BLASTX nr result

ID: Panax21_contig00025906 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00025906
         (488 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281982.1| PREDICTED: copper transporter 5 [Vitis vinif...    59   4e-07
ref|XP_002516155.1| copper transporter, putative [Ricinus commun...    58   7e-07
tpg|DAA61652.1| TPA: hypothetical protein ZEAMMB73_044314 [Zea m...    56   4e-06
ref|XP_003578182.1| PREDICTED: copper transporter 5.1-like [Brac...    55   6e-06

>ref|XP_002281982.1| PREDICTED: copper transporter 5 [Vitis vinifera]
           gi|321496084|gb|ADW93919.1| copper transporter [Vitis
           vinifera]
          Length = 144

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 30/51 (58%), Positives = 38/51 (74%), Gaps = 1/51 (1%)
 Frame = -2

Query: 475 SSPHNFTTLLHPKLAAG-GRWSPAMFAGAILFGINASIGYLLMLAVMSYNG 326
           SSP + + +  P L +  GRWS   FAGA LFGIN++IGYL+MLAVMS+NG
Sbjct: 60  SSPASASPIEEPLLQSKIGRWSATKFAGAALFGINSAIGYLIMLAVMSFNG 110


>ref|XP_002516155.1| copper transporter, putative [Ricinus communis]
           gi|223544641|gb|EEF46157.1| copper transporter, putative
           [Ricinus communis]
          Length = 143

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 25/34 (73%), Positives = 31/34 (91%)
 Frame = -2

Query: 427 GGRWSPAMFAGAILFGINASIGYLLMLAVMSYNG 326
           GG+WS A  AGA+LFG+N++IGYLLMLAVMS+NG
Sbjct: 75  GGKWSVARVAGAVLFGVNSAIGYLLMLAVMSFNG 108


>tpg|DAA61652.1| TPA: hypothetical protein ZEAMMB73_044314 [Zea mays]
          Length = 155

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 31/55 (56%), Positives = 37/55 (67%), Gaps = 1/55 (1%)
 Frame = -2

Query: 487 ISSPSSPHNFTTLLHPKLAAG-GRWSPAMFAGAILFGINASIGYLLMLAVMSYNG 326
           I  P+     T LL P  AAG GRW PA  A A +FG+N+ +GYLLMLAVMS+NG
Sbjct: 67  IPPPAGSDPRTPLLAPAFAAGAGRW-PARLAVAAMFGVNSGLGYLLMLAVMSFNG 120


>ref|XP_003578182.1| PREDICTED: copper transporter 5.1-like [Brachypodium distachyon]
          Length = 151

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 30/43 (69%), Positives = 33/43 (76%), Gaps = 1/43 (2%)
 Frame = -2

Query: 451 LLHPKLA-AGGRWSPAMFAGAILFGINASIGYLLMLAVMSYNG 326
           LL P  A AGGRW PA  A A LFG+NA IGYLLMLA+MS+NG
Sbjct: 75  LLAPAAALAGGRW-PARVATAALFGVNAGIGYLLMLAIMSFNG 116


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