BLASTX nr result

ID: Panax21_contig00026055 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00026055
         (601 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002314701.1| predicted protein [Populus trichocarpa] gi|2...   252   3e-65
ref|XP_002282170.1| PREDICTED: uncharacterized protein LOC100247...   244   8e-63
ref|XP_002312528.1| predicted protein [Populus trichocarpa] gi|2...   243   2e-62
emb|CAN68227.1| hypothetical protein VITISV_040534 [Vitis vinifera]   240   1e-61
ref|XP_002517149.1| transporter, putative [Ricinus communis] gi|...   230   2e-58

>ref|XP_002314701.1| predicted protein [Populus trichocarpa] gi|222863741|gb|EEF00872.1|
           predicted protein [Populus trichocarpa]
          Length = 427

 Score =  252 bits (644), Expect = 3e-65
 Identities = 125/177 (70%), Positives = 141/177 (79%), Gaps = 5/177 (2%)
 Frame = +2

Query: 2   SSSRFSFTVAHHFDSVKPWYLSLTDTSASKVGPTNPSLLGPALIXXXXXXXXXXXXPTAR 181
           SSSRFSFTV+HHFDS+KPW+L+LTDTSASKVGPTN S LGPALI            P AR
Sbjct: 251 SSSRFSFTVSHHFDSLKPWHLTLTDTSASKVGPTNLSSLGPALISPLNARSFSFASPVAR 310

Query: 182 TPRGNIN-----TVVRKSFFPSTPLPQKTQKFDHTSIKQPRTPKHSFLQSPALFFKKDCH 346
           TPRG++N      + +KS FPSTPLPQ+    D   I QPRTP+ SFLQSPALFFKK+CH
Sbjct: 311 TPRGSMNGGSYTRLAQKSLFPSTPLPQRVTTSDTLKISQPRTPRPSFLQSPALFFKKECH 370

Query: 347 VSKSDKCRDSFGPFLKFYRRPYDEMTYRSKMRPPLGGLISIISPQLKRRHMSVSQRF 517
           VSK+D+ R+SF PFLKFYRRPYDEM YRSKMRPPLGGLISI+SP +KRRHMSVSQRF
Sbjct: 371 VSKADRSRESFVPFLKFYRRPYDEMIYRSKMRPPLGGLISIVSPHIKRRHMSVSQRF 427


>ref|XP_002282170.1| PREDICTED: uncharacterized protein LOC100247799 [Vitis vinifera]
           gi|297737041|emb|CBI26242.3| unnamed protein product
           [Vitis vinifera]
          Length = 423

 Score =  244 bits (623), Expect = 8e-63
 Identities = 126/181 (69%), Positives = 141/181 (77%), Gaps = 9/181 (4%)
 Frame = +2

Query: 2   SSSRFSFTVAHHFDSVKPWYLSLTDTSASKVGPTNPS--LLGPALIXXXXXXXXXXXXPT 175
           SSSRFSFTV+HHFDS+KPWYLSL DTS SKVGPT+PS  +LGPALI            P 
Sbjct: 243 SSSRFSFTVSHHFDSLKPWYLSLADTSGSKVGPTSPSPSMLGPALISPLNARSLSFASPA 302

Query: 176 ARTPRGNI-----NTVVRKSFFPSTPLPQKTQ--KFDHTSIKQPRTPKHSFLQSPALFFK 334
           ARTPRG I     +   +KS F STPLP++T   K D  SI  PRTP+ SFLQSPALFF+
Sbjct: 303 ARTPRGGIYGGSASRPAKKSLFASTPLPERTNYGKNDAMSINHPRTPRPSFLQSPALFFR 362

Query: 335 KDCHVSKSDKCRDSFGPFLKFYRRPYDEMTYRSKMRPPLGGLISIISPQLKRRHMSVSQR 514
           K+CHVS++DK R+SF PFLKFYRRPYDEM YRSKMRPPLGGLISI+SPQLKRRHMSVSQR
Sbjct: 363 KECHVSRADKSRESFLPFLKFYRRPYDEMIYRSKMRPPLGGLISIVSPQLKRRHMSVSQR 422

Query: 515 F 517
           F
Sbjct: 423 F 423


>ref|XP_002312528.1| predicted protein [Populus trichocarpa] gi|222852348|gb|EEE89895.1|
           predicted protein [Populus trichocarpa]
          Length = 429

 Score =  243 bits (619), Expect = 2e-62
 Identities = 120/177 (67%), Positives = 138/177 (77%), Gaps = 5/177 (2%)
 Frame = +2

Query: 2   SSSRFSFTVAHHFDSVKPWYLSLTDTSASKVGPTNPSLLGPALIXXXXXXXXXXXXPTAR 181
           SSSRFSFTV+HHFDS+KPW+LSLTDTS+SKVGPT+ S LGPAL+            P AR
Sbjct: 253 SSSRFSFTVSHHFDSLKPWHLSLTDTSSSKVGPTSLSHLGPALVSPLNARSYSFASPVAR 312

Query: 182 TPRGNINTV-----VRKSFFPSTPLPQKTQKFDHTSIKQPRTPKHSFLQSPALFFKKDCH 346
            PRG+IN        RKS FPSTPLPQ+  + D   I  PRTP+ SFLQSPALFFKK+CH
Sbjct: 313 APRGSINGCSYTRPTRKSLFPSTPLPQRVTEGDPIKISLPRTPRPSFLQSPALFFKKECH 372

Query: 347 VSKSDKCRDSFGPFLKFYRRPYDEMTYRSKMRPPLGGLISIISPQLKRRHMSVSQRF 517
           VSK+D+ R+SF PF KFYRRPYDEM YRSKMRPPLGGLISI+SP ++RRH+SVSQRF
Sbjct: 373 VSKADRSRESFVPFFKFYRRPYDEMIYRSKMRPPLGGLISIVSPHIRRRHVSVSQRF 429


>emb|CAN68227.1| hypothetical protein VITISV_040534 [Vitis vinifera]
          Length = 465

 Score =  240 bits (613), Expect = 1e-61
 Identities = 125/181 (69%), Positives = 140/181 (77%), Gaps = 9/181 (4%)
 Frame = +2

Query: 2   SSSRFSFTVAHHFDSVKPWYLSLTDTSASKVGPTNPS--LLGPALIXXXXXXXXXXXXPT 175
           SSSRFSFTV+HHFDS+KPWYLSL DTS SKVGPT+PS  +LGPALI            P 
Sbjct: 285 SSSRFSFTVSHHFDSLKPWYLSLADTSGSKVGPTSPSPSMLGPALISPLNARSLSFASPA 344

Query: 176 ARTPRGNI-----NTVVRKSFFPSTPLPQKTQ--KFDHTSIKQPRTPKHSFLQSPALFFK 334
           ARTPRG I     +   +KS F STPL ++T   K D  SI  PRTP+ SFLQSPALFF+
Sbjct: 345 ARTPRGGIYGGSASRPAKKSLFASTPLLERTNYGKNDAMSINHPRTPRPSFLQSPALFFR 404

Query: 335 KDCHVSKSDKCRDSFGPFLKFYRRPYDEMTYRSKMRPPLGGLISIISPQLKRRHMSVSQR 514
           K+CHVS++DK R+SF PFLKFYRRPYDEM YRSKMRPPLGGLISI+SPQLKRRHMSVSQR
Sbjct: 405 KECHVSRADKSRESFLPFLKFYRRPYDEMIYRSKMRPPLGGLISIVSPQLKRRHMSVSQR 464

Query: 515 F 517
           F
Sbjct: 465 F 465


>ref|XP_002517149.1| transporter, putative [Ricinus communis]
           gi|223543784|gb|EEF45312.1| transporter, putative
           [Ricinus communis]
          Length = 434

 Score =  230 bits (586), Expect = 2e-58
 Identities = 116/181 (64%), Positives = 137/181 (75%), Gaps = 9/181 (4%)
 Frame = +2

Query: 2   SSSRFSFTVAHHFDSVKPWYLSLTDTSASKVGP---TNPSLLGPALIXXXXXXXXXXXXP 172
           SSSRFSFTV+HHFDS+KPW+L+LTDTS+SKVG    T+P+LLGPA I            P
Sbjct: 254 SSSRFSFTVSHHFDSLKPWHLTLTDTSSSKVGSATTTSPALLGPAKISPLNARSYSFASP 313

Query: 173 TARTPRGNIN------TVVRKSFFPSTPLPQKTQKFDHTSIKQPRTPKHSFLQSPALFFK 334
            ARTP G+IN         +K+ FPSTPLPQ+    +   I  PRTP+ SFLQSPALFFK
Sbjct: 314 AARTPLGSINGDSYSCRPSKKTLFPSTPLPQRVTASEPIKISYPRTPRPSFLQSPALFFK 373

Query: 335 KDCHVSKSDKCRDSFGPFLKFYRRPYDEMTYRSKMRPPLGGLISIISPQLKRRHMSVSQR 514
           K+CHV ++DK R+SF PFLKFYRRPYDEM YRSKMRPPLGGLISI+SP ++RRH+SVSQR
Sbjct: 374 KECHVMRADKSRESFLPFLKFYRRPYDEMIYRSKMRPPLGGLISIVSPHIRRRHVSVSQR 433

Query: 515 F 517
           F
Sbjct: 434 F 434


Top