BLASTX nr result

ID: Panax21_contig00026112 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00026112
         (361 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632558.1| PREDICTED: probable pre-mRNA-splicing factor...   249   2e-64
ref|XP_002268542.1| PREDICTED: probable pre-mRNA-splicing factor...   249   2e-64
ref|XP_002510773.1| ATP-dependent RNA helicase, putative [Ricinu...   249   2e-64
ref|XP_002331832.1| predicted protein [Populus trichocarpa] gi|2...   248   4e-64
emb|CAN82460.1| hypothetical protein VITISV_005515 [Vitis vinifera]   247   6e-64

>ref|XP_003632558.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
            helicase-like [Vitis vinifera]
          Length = 1172

 Score =  249 bits (636), Expect = 2e-64
 Identities = 119/120 (99%), Positives = 120/120 (100%)
 Frame = -1

Query: 361  KYKLDVVSAGKNFTKIRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPSSALFQRQPD 182
            KYKLDVVSAGKNFTKIRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPSSALFQRQPD
Sbjct: 1042 KYKLDVVSAGKNFTKIRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPSSALFQRQPD 1101

Query: 181  WVIYHELVMTTKEYMREVTVVDPKWLVELAPRFFKVADPTKMSKRKRQERIEPLYDRYHE 2
            WVIYHELVMTTKEYMREVTV+DPKWLVELAPRFFKVADPTKMSKRKRQERIEPLYDRYHE
Sbjct: 1102 WVIYHELVMTTKEYMREVTVIDPKWLVELAPRFFKVADPTKMSKRKRQERIEPLYDRYHE 1161


>ref|XP_002268542.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
            helicase-like isoform 2 [Vitis vinifera]
          Length = 1175

 Score =  249 bits (636), Expect = 2e-64
 Identities = 119/120 (99%), Positives = 120/120 (100%)
 Frame = -1

Query: 361  KYKLDVVSAGKNFTKIRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPSSALFQRQPD 182
            KYKLDVVSAGKNFTKIRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPSSALFQRQPD
Sbjct: 1045 KYKLDVVSAGKNFTKIRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPSSALFQRQPD 1104

Query: 181  WVIYHELVMTTKEYMREVTVVDPKWLVELAPRFFKVADPTKMSKRKRQERIEPLYDRYHE 2
            WVIYHELVMTTKEYMREVTV+DPKWLVELAPRFFKVADPTKMSKRKRQERIEPLYDRYHE
Sbjct: 1105 WVIYHELVMTTKEYMREVTVIDPKWLVELAPRFFKVADPTKMSKRKRQERIEPLYDRYHE 1164


>ref|XP_002510773.1| ATP-dependent RNA helicase, putative [Ricinus communis]
            gi|223551474|gb|EEF52960.1| ATP-dependent RNA helicase,
            putative [Ricinus communis]
          Length = 1177

 Score =  249 bits (636), Expect = 2e-64
 Identities = 119/120 (99%), Positives = 120/120 (100%)
 Frame = -1

Query: 361  KYKLDVVSAGKNFTKIRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPSSALFQRQPD 182
            KYKLDVVSAGKNFTKIRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPSSALFQRQPD
Sbjct: 1047 KYKLDVVSAGKNFTKIRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPSSALFQRQPD 1106

Query: 181  WVIYHELVMTTKEYMREVTVVDPKWLVELAPRFFKVADPTKMSKRKRQERIEPLYDRYHE 2
            WVIYHELVMTTKEYMREVTV+DPKWLVELAPRFFKVADPTKMSKRKRQERIEPLYDRYHE
Sbjct: 1107 WVIYHELVMTTKEYMREVTVIDPKWLVELAPRFFKVADPTKMSKRKRQERIEPLYDRYHE 1166


>ref|XP_002331832.1| predicted protein [Populus trichocarpa] gi|222875070|gb|EEF12201.1|
            predicted protein [Populus trichocarpa]
          Length = 1171

 Score =  248 bits (633), Expect = 4e-64
 Identities = 118/120 (98%), Positives = 120/120 (100%)
 Frame = -1

Query: 361  KYKLDVVSAGKNFTKIRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPSSALFQRQPD 182
            KYKLDVVSAGKNFTKIRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPSSALFQRQPD
Sbjct: 1041 KYKLDVVSAGKNFTKIRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPSSALFQRQPD 1100

Query: 181  WVIYHELVMTTKEYMREVTVVDPKWLVELAPRFFKVADPTKMSKRKRQERIEPLYDRYHE 2
            WVIYHELVMTTKEYMREVTV+DPKWLVELAPRFFKV+DPTKMSKRKRQERIEPLYDRYHE
Sbjct: 1101 WVIYHELVMTTKEYMREVTVIDPKWLVELAPRFFKVSDPTKMSKRKRQERIEPLYDRYHE 1160


>emb|CAN82460.1| hypothetical protein VITISV_005515 [Vitis vinifera]
          Length = 1162

 Score =  247 bits (631), Expect = 6e-64
 Identities = 118/119 (99%), Positives = 119/119 (100%)
 Frame = -1

Query: 358  YKLDVVSAGKNFTKIRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPSSALFQRQPDW 179
            YKLDVVSAGKNFTKIRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPSSALFQRQPDW
Sbjct: 1033 YKLDVVSAGKNFTKIRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPSSALFQRQPDW 1092

Query: 178  VIYHELVMTTKEYMREVTVVDPKWLVELAPRFFKVADPTKMSKRKRQERIEPLYDRYHE 2
            VIYHELVMTTKEYMREVTV+DPKWLVELAPRFFKVADPTKMSKRKRQERIEPLYDRYHE
Sbjct: 1093 VIYHELVMTTKEYMREVTVIDPKWLVELAPRFFKVADPTKMSKRKRQERIEPLYDRYHE 1151


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