BLASTX nr result

ID: Panax21_contig00026010 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00026010
         (598 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632721.1| PREDICTED: thioredoxin-like 3-1, chloroplast...   155   5e-36
ref|XP_002275794.1| PREDICTED: thioredoxin-like 3-1, chloroplast...   155   5e-36
ref|XP_002534371.1| electron transporter, putative [Ricinus comm...   153   2e-35
ref|XP_002322732.1| predicted protein [Populus trichocarpa] gi|2...   136   3e-30
gb|AFK38238.1| unknown [Medicago truncatula]                          127   2e-27

>ref|XP_003632721.1| PREDICTED: thioredoxin-like 3-1, chloroplastic isoform 2 [Vitis
           vinifera]
          Length = 179

 Score =  155 bits (392), Expect = 5e-36
 Identities = 79/126 (62%), Positives = 96/126 (76%), Gaps = 2/126 (1%)
 Frame = +3

Query: 225 MSILAPNSHILYRETYQKDQHQQQLW--SCLNHPLKSYGFGFDQRKGSEWKKIVKRECRA 398
           MSILA N+HI+YRE   +D   Q     SCL    +S GFG D R+G EW+K  KR+ R 
Sbjct: 1   MSILAANTHIVYREVLLRDPQNQLSGGGSCLFWS-RSPGFGVDGRRG-EWRKTKKRDFRV 58

Query: 399 TAFFPDLSRPSFVEMEPITDCDHLDQILAKAKDNSQPIIIDWMAAWCRKCIYLKPKLEKL 578
            AF+PD++RP+ +EM+PI DCD LDQILA+A++  QPIIIDWMAAWCRKCIYLKPKLEKL
Sbjct: 59  EAFWPDMTRPNVIEMQPIKDCDQLDQILARAQELPQPIIIDWMAAWCRKCIYLKPKLEKL 118

Query: 579 AAEFDT 596
           AAE+DT
Sbjct: 119 AAEYDT 124


>ref|XP_002275794.1| PREDICTED: thioredoxin-like 3-1, chloroplastic isoform 1 [Vitis
           vinifera]
          Length = 185

 Score =  155 bits (392), Expect = 5e-36
 Identities = 79/126 (62%), Positives = 96/126 (76%), Gaps = 2/126 (1%)
 Frame = +3

Query: 225 MSILAPNSHILYRETYQKDQHQQQLW--SCLNHPLKSYGFGFDQRKGSEWKKIVKRECRA 398
           MSILA N+HI+YRE   +D   Q     SCL    +S GFG D R+G EW+K  KR+ R 
Sbjct: 1   MSILAANTHIVYREVLLRDPQNQLSGGGSCLFWS-RSPGFGVDGRRG-EWRKTKKRDFRV 58

Query: 399 TAFFPDLSRPSFVEMEPITDCDHLDQILAKAKDNSQPIIIDWMAAWCRKCIYLKPKLEKL 578
            AF+PD++RP+ +EM+PI DCD LDQILA+A++  QPIIIDWMAAWCRKCIYLKPKLEKL
Sbjct: 59  EAFWPDMTRPNVIEMQPIKDCDQLDQILARAQELPQPIIIDWMAAWCRKCIYLKPKLEKL 118

Query: 579 AAEFDT 596
           AAE+DT
Sbjct: 119 AAEYDT 124


>ref|XP_002534371.1| electron transporter, putative [Ricinus communis]
           gi|223525411|gb|EEF28009.1| electron transporter,
           putative [Ricinus communis]
          Length = 190

 Score =  153 bits (387), Expect = 2e-35
 Identities = 83/133 (62%), Positives = 98/133 (73%), Gaps = 9/133 (6%)
 Frame = +3

Query: 225 MSILAPNSHILYRETY-QKDQHQQ-QLWS-----CLNHPLKSYGFG--FDQRKGSEWKKI 377
           MS LA NSHILYRE Y Q+DQ QQ QLWS     CL    ++ G    FD +K   +KKI
Sbjct: 1   MSSLAANSHILYREVYNQRDQQQQHQLWSSSGSCCLLLQQRNSGCYNLFDCKKTRSFKKI 60

Query: 378 VKRECRATAFFPDLSRPSFVEMEPITDCDHLDQILAKAKDNSQPIIIDWMAAWCRKCIYL 557
            KR+ R  AF+PD++RP+ +EMEPI D D LDQIL KA++ SQP++IDWMAAWCRKCIYL
Sbjct: 61  SKRDLRVEAFWPDMTRPTSIEMEPINDSDQLDQILLKAQELSQPVLIDWMAAWCRKCIYL 120

Query: 558 KPKLEKLAAEFDT 596
           KPKLEKLA EFDT
Sbjct: 121 KPKLEKLAFEFDT 133


>ref|XP_002322732.1| predicted protein [Populus trichocarpa] gi|222867362|gb|EEF04493.1|
           predicted protein [Populus trichocarpa]
          Length = 194

 Score =  136 bits (342), Expect = 3e-30
 Identities = 74/133 (55%), Positives = 88/133 (66%), Gaps = 9/133 (6%)
 Frame = +3

Query: 225 MSILAPNSHILYRET-YQKDQHQQQLWS-------CLNHPLKSYGFG-FDQRKGSEWKKI 377
           MS+LA N H+LYRE  Y     QQQLWS        L     S+G   FD R     KK 
Sbjct: 1   MSVLAANPHVLYREVQYHNKDQQQQLWSGGGVGSSLLLSQRTSFGCSWFDGRNKDLCKKN 60

Query: 378 VKRECRATAFFPDLSRPSFVEMEPITDCDHLDQILAKAKDNSQPIIIDWMAAWCRKCIYL 557
            KR+ +  A +P ++RP+ VEMEPI D  HLD+IL +A + SQPIIIDWMA+WCRKCIYL
Sbjct: 61  SKRDLKVAASWPGMTRPTSVEMEPIDDSHHLDKILLQAHELSQPIIIDWMASWCRKCIYL 120

Query: 558 KPKLEKLAAEFDT 596
           KPKLEKLAAE+DT
Sbjct: 121 KPKLEKLAAEYDT 133


>gb|AFK38238.1| unknown [Medicago truncatula]
          Length = 176

 Score =  127 bits (318), Expect = 2e-27
 Identities = 70/126 (55%), Positives = 83/126 (65%), Gaps = 2/126 (1%)
 Frame = +3

Query: 225 MSILAPNSHILYRETYQKDQHQ-QQLWSCLNHPLKSYGFGFDQRKGSE-WKKIVKRECRA 398
           MSI+   SH LY+E Y +D+    Q ++     L      F    G E  KKI ++  R 
Sbjct: 1   MSIIGTYSHFLYKEVYHRDEQCIPQCFASGRDSLLCRKSCFGNIIGIEKQKKIRRKNLRV 60

Query: 399 TAFFPDLSRPSFVEMEPITDCDHLDQILAKAKDNSQPIIIDWMAAWCRKCIYLKPKLEKL 578
            A +PDLSRPS VEME I D + LDQIL  A+ NS+PI+IDWMAAWCRKCIYLKPKLEKL
Sbjct: 61  EAMWPDLSRPSSVEMEAIHDSEQLDQILVHAQQNSEPILIDWMAAWCRKCIYLKPKLEKL 120

Query: 579 AAEFDT 596
           AAEFDT
Sbjct: 121 AAEFDT 126


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