 (75%)
 Frame = -2

Query: 269  GNRDTGGLRQLFNSGQGRSIDEHMRGNSQPTSSSGVGGKRKETDGGWEPYPFNYKHHQPP 90
            GNRDTG  RQLF  GQ     E +RGN QP+SSSG+GGKRKE DGGWE YPFNYK  QPP
Sbjct: 847  GNRDTGVSRQLFIPGQS----EQLRGNLQPSSSSGLGGKRKEPDGGWESYPFNYK-LQPP 901

Query: 89   WK 84
            WK
Sbjct: 902  WK 903


>ref|XP_002300698.1| predicted protein [Populus trichocarpa] gi|222842424|gb|EEE79971.1|
            predicted protein [Populus trichocarpa]
          Length = 1011

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 38/59 (64%), Positives = 41/59 (69%), Gaps = 1/59 (1%)
 Frame = -2

Query: 257  TGGLRQLFNSGQGRSIDEHMRGNSQPTSSSGVGGKRKETDGGWEP-YPFNYKHHQPPWK 84
            TGGLRQLF  GQG         +SQP+SSSGVGGKRKE D GWEP Y   YKH QPPW+
Sbjct: 962  TGGLRQLFMPGQG---------SSQPSSSSGVGGKRKEPDSGWEPAYSLQYKHPQPPWR 1011


>ref|XP_003589511.1| hypothetical protein MTR_1g025500 [Medicago truncatula]
            gi|355478559|gb|AES59762.1| hypothetical protein
            MTR_1g025500 [Medicago truncatula]
          Length = 1020

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 37/64 (57%), Positives = 42/64 (65%), Gaps = 2/64 (3%)
 Frame = -2

Query: 269  GNRDTGGLRQLFNSGQGRSIDEHMRGNSQPTSSSGVGGKRKETDG-GWEPYPFNYKH-HQ 96
            GNRD    R  F  GQ R++++      Q +SSSGVGGKRKE DG GWE YPF YKH  Q
Sbjct: 960  GNRDALTARPFFFPGQSRAMEDR---TLQQSSSSGVGGKRKEPDGSGWETYPFGYKHQQQ 1016

Query: 95   PPWK 84
            PPWK
Sbjct: 1017 PPWK 1020


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