BLASTX nr result
ID: Panax21_contig00026112
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00026112 (361 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003632558.1| PREDICTED: probable pre-mRNA-splicing factor... 249 2e-64 ref|XP_002268542.1| PREDICTED: probable pre-mRNA-splicing factor... 249 2e-64 ref|XP_002510773.1| ATP-dependent RNA helicase, putative [Ricinu... 249 2e-64 ref|XP_002331832.1| predicted protein [Populus trichocarpa] gi|2... 248 4e-64 emb|CAN82460.1| hypothetical protein VITISV_005515 [Vitis vinifera] 247 6e-64 >ref|XP_003632558.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA helicase-like [Vitis vinifera] Length = 1172 Score = 249 bits (636), Expect = 2e-64 Identities = 119/120 (99%), Positives = 120/120 (100%) Frame = -1 Query: 361 KYKLDVVSAGKNFTKIRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPSSALFQRQPD 182 KYKLDVVSAGKNFTKIRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPSSALFQRQPD Sbjct: 1042 KYKLDVVSAGKNFTKIRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPSSALFQRQPD 1101 Query: 181 WVIYHELVMTTKEYMREVTVVDPKWLVELAPRFFKVADPTKMSKRKRQERIEPLYDRYHE 2 WVIYHELVMTTKEYMREVTV+DPKWLVELAPRFFKVADPTKMSKRKRQERIEPLYDRYHE Sbjct: 1102 WVIYHELVMTTKEYMREVTVIDPKWLVELAPRFFKVADPTKMSKRKRQERIEPLYDRYHE 1161 >ref|XP_002268542.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA helicase-like isoform 2 [Vitis vinifera] Length = 1175 Score = 249 bits (636), Expect = 2e-64 Identities = 119/120 (99%), Positives = 120/120 (100%) Frame = -1 Query: 361 KYKLDVVSAGKNFTKIRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPSSALFQRQPD 182 KYKLDVVSAGKNFTKIRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPSSALFQRQPD Sbjct: 1045 KYKLDVVSAGKNFTKIRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPSSALFQRQPD 1104 Query: 181 WVIYHELVMTTKEYMREVTVVDPKWLVELAPRFFKVADPTKMSKRKRQERIEPLYDRYHE 2 WVIYHELVMTTKEYMREVTV+DPKWLVELAPRFFKVADPTKMSKRKRQERIEPLYDRYHE Sbjct: 1105 WVIYHELVMTTKEYMREVTVIDPKWLVELAPRFFKVADPTKMSKRKRQERIEPLYDRYHE 1164 >ref|XP_002510773.1| ATP-dependent RNA helicase, putative [Ricinus communis] gi|223551474|gb|EEF52960.1| ATP-dependent RNA helicase, putative [Ricinus communis] Length = 1177 Score = 249 bits (636), Expect = 2e-64 Identities = 119/120 (99%), Positives = 120/120 (100%) Frame = -1 Query: 361 KYKLDVVSAGKNFTKIRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPSSALFQRQPD 182 KYKLDVVSAGKNFTKIRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPSSALFQRQPD Sbjct: 1047 KYKLDVVSAGKNFTKIRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPSSALFQRQPD 1106 Query: 181 WVIYHELVMTTKEYMREVTVVDPKWLVELAPRFFKVADPTKMSKRKRQERIEPLYDRYHE 2 WVIYHELVMTTKEYMREVTV+DPKWLVELAPRFFKVADPTKMSKRKRQERIEPLYDRYHE Sbjct: 1107 WVIYHELVMTTKEYMREVTVIDPKWLVELAPRFFKVADPTKMSKRKRQERIEPLYDRYHE 1166 >ref|XP_002331832.1| predicted protein [Populus trichocarpa] gi|222875070|gb|EEF12201.1| predicted protein [Populus trichocarpa] Length = 1171 Score = 248 bits (633), Expect = 4e-64 Identities = 118/120 (98%), Positives = 120/120 (100%) Frame = -1 Query: 361 KYKLDVVSAGKNFTKIRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPSSALFQRQPD 182 KYKLDVVSAGKNFTKIRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPSSALFQRQPD Sbjct: 1041 KYKLDVVSAGKNFTKIRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPSSALFQRQPD 1100 Query: 181 WVIYHELVMTTKEYMREVTVVDPKWLVELAPRFFKVADPTKMSKRKRQERIEPLYDRYHE 2 WVIYHELVMTTKEYMREVTV+DPKWLVELAPRFFKV+DPTKMSKRKRQERIEPLYDRYHE Sbjct: 1101 WVIYHELVMTTKEYMREVTVIDPKWLVELAPRFFKVSDPTKMSKRKRQERIEPLYDRYHE 1160 >emb|CAN82460.1| hypothetical protein VITISV_005515 [Vitis vinifera] Length = 1162 Score = 247 bits (631), Expect = 6e-64 Identities = 118/119 (99%), Positives = 119/119 (100%) Frame = -1 Query: 358 YKLDVVSAGKNFTKIRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPSSALFQRQPDW 179 YKLDVVSAGKNFTKIRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPSSALFQRQPDW Sbjct: 1033 YKLDVVSAGKNFTKIRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPSSALFQRQPDW 1092 Query: 178 VIYHELVMTTKEYMREVTVVDPKWLVELAPRFFKVADPTKMSKRKRQERIEPLYDRYHE 2 VIYHELVMTTKEYMREVTV+DPKWLVELAPRFFKVADPTKMSKRKRQERIEPLYDRYHE Sbjct: 1093 VIYHELVMTTKEYMREVTVIDPKWLVELAPRFFKVADPTKMSKRKRQERIEPLYDRYHE 1151