BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00026060
         (713 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271968.2| PREDICTED: pentatricopeptide repeat-containi...   353   2e-95
ref|XP_004149535.1| PREDICTED: pentatricopeptide repeat-containi...   334   9e-90
ref|XP_004162581.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   333   3e-89
ref|XP_003538894.1| PREDICTED: pentatricopeptide repeat-containi...   322   6e-86
ref|XP_003612258.1| Pentatricopeptide repeat-containing protein ...   311   6e-83

>ref|XP_002271968.2| PREDICTED: pentatricopeptide repeat-containing protein At4g02750
           [Vitis vinifera]
          Length = 788

 Score =  353 bits (906), Expect = 2e-95
 Identities = 164/236 (69%), Positives = 198/236 (83%)
 Frame = -3

Query: 711 ENGSLVFQQNQKITQLGKSGRIEEAIKIFNQMPVRNTVTYNSMISVYAKNGRIRDAHELF 532
           E+GS VF+ N KITQLGKSG+I+EAIK+F  M  +NTVT+NSMIS +AKNGRI DA +LF
Sbjct: 10  EHGSYVFRHNLKITQLGKSGQIDEAIKVFQHMTHKNTVTHNSMISAFAKNGRISDARQLF 69

Query: 531 DRMPNRNLVSWNTMISGCLHNDNVEKACELFHKMPQRDYFSWTLMITCYTRHGDLEKARK 352
           D MP RN+VSWN+MI+  LHND VE+A +LF KMP RD +SWTLMITCYTR+G+L KAR 
Sbjct: 70  DGMPQRNIVSWNSMIAAYLHNDRVEEARQLFDKMPTRDLYSWTLMITCYTRNGELAKARN 129

Query: 351 LFDLLPDKRNPACWNAMISGYAKSRHLRDARELFDEMSVKNLISWNSMLAGYTQNGEMLL 172
           LF+LLP K NP C NAM++GYAK+R   +AR LFD M  K+L+SWNSML GYT+NGEM L
Sbjct: 130 LFNLLPYKWNPVCCNAMVAGYAKNRQFDEARRLFDAMPAKDLVSWNSMLTGYTRNGEMRL 189

Query: 171 GLKFFEEMVDKDVVSWNLLVDGFVEIGDLASAWQFFQRIPNPNVVSWVTMLCGFVR 4
           GL+FFEEM ++DVVSWNL+VDGFVE+GDL S+W+FF++IPNPN VSWVTMLCGF R
Sbjct: 190 GLQFFEEMAERDVVSWNLMVDGFVEVGDLNSSWEFFEKIPNPNTVSWVTMLCGFAR 245



 Score =  189 bits (479), Expect = 6e-46
 Identities = 85/218 (38%), Positives = 150/218 (68%)
 Frame = -3

Query: 654 GRIEEAIKIFNQMPVRNTVTYNSMISVYAKNGRIRDAHELFDRMPNRNLVSWNTMISGCL 475
           G +  + + F ++P  NTV++ +M+  +A+ G+I +A  LFD+MP RN+V+WN MI+  +
Sbjct: 216 GDLNSSWEFFEKIPNPNTVSWVTMLCGFARFGKIAEARRLFDQMPIRNVVAWNAMIAAYV 275

Query: 474 HNDNVEKACELFHKMPQRDYFSWTLMITCYTRHGDLEKARKLFDLLPDKRNPACWNAMIS 295
            N +V++A  LF +MP+++  SWT +I  Y R G L++AR+L + +P  RN A   AMIS
Sbjct: 276 QNCHVDEAISLFMEMPEKNSISWTTVINGYVRMGKLDEARQLLNQMP-YRNVAAQTAMIS 334

Query: 294 GYAKSRHLRDARELFDEMSVKNLISWNSMLAGYTQNGEMLLGLKFFEEMVDKDVVSWNLL 115
           GY +++ + DAR++F+++S+++++ WN+M+AGY+Q G M   L  F++MV KD+VSWN +
Sbjct: 335 GYVQNKRMDDARQIFNQISIRDVVCWNTMIAGYSQCGRMDEALHLFKQMVKKDIVSWNTM 394

Query: 114 VDGFVEIGDLASAWQFFQRIPNPNVVSWVTMLCGFVRN 1
           V  + ++G + +A + F+ +   N+VSW +++ G  +N
Sbjct: 395 VASYAQVGQMDAAIKIFEEMKEKNIVSWNSLISGLTQN 432



 Score =  154 bits (389), Expect = 2e-35
 Identities = 75/225 (33%), Positives = 132/225 (58%)
 Frame = -3

Query: 684 NQKITQLGKSGRIEEAIKIFNQMPVRNTVTYNSMISVYAKNGRIRDAHELFDRMPNRNLV 505
           N  +    K+ + +EA ++F+ MP ++ V++NSM++ Y +NG +R   + F+ M  R++V
Sbjct: 144 NAMVAGYAKNRQFDEARRLFDAMPAKDLVSWNSMLTGYTRNGEMRLGLQFFEEMAERDVV 203

Query: 504 SWNTMISGCLHNDNVEKACELFHKMPQRDYFSWTLMITCYTRHGDLEKARKLFDLLPDKR 325
           SWN M+ G +   ++  + E F K+P  +  SW  M+  + R G + +AR+LFD +P  R
Sbjct: 204 SWNLMVDGFVEVGDLNSSWEFFEKIPNPNTVSWVTMLCGFARFGKIAEARRLFDQMP-IR 262

Query: 324 NPACWNAMISGYAKSRHLRDARELFDEMSVKNLISWNSMLAGYTQNGEMLLGLKFFEEMV 145
           N   WNAMI+ Y ++ H+ +A  LF EM  KN ISW +++ GY + G++    +   +M 
Sbjct: 263 NVVAWNAMIAAYVQNCHVDEAISLFMEMPEKNSISWTTVINGYVRMGKLDEARQLLNQMP 322

Query: 144 DKDVVSWNLLVDGFVEIGDLASAWQFFQRIPNPNVVSWVTMLCGF 10
            ++V +   ++ G+V+   +  A Q F +I   +VV W TM+ G+
Sbjct: 323 YRNVAAQTAMISGYVQNKRMDDARQIFNQISIRDVVCWNTMIAGY 367



 Score =  131 bits (329), Expect = 2e-28
 Identities = 75/267 (28%), Positives = 141/267 (52%), Gaps = 39/267 (14%)
 Frame = -3

Query: 684  NQKITQLGKSGRIEEAIKIFNQMPVRNTVTYNSMISVYAKNGRIRDAHELFDRMPNRNLV 505
            N  I    ++  ++EAI +F +MP +N++++ ++I+ Y + G++ +A +L ++MP RN+ 
Sbjct: 268  NAMIAAYVQNCHVDEAISLFMEMPEKNSISWTTVINGYVRMGKLDEARQLLNQMPYRNVA 327

Query: 504  SWNTMISGCLHNDNVEKACELFHKMPQRDYFSWTLMITCYTRHGDLEKARKLFDLLPDKR 325
            +   MISG + N  ++ A ++F+++  RD   W  MI  Y++ G +++A  LF  +  K+
Sbjct: 328  AQTAMISGYVQNKRMDDARQIFNQISIRDVVCWNTMIAGYSQCGRMDEALHLFKQMV-KK 386

Query: 324  NPACWNAMISGYAKSRHLRDARELFDEMSVKNLISWNSMLAGYTQNGEMLLGLKFF---- 157
            +   WN M++ YA+   +  A ++F+EM  KN++SWNS+++G TQNG  L  LK F    
Sbjct: 387  DIVSWNTMVASYAQVGQMDAAIKIFEEMKEKNIVSWNSLISGLTQNGSYLDALKSFMLMG 446

Query: 156  ------------------------------EEMVDK-----DVVSWNLLVDGFVEIGDLA 82
                                           ++V K     D+   N L+  + + G ++
Sbjct: 447  HEGQKPDQSTFACGLSSCAHLAALQVGKQLHQLVMKSGYATDLFVSNALITMYAKCGSIS 506

Query: 81   SAWQFFQRIPNPNVVSWVTMLCGFVRN 1
            SA   F+ I + +VVSW +++  +  N
Sbjct: 507  SAELLFKDIDHFDVVSWNSLIAAYALN 533



 Score =  102 bits (255), Expect = 6e-20
 Identities = 64/221 (28%), Positives = 112/221 (50%), Gaps = 38/221 (17%)
 Frame = -3

Query: 696 VFQQNQKITQLGKSGRIEEAIKIFNQMPVRNTVTYNSMISVYAKNGRIRDAHELFDRMPN 517
           V  Q   I+   ++ R+++A +IFNQ+ +R+ V +N+MI+ Y++ GR+ +A  LF +M  
Sbjct: 326 VAAQTAMISGYVQNKRMDDARQIFNQISIRDVVCWNTMIAGYSQCGRMDEALHLFKQMVK 385

Query: 516 RNLVSWNTMISGCLHNDNVEKACELFHKMPQRDYFSWTLMITCYTRHGDLEKARKLFDLL 337
           +++VSWNTM++       ++ A ++F +M +++  SW  +I+  T++G    A K F L+
Sbjct: 386 KDIVSWNTMVASYAQVGQMDAAIKIFEEMKEKNIVSWNSLISGLTQNGSYLDALKSFMLM 445

Query: 336 ------PDKRNPACW--------------------------------NAMISGYAKSRHL 271
                 PD+   AC                                 NA+I+ YAK   +
Sbjct: 446 GHEGQKPDQSTFACGLSSCAHLAALQVGKQLHQLVMKSGYATDLFVSNALITMYAKCGSI 505

Query: 270 RDARELFDEMSVKNLISWNSMLAGYTQNGEMLLGLKFFEEM 148
             A  LF ++   +++SWNS++A Y  NG     LK F +M
Sbjct: 506 SSAELLFKDIDHFDVVSWNSLIAAYALNGNGREALKLFHKM 546



 Score = 65.5 bits (158), Expect = 1e-08
 Identities = 29/103 (28%), Positives = 58/103 (56%)
 Frame = -3

Query: 309 NAMISGYAKSRHLRDARELFDEMSVKNLISWNSMLAGYTQNGEMLLGLKFFEEMVDKDVV 130
           N  I+   KS  + +A ++F  M+ KN ++ NSM++ + +NG +    + F+ M  +++V
Sbjct: 19  NLKITQLGKSGQIDEAIKVFQHMTHKNTVTHNSMISAFAKNGRISDARQLFDGMPQRNIV 78

Query: 129 SWNLLVDGFVEIGDLASAWQFFQRIPNPNVVSWVTMLCGFVRN 1
           SWN ++  ++    +  A Q F ++P  ++ SW  M+  + RN
Sbjct: 79  SWNSMIAAYLHNDRVEEARQLFDKMPTRDLYSWTLMITCYTRN 121


>ref|XP_004149535.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Cucumis sativus]
          Length = 741

 Score =  334 bits (857), Expect = 9e-90
 Identities = 159/234 (67%), Positives = 196/234 (83%)
 Frame = -3

Query: 711 ENGSLVFQQNQKITQLGKSGRIEEAIKIFNQMPVRNTVTYNSMISVYAKNGRIRDAHELF 532
           E GS VF QN +I+QLG+SGRIEEA+ +F QM  RN VTYNSMIS YAKNGRI +A ELF
Sbjct: 10  EKGSYVFTQNLRISQLGRSGRIEEAVAVFLQMTERNIVTYNSMISAYAKNGRIANARELF 69

Query: 531 DRMPNRNLVSWNTMISGCLHNDNVEKACELFHKMPQRDYFSWTLMITCYTRHGDLEKARK 352
           D MP RNLVSWN+MI+G LHN+ VE A  LF +M +RD +SWTLMITCYTR G+LEKAR+
Sbjct: 70  DLMPQRNLVSWNSMIAGYLHNELVEDAARLFDRMFKRDIYSWTLMITCYTRIGELEKARE 129

Query: 351 LFDLLPDKRNPACWNAMISGYAKSRHLRDARELFDEMSVKNLISWNSMLAGYTQNGEMLL 172
           LF+LLPDK++  C NA+I+GYAK R  R+A++LFDEM VKN++SWNS+L+GYT+NG+M L
Sbjct: 130 LFNLLPDKQDTVCRNALIAGYAKKRLFREAKKLFDEMLVKNVVSWNSILSGYTKNGKMQL 189

Query: 171 GLKFFEEMVDKDVVSWNLLVDGFVEIGDLASAWQFFQRIPNPNVVSWVTMLCGF 10
           GL+FFE M +++VVSWNL+VDG+V +GDL SAW FF++IP PNVVSWVTML GF
Sbjct: 190 GLQFFEAMGERNVVSWNLMVDGYVGVGDLDSAWMFFKKIPTPNVVSWVTMLSGF 243



 Score =  180 bits (457), Expect = 2e-43
 Identities = 86/218 (39%), Positives = 138/218 (63%)
 Frame = -3

Query: 654 GRIEEAIKIFNQMPVRNTVTYNSMISVYAKNGRIRDAHELFDRMPNRNLVSWNTMISGCL 475
           G ++ A   F ++P  N V++ +M+S +A  GR+ +A  LF+ MP +NLVSWN MI   +
Sbjct: 216 GDLDSAWMFFKKIPTPNVVSWVTMLSGFAHYGRMTEARNLFNEMPTKNLVSWNAMIGAYV 275

Query: 474 HNDNVEKACELFHKMPQRDYFSWTLMITCYTRHGDLEKARKLFDLLPDKRNPACWNAMIS 295
             + ++ A +LF +MP++D  SWT MI  Y R G L +AR++ +L+P K N A   AMI+
Sbjct: 276 RENQIDDAYKLFMEMPEKDSVSWTAMINGYVRVGKLLQAREILNLMPYK-NIAAQTAMIN 334

Query: 294 GYAKSRHLRDARELFDEMSVKNLISWNSMLAGYTQNGEMLLGLKFFEEMVDKDVVSWNLL 115
           GY +S  + +A E+F ++SV++ + WNSM+ GY   G     L+ F+EMV KD+VSWN +
Sbjct: 335 GYLQSGRMDEANEIFSQISVRDSVCWNSMITGYAHCGRTDEALRLFQEMVCKDMVSWNTM 394

Query: 114 VDGFVEIGDLASAWQFFQRIPNPNVVSWVTMLCGFVRN 1
           +  + + G +  A + F  +   NVVSW +++ G+V+N
Sbjct: 395 IAAYAQAGQMDKALEMFNEMQERNVVSWNSLITGYVQN 432



 Score =  115 bits (287), Expect = 1e-23
 Identities = 70/215 (32%), Positives = 115/215 (53%), Gaps = 38/215 (17%)
 Frame = -3

Query: 660 KSGRIEEAIKIFNQMPVRNTVTYNSMISVYAKNGRIRDAHELFDRMPNRNLVSWNTMISG 481
           +SGR++EA +IF+Q+ VR++V +NSMI+ YA  GR  +A  LF  M  +++VSWNTMI+ 
Sbjct: 338 QSGRMDEANEIFSQISVRDSVCWNSMITGYAHCGRTDEALRLFQEMVCKDMVSWNTMIAA 397

Query: 480 CLHNDNVEKACELFHKMPQRDYFSWTLMITCYTRHGDLEKARKLFDLL------PDKRNP 319
                 ++KA E+F++M +R+  SW  +IT Y ++G   +A   F L+      PD+   
Sbjct: 398 YAQAGQMDKALEMFNEMQERNVVSWNSLITGYVQNGLYFEALNCFILMKQQGEKPDQTTI 457

Query: 318 ACW--------------------------------NAMISGYAKSRHLRDARELFDEMSV 235
            C                                 NA+++ YAKS  + +A  +F E+  
Sbjct: 458 VCCLRASANLAALNVGVQLHHLTIKTGFGNDLFVKNAILTMYAKSGRVPEAENVFAEIKN 517

Query: 234 KNLISWNSMLAGYTQNGEMLLGLKFFEEMVDKDVV 130
           K+++SWNS++AGY  NG     ++ FE M  + ++
Sbjct: 518 KDVVSWNSLIAGYALNGCGKEAVELFEVMPLRGII 552



 Score =  105 bits (262), Expect = 9e-21
 Identities = 58/167 (34%), Positives = 95/167 (56%), Gaps = 1/167 (0%)
 Frame = -3

Query: 498 NTMISGCLHNDNVEKACELFHKMPQRDYFSWTLMITCYTRHGDLEKARKLFDLLPDKRNP 319
           N  IS    +  +E+A  +F +M +R+  ++  MI+ Y ++G +  AR+LFDL+P +RN 
Sbjct: 19  NLRISQLGRSGRIEEAVAVFLQMTERNIVTYNSMISAYAKNGRIANARELFDLMP-QRNL 77

Query: 318 ACWNAMISGYAKSRHLRDARELFDEMSVKNLISWNSMLAGYTQNGEMLLGLKFFEEMVDK 139
             WN+MI+GY  +  + DA  LFD M  +++ SW  M+  YT+ GE+    + F  + DK
Sbjct: 78  VSWNSMIAGYLHNELVEDAARLFDRMFKRDIYSWTLMITCYTRIGELEKARELFNLLPDK 137

Query: 138 -DVVSWNLLVDGFVEIGDLASAWQFFQRIPNPNVVSWVTMLCGFVRN 1
            D V  N L+ G+ +      A + F  +   NVVSW ++L G+ +N
Sbjct: 138 QDTVCRNALIAGYAKKRLFREAKKLFDEMLVKNVVSWNSILSGYTKN 184



 Score = 69.3 bits (168), Expect = 7e-10
 Identities = 44/147 (29%), Positives = 80/147 (54%), Gaps = 11/147 (7%)
 Frame = -3

Query: 705 GSLVFQQNQKITQLGKSGRIEEAIKIFNQMPVRNTVTYNSMISVYAKNGRIRDAHELFDR 526
           G+ +F +N  +T   KSGR+ EA  +F ++  ++ V++NS+I+ YA NG  ++A ELF+ 
Sbjct: 486 GNDLFVKNAILTMYAKSGRVPEAENVFAEIKNKDVVSWNSLIAGYALNGCGKEAVELFEV 545

Query: 525 MPNRNL----VSWNTMISGCLHNDNVEKACELFHKM-------PQRDYFSWTLMITCYTR 379
           MP R +    V++  ++S C H   V++   LF  M       PQ ++++   +I    R
Sbjct: 546 MPLRGIIPDEVTFTGLLSACNHGGFVDQGLNLFKSMTETYSIKPQSEHYA--CVINLLGR 603

Query: 378 HGDLEKARKLFDLLPDKRNPACWNAMI 298
            G LE+A ++   +    +   W A++
Sbjct: 604 VGRLEEAVEIVQGMKTVSSAKIWGALL 630


>ref|XP_004162581.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g02750-like [Cucumis sativus]
          Length = 741

 Score =  333 bits (853), Expect = 3e-89
 Identities = 158/234 (67%), Positives = 196/234 (83%)
 Frame = -3

Query: 711 ENGSLVFQQNQKITQLGKSGRIEEAIKIFNQMPVRNTVTYNSMISVYAKNGRIRDAHELF 532
           E GS VF QN +I+QLG+SGRIEEA+ +F +M  RN VTYNSMIS YAKNGRI +A ELF
Sbjct: 10  EKGSYVFTQNLRISQLGRSGRIEEAVAVFLKMTERNIVTYNSMISAYAKNGRIANARELF 69

Query: 531 DRMPNRNLVSWNTMISGCLHNDNVEKACELFHKMPQRDYFSWTLMITCYTRHGDLEKARK 352
           D MP RNLVSWN+MI+G LHN+ VE A  LF +M +RD +SWTLMITCYTR G+LEKAR+
Sbjct: 70  DLMPQRNLVSWNSMIAGYLHNELVEDAARLFDRMFKRDIYSWTLMITCYTRIGELEKARE 129

Query: 351 LFDLLPDKRNPACWNAMISGYAKSRHLRDARELFDEMSVKNLISWNSMLAGYTQNGEMLL 172
           LF+LLPDK++  C NA+I+GYAK R  R+A++LFDEM VKN++SWNS+L+GYT+NG+M L
Sbjct: 130 LFNLLPDKQDTVCRNALIAGYAKKRLFREAKKLFDEMLVKNVVSWNSILSGYTKNGKMQL 189

Query: 171 GLKFFEEMVDKDVVSWNLLVDGFVEIGDLASAWQFFQRIPNPNVVSWVTMLCGF 10
           GL+FFE M +++VVSWNL+VDG+V +GDL SAW FF++IP PNVVSWVTML GF
Sbjct: 190 GLQFFEAMGERNVVSWNLMVDGYVGVGDLDSAWMFFKKIPTPNVVSWVTMLSGF 243



 Score =  180 bits (457), Expect = 2e-43
 Identities = 86/218 (39%), Positives = 138/218 (63%)
 Frame = -3

Query: 654 GRIEEAIKIFNQMPVRNTVTYNSMISVYAKNGRIRDAHELFDRMPNRNLVSWNTMISGCL 475
           G ++ A   F ++P  N V++ +M+S +A  GR+ +A  LF+ MP +NLVSWN MI   +
Sbjct: 216 GDLDSAWMFFKKIPTPNVVSWVTMLSGFAHYGRMTEARNLFNEMPTKNLVSWNAMIGAYV 275

Query: 474 HNDNVEKACELFHKMPQRDYFSWTLMITCYTRHGDLEKARKLFDLLPDKRNPACWNAMIS 295
             + ++ A +LF +MP++D  SWT MI  Y R G L +AR++ +L+P K N A   AMI+
Sbjct: 276 RENQIDDAYKLFMEMPEKDSVSWTAMINGYVRVGKLLQAREILNLMPYK-NIAAQTAMIN 334

Query: 294 GYAKSRHLRDARELFDEMSVKNLISWNSMLAGYTQNGEMLLGLKFFEEMVDKDVVSWNLL 115
           GY +S  + +A E+F ++SV++ + WNSM+ GY   G     L+ F+EMV KD+VSWN +
Sbjct: 335 GYLQSGRMDEANEIFSQISVRDSVCWNSMITGYAHCGRTDEALRLFQEMVCKDMVSWNTM 394

Query: 114 VDGFVEIGDLASAWQFFQRIPNPNVVSWVTMLCGFVRN 1
           +  + + G +  A + F  +   NVVSW +++ G+V+N
Sbjct: 395 IAAYAQAGQMDKALEMFNEMQERNVVSWNSLITGYVQN 432



 Score =  115 bits (289), Expect = 7e-24
 Identities = 70/215 (32%), Positives = 115/215 (53%), Gaps = 38/215 (17%)
 Frame = -3

Query: 660 KSGRIEEAIKIFNQMPVRNTVTYNSMISVYAKNGRIRDAHELFDRMPNRNLVSWNTMISG 481
           +SGR++EA +IF+Q+ VR++V +NSMI+ YA  GR  +A  LF  M  +++VSWNTMI+ 
Sbjct: 338 QSGRMDEANEIFSQISVRDSVCWNSMITGYAHCGRTDEALRLFQEMVCKDMVSWNTMIAA 397

Query: 480 CLHNDNVEKACELFHKMPQRDYFSWTLMITCYTRHGDLEKARKLFDLL------PDKRNP 319
                 ++KA E+F++M +R+  SW  +IT Y ++G   +A   F L+      PD+   
Sbjct: 398 YAQAGQMDKALEMFNEMQERNVVSWNSLITGYVQNGLYFEALNCFILMKQQGEKPDQTTI 457

Query: 318 ACW--------------------------------NAMISGYAKSRHLRDARELFDEMSV 235
            C                                 NA+++ YAKS  + +A  +F E+  
Sbjct: 458 VCCLRASANLAALNVGVQLHHLTIKTGFGNDLFVKNAILTMYAKSGRVPEAENVFAEIKX 517

Query: 234 KNLISWNSMLAGYTQNGEMLLGLKFFEEMVDKDVV 130
           K+++SWNS++AGY  NG     ++ FE M  + ++
Sbjct: 518 KDVVSWNSLIAGYALNGCGKEAVELFEVMPLRGII 552



 Score =  107 bits (266), Expect = 3e-21
 Identities = 59/167 (35%), Positives = 95/167 (56%), Gaps = 1/167 (0%)
 Frame = -3

Query: 498 NTMISGCLHNDNVEKACELFHKMPQRDYFSWTLMITCYTRHGDLEKARKLFDLLPDKRNP 319
           N  IS    +  +E+A  +F KM +R+  ++  MI+ Y ++G +  AR+LFDL+P +RN 
Sbjct: 19  NLRISQLGRSGRIEEAVAVFLKMTERNIVTYNSMISAYAKNGRIANARELFDLMP-QRNL 77

Query: 318 ACWNAMISGYAKSRHLRDARELFDEMSVKNLISWNSMLAGYTQNGEMLLGLKFFEEMVDK 139
             WN+MI+GY  +  + DA  LFD M  +++ SW  M+  YT+ GE+    + F  + DK
Sbjct: 78  VSWNSMIAGYLHNELVEDAARLFDRMFKRDIYSWTLMITCYTRIGELEKARELFNLLPDK 137

Query: 138 -DVVSWNLLVDGFVEIGDLASAWQFFQRIPNPNVVSWVTMLCGFVRN 1
            D V  N L+ G+ +      A + F  +   NVVSW ++L G+ +N
Sbjct: 138 QDTVCRNALIAGYAKKRLFREAKKLFDEMLVKNVVSWNSILSGYTKN 184



 Score = 70.1 bits (170), Expect = 4e-10
 Identities = 44/147 (29%), Positives = 80/147 (54%), Gaps = 11/147 (7%)
 Frame = -3

Query: 705 GSLVFQQNQKITQLGKSGRIEEAIKIFNQMPVRNTVTYNSMISVYAKNGRIRDAHELFDR 526
           G+ +F +N  +T   KSGR+ EA  +F ++  ++ V++NS+I+ YA NG  ++A ELF+ 
Sbjct: 486 GNDLFVKNAILTMYAKSGRVPEAENVFAEIKXKDVVSWNSLIAGYALNGCGKEAVELFEV 545

Query: 525 MPNRNL----VSWNTMISGCLHNDNVEKACELFHKM-------PQRDYFSWTLMITCYTR 379
           MP R +    V++  ++S C H   V++   LF  M       PQ ++++   +I    R
Sbjct: 546 MPLRGIIPDEVTFTGLLSACNHGGFVDQGLNLFKSMTETYSIKPQSEHYA--CVINLLGR 603

Query: 378 HGDLEKARKLFDLLPDKRNPACWNAMI 298
            G LE+A ++   +    +   W A++
Sbjct: 604 VGRLEEAVEIVQGMKTVSSAKIWGALL 630


>ref|XP_003538894.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Glycine max]
          Length = 748

 Score =  322 bits (824), Expect = 6e-86
 Identities = 152/236 (64%), Positives = 189/236 (80%)
 Frame = -3

Query: 711 ENGSLVFQQNQKITQLGKSGRIEEAIKIFNQMPVRNTVTYNSMISVYAKNGRIRDAHELF 532
           E G   F  N++I QLGK G++EEAI+IF  M  +N VTYNSMISV AKN RIRDA +LF
Sbjct: 12  EAGKHAFNHNRQIIQLGKLGKVEEAIRIFFNMTHKNLVTYNSMISVLAKNARIRDARQLF 71

Query: 531 DRMPNRNLVSWNTMISGCLHNDNVEKACELFHKMPQRDYFSWTLMITCYTRHGDLEKARK 352
           D+M  RNLVSWNTMI+G LHN+ VE+A ELF  MP+RD FSW LMITCYTR G LEKAR+
Sbjct: 72  DQMSLRNLVSWNTMIAGYLHNNMVEEASELFDVMPERDNFSWALMITCYTRKGKLEKARE 131

Query: 351 LFDLLPDKRNPACWNAMISGYAKSRHLRDARELFDEMSVKNLISWNSMLAGYTQNGEMLL 172
           L +L+PDK + ACWNAMI+GYAK     DA+++F++M  K+L+S+NSMLAGYTQNG+M L
Sbjct: 132 LLELVPDKLDTACWNAMIAGYAKKGQFNDAKKVFEQMPAKDLVSYNSMLAGYTQNGKMHL 191

Query: 171 GLKFFEEMVDKDVVSWNLLVDGFVEIGDLASAWQFFQRIPNPNVVSWVTMLCGFVR 4
            L+FFE M +++VVSWNL+V G+V+ GDL+SAWQ F++IPNPN VSWVTMLCG  +
Sbjct: 192 ALQFFESMTERNVVSWNLMVAGYVKSGDLSSAWQLFEKIPNPNAVSWVTMLCGLAK 247



 Score =  173 bits (439), Expect = 3e-41
 Identities = 83/232 (35%), Positives = 146/232 (62%)
 Frame = -3

Query: 696 VFQQNQKITQLGKSGRIEEAIKIFNQMPVRNTVTYNSMISVYAKNGRIRDAHELFDRMPN 517
           V   N  +    KSG +  A ++F ++P  N V++ +M+   AK G++ +A ELFDRMP+
Sbjct: 204 VVSWNLMVAGYVKSGDLSSAWQLFEKIPNPNAVSWVTMLCGLAKYGKMAEARELFDRMPS 263

Query: 516 RNLVSWNTMISGCLHNDNVEKACELFHKMPQRDYFSWTLMITCYTRHGDLEKARKLFDLL 337
           +N+VSWN MI+  + +  V++A +LF KMP +D  SWT +I  Y R G L++AR++++ +
Sbjct: 264 KNVVSWNAMIATYVQDLQVDEAVKLFKKMPHKDSVSWTTIINGYIRVGKLDEARQVYNQM 323

Query: 336 PDKRNPACWNAMISGYAKSRHLRDARELFDEMSVKNLISWNSMLAGYTQNGEMLLGLKFF 157
           P K +     A++SG  ++  + +A ++F  +   +++ WNSM+AGY+++G M   L  F
Sbjct: 324 PCK-DITAQTALMSGLIQNGRIDEADQMFSRIGAHDVVCWNSMIAGYSRSGRMDEALNLF 382

Query: 156 EEMVDKDVVSWNLLVDGFVEIGDLASAWQFFQRIPNPNVVSWVTMLCGFVRN 1
            +M  K+ VSWN ++ G+ + G +  A + FQ +   N+VSW +++ GF++N
Sbjct: 383 RQMPIKNSVSWNTMISGYAQAGQMDRATEIFQAMREKNIVSWNSLIAGFLQN 434



 Score =  162 bits (411), Expect = 5e-38
 Identities = 79/228 (34%), Positives = 137/228 (60%)
 Frame = -3

Query: 684 NQKITQLGKSGRIEEAIKIFNQMPVRNTVTYNSMISVYAKNGRIRDAHELFDRMPNRNLV 505
           N  I    K G+  +A K+F QMP ++ V+YNSM++ Y +NG++  A + F+ M  RN+V
Sbjct: 146 NAMIAGYAKKGQFNDAKKVFEQMPAKDLVSYNSMLAGYTQNGKMHLALQFFESMTERNVV 205

Query: 504 SWNTMISGCLHNDNVEKACELFHKMPQRDYFSWTLMITCYTRHGDLEKARKLFDLLPDKR 325
           SWN M++G + + ++  A +LF K+P  +  SW  M+    ++G + +AR+LFD +P K 
Sbjct: 206 SWNLMVAGYVKSGDLSSAWQLFEKIPNPNAVSWVTMLCGLAKYGKMAEARELFDRMPSK- 264

Query: 324 NPACWNAMISGYAKSRHLRDARELFDEMSVKNLISWNSMLAGYTQNGEMLLGLKFFEEMV 145
           N   WNAMI+ Y +   + +A +LF +M  K+ +SW +++ GY + G++    + + +M 
Sbjct: 265 NVVSWNAMIATYVQDLQVDEAVKLFKKMPHKDSVSWTTIINGYIRVGKLDEARQVYNQMP 324

Query: 144 DKDVVSWNLLVDGFVEIGDLASAWQFFQRIPNPNVVSWVTMLCGFVRN 1
            KD+ +   L+ G ++ G +  A Q F RI   +VV W +M+ G+ R+
Sbjct: 325 CKDITAQTALMSGLIQNGRIDEADQMFSRIGAHDVVCWNSMIAGYSRS 372



 Score =  109 bits (273), Expect = 5e-22
 Identities = 65/194 (33%), Positives = 109/194 (56%), Gaps = 9/194 (4%)
 Frame = -3

Query: 684 NQKITQLGKSGRIEEAIKIFNQMPVRNTVTYNSMISVYAKNGRIRDAHELFDRMPNRNLV 505
           N  I    +SGR++EA+ +F QMP++N+V++N+MIS YA+ G++  A E+F  M  +N+V
Sbjct: 363 NSMIAGYSRSGRMDEALNLFRQMPIKNSVSWNTMISGYAQAGQMDRATEIFQAMREKNIV 422

Query: 504 SWNTMISGCLHNDNVEKACELF------HKMPQRDYFSWTLMITCYTRHGDLEKARKLFD 343
           SWN++I+G L N+    A +         K P +  F+ TL  +       L+   +L +
Sbjct: 423 SWNSLIAGFLQNNLYLDALKSLVMMGKEGKKPDQSTFACTL--SACANLAALQVGNQLHE 480

Query: 342 LLPDK---RNPACWNAMISGYAKSRHLRDARELFDEMSVKNLISWNSMLAGYTQNGEMLL 172
            +       +    NA+I+ YAK   ++ A ++F ++   +LISWNS+++GY  NG    
Sbjct: 481 YILKSGYMNDLFVGNALIAMYAKCGRVQSAEQVFRDIECVDLISWNSLISGYALNGYANK 540

Query: 171 GLKFFEEMVDKDVV 130
             K FE+M  + VV
Sbjct: 541 AFKAFEQMSSERVV 554


>ref|XP_003612258.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355513593|gb|AES95216.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 907

 Score =  311 bits (798), Expect = 6e-83
 Identities = 146/237 (61%), Positives = 188/237 (79%)
 Frame = -3

Query: 711 ENGSLVFQQNQKITQLGKSGRIEEAIKIFNQMPVRNTVTYNSMISVYAKNGRIRDAHELF 532
           E    VF QN+KI  LGK G+I+EA ++F+ +  +N  TYNSM++V+AKNGR+ DA +LF
Sbjct: 12  EQSKNVFNQNKKIIYLGKQGKIDEAKRVFSNVIHKNHATYNSMVTVFAKNGRVSDARQLF 71

Query: 531 DRMPNRNLVSWNTMISGCLHNDNVEKACELFHKMPQRDYFSWTLMITCYTRHGDLEKARK 352
           D+M  RNLVSWNTMI+G LHN+ VE+A +LF  M +RD FSW LMITCYTR G LEKAR+
Sbjct: 72  DKMSQRNLVSWNTMIAGYLHNNMVEEAHKLFDLMAERDNFSWALMITCYTRKGMLEKARE 131

Query: 351 LFDLLPDKRNPACWNAMISGYAKSRHLRDARELFDEMSVKNLISWNSMLAGYTQNGEMLL 172
           LF+L+PDK + ACWNAMI+GYAK     DA ++F++M VK+L+S+NSMLAGYTQNG+M L
Sbjct: 132 LFELVPDKLDTACWNAMIAGYAKKGRFDDAEKVFEKMPVKDLVSYNSMLAGYTQNGKMGL 191

Query: 171 GLKFFEEMVDKDVVSWNLLVDGFVEIGDLASAWQFFQRIPNPNVVSWVTMLCGFVRN 1
            +KFFE M +++VVSWNL+V GFV   DL SAW+ F++IP+PN VSWVTMLCGF R+
Sbjct: 192 AMKFFERMAERNVVSWNLMVAGFVNNCDLGSAWELFEKIPDPNAVSWVTMLCGFARH 248



 Score =  174 bits (441), Expect = 2e-41
 Identities = 96/290 (33%), Positives = 152/290 (52%), Gaps = 62/290 (21%)
 Frame = -3

Query: 684  NQKITQLGKSGRIEEAIKIFNQMPVRNTVTYNSMISVYAKNGRIRDAHELFDRMPNRNLV 505
            N  I    K GR ++A K+F +MPV++ V+YNSM++ Y +NG++  A + F+RM  RN+V
Sbjct: 146  NAMIAGYAKKGRFDDAEKVFEKMPVKDLVSYNSMLAGYTQNGKMGLAMKFFERMAERNVV 205

Query: 504  SWNTMISGCLHNDNVEKACELFHKMPQRDYFSWTLMITCYTRHGDLEKARKLFDLLPDKR 325
            SWN M++G ++N ++  A ELF K+P  +  SW  M+  + RHG + +ARKLFD +P K 
Sbjct: 206  SWNLMVAGFVNNCDLGSAWELFEKIPDPNAVSWVTMLCGFARHGKIVEARKLFDRMPCK- 264

Query: 324  NPACWNAM-------------------------------ISGYAKSRHLRDARELFDEMS 238
            N   WNAM                               I+GY +   L +ARE++++M 
Sbjct: 265  NVVSWNAMIAAYVQDLQIDEAVKLFKETPYKDCVSWTTMINGYVRVGKLDEAREVYNQMP 324

Query: 237  VKNL-------------------------------ISWNSMLAGYTQNGEMLLGLKFFEE 151
             K++                               I WNSM+AGY Q+G M   L  F +
Sbjct: 325  YKDVAAKTALMSGLIQNGRIDEASQVFSQLNKRDAICWNSMIAGYCQSGRMSEALNLFRQ 384

Query: 150  MVDKDVVSWNLLVDGFVEIGDLASAWQFFQRIPNPNVVSWVTMLCGFVRN 1
            M  K+ VSWN ++ G+ + G++  A + F+ +   NV+SW +++ GF++N
Sbjct: 385  MPVKNAVSWNTMISGYAQAGEMDRATEIFEAMGVRNVISWNSLITGFLQN 434



 Score =  158 bits (399), Expect = 1e-36
 Identities = 74/190 (38%), Positives = 131/190 (68%)
 Frame = -3

Query: 660 KSGRIEEAIKIFNQMPVRNTVTYNSMISVYAKNGRIRDAHELFDRMPNRNLVSWNTMISG 481
           + G+I EA K+F++MP +N V++N+MI+ Y ++ +I +A +LF   P ++ VSW TMI+G
Sbjct: 247 RHGKIVEARKLFDRMPCKNVVSWNAMIAAYVQDLQIDEAVKLFKETPYKDCVSWTTMING 306

Query: 480 CLHNDNVEKACELFHKMPQRDYFSWTLMITCYTRHGDLEKARKLFDLLPDKRNPACWNAM 301
            +    +++A E++++MP +D  + T +++   ++G +++A ++F  L +KR+  CWN+M
Sbjct: 307 YVRVGKLDEAREVYNQMPYKDVAAKTALMSGLIQNGRIDEASQVFSQL-NKRDAICWNSM 365

Query: 300 ISGYAKSRHLRDARELFDEMSVKNLISWNSMLAGYTQNGEMLLGLKFFEEMVDKDVVSWN 121
           I+GY +S  + +A  LF +M VKN +SWN+M++GY Q GEM    + FE M  ++V+SWN
Sbjct: 366 IAGYCQSGRMSEALNLFRQMPVKNAVSWNTMISGYAQAGEMDRATEIFEAMGVRNVISWN 425

Query: 120 LLVDGFVEIG 91
            L+ GF++ G
Sbjct: 426 SLITGFLQNG 435



 Score =  134 bits (337), Expect = 2e-29
 Identities = 76/271 (28%), Positives = 141/271 (52%), Gaps = 39/271 (14%)
 Frame = -3

Query: 696  VFQQNQKITQLGKSGRIEEAIKIFNQMPVRNTVTYNSMISVYAKNGRIRDAHELFDRMPN 517
            V   N  I    +  +I+EA+K+F + P ++ V++ +MI+ Y + G++ +A E++++MP 
Sbjct: 266  VVSWNAMIAAYVQDLQIDEAVKLFKETPYKDCVSWTTMINGYVRVGKLDEAREVYNQMPY 325

Query: 516  RNLVSWNTMISGCLHNDNVEKACELFHKMPQRDYFSWTLMITCYTRHGDLEKARKLFDLL 337
            +++ +   ++SG + N  +++A ++F ++ +RD   W  MI  Y + G + +A  LF  +
Sbjct: 326  KDVAAKTALMSGLIQNGRIDEASQVFSQLNKRDAICWNSMIAGYCQSGRMSEALNLFRQM 385

Query: 336  PDKRNPACWNAMISGYAKSRHLRDARELFDEMSVKNLISWNSMLAGYTQNGEMLLGLKF- 160
            P K N   WN MISGYA++  +  A E+F+ M V+N+ISWNS++ G+ QNG  L  LK  
Sbjct: 386  PVK-NAVSWNTMISGYAQAGEMDRATEIFEAMGVRNVISWNSLITGFLQNGLYLDALKSL 444

Query: 159  ---------------------------------FEEMVDK-----DVVSWNLLVDGFVEI 94
                                               E++ K     D+   N L+  + + 
Sbjct: 445  VLMGQEGKKPDQSTFACSLSSCANLAALQVGKQLHELILKSGYINDLFVSNALIAMYAKC 504

Query: 93   GDLASAWQFFQRIPNPNVVSWVTMLCGFVRN 1
            G + SA + F+ I   +++SW +++ G+  N
Sbjct: 505  GGVQSAEKVFKDIEGVDLISWNSLISGYALN 535



 Score =  111 bits (277), Expect = 2e-22
 Identities = 69/215 (32%), Positives = 111/215 (51%), Gaps = 38/215 (17%)
 Frame = -3

Query: 660 KSGRIEEAIKIFNQMPVRNTVTYNSMISVYAKNGRIRDAHELFDRMPNRNLVSWNTMISG 481
           ++GRI+EA ++F+Q+  R+ + +NSMI+ Y ++GR+ +A  LF +MP +N VSWNTMISG
Sbjct: 340 QNGRIDEASQVFSQLNKRDAICWNSMIAGYCQSGRMSEALNLFRQMPVKNAVSWNTMISG 399

Query: 480 CLHNDNVEKACELFHKMPQRDYFSWTLMITCYTRHGDLEKARKLFDLL------PDKRNP 319
                 +++A E+F  M  R+  SW  +IT + ++G    A K   L+      PD+   
Sbjct: 400 YAQAGEMDRATEIFEAMGVRNVISWNSLITGFLQNGLYLDALKSLVLMGQEGKKPDQSTF 459

Query: 318 ACW--------------------------------NAMISGYAKSRHLRDARELFDEMSV 235
           AC                                 NA+I+ YAK   ++ A ++F ++  
Sbjct: 460 ACSLSSCANLAALQVGKQLHELILKSGYINDLFVSNALIAMYAKCGGVQSAEKVFKDIEG 519

Query: 234 KNLISWNSMLAGYTQNGEMLLGLKFFEEMVDKDVV 130
            +LISWNS+++GY  NG        FE+M  +  V
Sbjct: 520 VDLISWNSLISGYALNGYANEAFWAFEQMSSEGTV 554