BLASTX nr result

ID: Panax21_contig00026028 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00026028
         (409 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633992.1| PREDICTED: exportin-1 isoform 3 [Vitis vinif...   264   5e-69
ref|XP_003633991.1| PREDICTED: exportin-1 isoform 2 [Vitis vinif...   264   5e-69
ref|XP_002520018.1| chromosome region maintenance protein 1/expo...   264   5e-69
ref|XP_002275630.1| PREDICTED: exportin-1 isoform 1 [Vitis vinif...   264   5e-69
ref|XP_003540169.1| PREDICTED: exportin-1-like isoform 3 [Glycin...   264   6e-69

>ref|XP_003633992.1| PREDICTED: exportin-1 isoform 3 [Vitis vinifera]
          Length = 1069

 Score =  264 bits (675), Expect = 5e-69
 Identities = 131/135 (97%), Positives = 134/135 (99%)
 Frame = -3

Query: 407 NIILVQVLKHEWPARWRSFIPDLVAAAKTSETICENCMAILKLLSEEVFDFSRGEMTQQK 228
           NIILVQVLKHEWPARWRSFIPDLV+AAKTSETICENCMAILKLLSEEVFDFSRGEMTQQK
Sbjct: 122 NIILVQVLKHEWPARWRSFIPDLVSAAKTSETICENCMAILKLLSEEVFDFSRGEMTQQK 181

Query: 227 IKELKQSLNSEFQLIHELCLYVLSASQRTELIRATLATLHAFLSWIPLGYIFESPLLETL 48
           IKELKQSLNSEFQLIHELCLYVLSASQRTELIRATLATLHAFLSWIPLGYIFESPLLETL
Sbjct: 182 IKELKQSLNSEFQLIHELCLYVLSASQRTELIRATLATLHAFLSWIPLGYIFESPLLETL 241

Query: 47  LNFFPLPAYRNLTLQ 3
           L FFP+P+YRNLTLQ
Sbjct: 242 LKFFPVPSYRNLTLQ 256


>ref|XP_003633991.1| PREDICTED: exportin-1 isoform 2 [Vitis vinifera]
          Length = 1061

 Score =  264 bits (675), Expect = 5e-69
 Identities = 131/135 (97%), Positives = 134/135 (99%)
 Frame = -3

Query: 407 NIILVQVLKHEWPARWRSFIPDLVAAAKTSETICENCMAILKLLSEEVFDFSRGEMTQQK 228
           NIILVQVLKHEWPARWRSFIPDLV+AAKTSETICENCMAILKLLSEEVFDFSRGEMTQQK
Sbjct: 122 NIILVQVLKHEWPARWRSFIPDLVSAAKTSETICENCMAILKLLSEEVFDFSRGEMTQQK 181

Query: 227 IKELKQSLNSEFQLIHELCLYVLSASQRTELIRATLATLHAFLSWIPLGYIFESPLLETL 48
           IKELKQSLNSEFQLIHELCLYVLSASQRTELIRATLATLHAFLSWIPLGYIFESPLLETL
Sbjct: 182 IKELKQSLNSEFQLIHELCLYVLSASQRTELIRATLATLHAFLSWIPLGYIFESPLLETL 241

Query: 47  LNFFPLPAYRNLTLQ 3
           L FFP+P+YRNLTLQ
Sbjct: 242 LKFFPVPSYRNLTLQ 256


>ref|XP_002520018.1| chromosome region maintenance protein 1/exportin, putative [Ricinus
           communis] gi|223540782|gb|EEF42342.1| chromosome region
           maintenance protein 1/exportin, putative [Ricinus
           communis]
          Length = 1069

 Score =  264 bits (675), Expect = 5e-69
 Identities = 130/135 (96%), Positives = 134/135 (99%)
 Frame = -3

Query: 407 NIILVQVLKHEWPARWRSFIPDLVAAAKTSETICENCMAILKLLSEEVFDFSRGEMTQQK 228
           NIILVQ+LKHEWPARWRSFIPDLVAAAKTSETICENCMAILKLLSEEVFDFSRGEMTQQK
Sbjct: 127 NIILVQILKHEWPARWRSFIPDLVAAAKTSETICENCMAILKLLSEEVFDFSRGEMTQQK 186

Query: 227 IKELKQSLNSEFQLIHELCLYVLSASQRTELIRATLATLHAFLSWIPLGYIFESPLLETL 48
           IKELKQSLNSEFQLIHELCLYVLSASQRTELIRATL+TLHAFLSWIPLGYIFESPLLETL
Sbjct: 187 IKELKQSLNSEFQLIHELCLYVLSASQRTELIRATLSTLHAFLSWIPLGYIFESPLLETL 246

Query: 47  LNFFPLPAYRNLTLQ 3
           L FFP+P+YRNLTLQ
Sbjct: 247 LKFFPMPSYRNLTLQ 261


>ref|XP_002275630.1| PREDICTED: exportin-1 isoform 1 [Vitis vinifera]
           gi|147799770|emb|CAN61845.1| hypothetical protein
           VITISV_008353 [Vitis vinifera]
           gi|297737334|emb|CBI26535.3| unnamed protein product
           [Vitis vinifera]
          Length = 1076

 Score =  264 bits (675), Expect = 5e-69
 Identities = 131/135 (97%), Positives = 134/135 (99%)
 Frame = -3

Query: 407 NIILVQVLKHEWPARWRSFIPDLVAAAKTSETICENCMAILKLLSEEVFDFSRGEMTQQK 228
           NIILVQVLKHEWPARWRSFIPDLV+AAKTSETICENCMAILKLLSEEVFDFSRGEMTQQK
Sbjct: 122 NIILVQVLKHEWPARWRSFIPDLVSAAKTSETICENCMAILKLLSEEVFDFSRGEMTQQK 181

Query: 227 IKELKQSLNSEFQLIHELCLYVLSASQRTELIRATLATLHAFLSWIPLGYIFESPLLETL 48
           IKELKQSLNSEFQLIHELCLYVLSASQRTELIRATLATLHAFLSWIPLGYIFESPLLETL
Sbjct: 182 IKELKQSLNSEFQLIHELCLYVLSASQRTELIRATLATLHAFLSWIPLGYIFESPLLETL 241

Query: 47  LNFFPLPAYRNLTLQ 3
           L FFP+P+YRNLTLQ
Sbjct: 242 LKFFPVPSYRNLTLQ 256


>ref|XP_003540169.1| PREDICTED: exportin-1-like isoform 3 [Glycine max]
          Length = 1065

 Score =  264 bits (674), Expect = 6e-69
 Identities = 130/135 (96%), Positives = 134/135 (99%)
 Frame = -3

Query: 407 NIILVQVLKHEWPARWRSFIPDLVAAAKTSETICENCMAILKLLSEEVFDFSRGEMTQQK 228
           NIILVQ+LKHEWPARWRSFIPDLV+AAKTSETICENCMAILKLLSEEVFDFSRGEMTQQK
Sbjct: 122 NIILVQILKHEWPARWRSFIPDLVSAAKTSETICENCMAILKLLSEEVFDFSRGEMTQQK 181

Query: 227 IKELKQSLNSEFQLIHELCLYVLSASQRTELIRATLATLHAFLSWIPLGYIFESPLLETL 48
           IKELKQSLNSEFQLIHELCLYVLSASQRTELIRATL+TLHAFLSWIPLGYIFESPLLETL
Sbjct: 182 IKELKQSLNSEFQLIHELCLYVLSASQRTELIRATLSTLHAFLSWIPLGYIFESPLLETL 241

Query: 47  LNFFPLPAYRNLTLQ 3
           L FFP+PAYRNLTLQ
Sbjct: 242 LKFFPVPAYRNLTLQ 256


Top