BLASTX nr result

ID: Panax21_contig00025894 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00025894
         (1271 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634688.1| PREDICTED: probable ADP-ribosylation factor ...   185   6e-46
ref|XP_002284562.1| PREDICTED: probable ADP-ribosylation factor ...   179   5e-44
ref|XP_003635314.1| PREDICTED: probable ADP-ribosylation factor ...   181   4e-43
ref|XP_002330426.1| predicted protein [Populus trichocarpa] gi|2...   157   5e-38
ref|XP_002316931.1| predicted protein [Populus trichocarpa] gi|2...   146   8e-35

>ref|XP_003634688.1| PREDICTED: probable ADP-ribosylation factor GTPase-activating protein
            AGD5-like isoform 2 [Vitis vinifera]
            gi|302143074|emb|CBI20369.3| unnamed protein product
            [Vitis vinifera]
          Length = 478

 Score =  185 bits (470), Expect(2) = 6e-46
 Identities = 127/352 (36%), Positives = 171/352 (48%), Gaps = 5/352 (1%)
 Frame = +3

Query: 3    YNDKRWIPRDGKVKPPSGVRGDKITVQNSGLGISSSIGHT-NSIEQFSEGRKAPQLHIIN 179
            Y DKRWIP+DGK +  S  R +K +      G     G+T NS   F E +      I +
Sbjct: 117  YEDKRWIPKDGKPRSTSQGREEKASAHWHRPGDRGGSGNTSNSENSFEEKKNVQAPSIKD 176

Query: 180  TKTLSNSSNPIPPKVSEQVTLDPKPXXXXXXXXXXXXXXXFGKKESNSIPVVSASEVDYA 359
                +  S P+PPK  E V   PKP                 K+ ++S PVV   +VDYA
Sbjct: 177  NGPATRISLPVPPKGPEPVAPIPKPHQVTQKPEPSVPQAESAKQAADSTPVVPPPKVDYA 236

Query: 360  TDLFNLLSTNNSIENDSKILVSDDNAADDNTRMEIQSYKATTKEEASVTPKGIETMIHSD 539
            TDLFN+LS ++  EN S+       +ADDN     QS + T+  E +   K IE    S 
Sbjct: 237  TDLFNMLSMDDPTENGSEAA-----SADDNAWAGFQSAEQTSTAEKTAPAKPIEGNTQST 291

Query: 540  SGFEDLFQGLQWVTQPISQEPPKEVKNEITNHFEKPSMESXXXXXXXXXXXXXXXXXXXX 719
            SG EDLF+    +    S +P K+VKN+I + FEK +M S                    
Sbjct: 292  SGIEDLFKDSPSIMPAASDKPQKDVKNDIMSLFEKSNMVSPFSLHQQQLAMLAQQQSLLM 351

Query: 720  VNAAKSNGVTQTRTGNIYQQNSNSIHRPAQNWGSISNQVPRRTMQVA---EQQKFRQMGN 890
              AAKS GV    + N  Q +SN    P QNW ++  Q+P   MQ A   + QKF Q  N
Sbjct: 352  AAAAKSTGVAPKFSINAQQHSSNGTDLPTQNWPNMGYQIPGMMMQAAGNNDMQKFMQAAN 411

Query: 891  ARPSHPVGNLVPYSTSSMHNSIGSALPSSR-KTSGTIRRPSTSAASPIIPTQ 1043
              P+HP GN VP++TSSM+ ++G   P++   T+   R PS S A+P  PTQ
Sbjct: 412  MGPTHPAGNSVPFATSSMY-TMGQVAPTNGVATTSVSRPPSASPATP--PTQ 460



 Score = 26.6 bits (57), Expect(2) = 6e-46
 Identities = 10/16 (62%), Positives = 13/16 (81%)
 Frame = +1

Query: 1048 GGDYDFSSLVKGLFDK 1095
            G +YDFSSL +G+F K
Sbjct: 462  GKEYDFSSLTQGMFSK 477


>ref|XP_002284562.1| PREDICTED: probable ADP-ribosylation factor GTPase-activating protein
            AGD5-like isoform 1 [Vitis vinifera]
          Length = 475

 Score =  179 bits (453), Expect(2) = 5e-44
 Identities = 128/358 (35%), Positives = 173/358 (48%), Gaps = 11/358 (3%)
 Frame = +3

Query: 3    YNDKRWIPRDGKVKPPSGVRGDKITVQNSGLGISSSIGHT-NSIEQFSEGRKAPQLHIIN 179
            Y DKRWIP+DGK +  S  R +K +      G     G+T NS   F E +      I +
Sbjct: 117  YEDKRWIPKDGKPRSTSQGREEKASAHWHRPGDRGGSGNTSNSENSFEEKKNVQAPSIKD 176

Query: 180  TKTLSNSSNPIPPKVSE------QVTLDPKPXXXXXXXXXXXXXXXFGKKESNSIPVVSA 341
                +  S P+PPK  E      QVT  P+P                 K+ ++S PVV  
Sbjct: 177  NGPATRISLPVPPKGPEPVCEPHQVTQKPEPSVPQAES---------AKQAADSTPVVPP 227

Query: 342  SEVDYATDLFNLLSTNNSIENDSKILVSDDNAADDNTRMEIQSYKATTKEEASVTPKGIE 521
             +VDYATDLFN+LS ++  EN S+       +ADDN     QS + T+  E +   K IE
Sbjct: 228  PKVDYATDLFNMLSMDDPTENGSEAA-----SADDNAWAGFQSAEQTSTAEKTAPAKPIE 282

Query: 522  TMIHSDSGFEDLFQGLQWVTQPISQEPPKEVKNEITNHFEKPSMESXXXXXXXXXXXXXX 701
                S SG EDLF+    +    S +P K+VKN+I + FEK +M S              
Sbjct: 283  GNTQSTSGIEDLFKDSPSIMPAASDKPQKDVKNDIMSLFEKSNMVSPFSLHQQQLAMLAQ 342

Query: 702  XXXXXXVNAAKSNGVTQTRTGNIYQQNSNSIHRPAQNWGSISNQVPRRTMQVA---EQQK 872
                    AAKS GV    + N  Q +SN    P QNW ++  Q+P   MQ A   + QK
Sbjct: 343  QQSLLMAAAAKSTGVAPKFSINAQQHSSNGTDLPTQNWPNMGYQIPGMMMQAAGNNDMQK 402

Query: 873  FRQMGNARPSHPVGNLVPYSTSSMHNSIGSALPSSR-KTSGTIRRPSTSAASPIIPTQ 1043
            F Q  N  P+HP GN VP++TSSM+ ++G   P++   T+   R PS S A+P  PTQ
Sbjct: 403  FMQAANMGPTHPAGNSVPFATSSMY-TMGQVAPTNGVATTSVSRPPSASPATP--PTQ 457



 Score = 26.6 bits (57), Expect(2) = 5e-44
 Identities = 10/16 (62%), Positives = 13/16 (81%)
 Frame = +1

Query: 1048 GGDYDFSSLVKGLFDK 1095
            G +YDFSSL +G+F K
Sbjct: 459  GKEYDFSSLTQGMFSK 474


>ref|XP_003635314.1| PREDICTED: probable ADP-ribosylation factor GTPase-activating protein
            AGD5-like [Vitis vinifera] gi|302144235|emb|CBI23473.3|
            unnamed protein product [Vitis vinifera]
          Length = 507

 Score =  181 bits (459), Expect = 4e-43
 Identities = 118/331 (35%), Positives = 167/331 (50%)
 Frame = +3

Query: 3    YNDKRWIPRDGKVKPPSGVRGDKITVQNSGLGISSSIGHTNSIEQFSEGRKAPQLHIINT 182
            Y +KRW+PRDGK    S     K +      G S +  +TN++E  S+ +     +  ++
Sbjct: 117  YEEKRWVPRDGKAISHSRESQQKASAYRPRPGGSGAHRYTNNVEHSSDKKNIHPPNTNSS 176

Query: 183  KTLSNSSNPIPPKVSEQVTLDPKPXXXXXXXXXXXXXXXFGKKESNSIPVVSASEVDYAT 362
               S S  P   KVS+Q T DP+P                 K+ + + P+VS   VDYAT
Sbjct: 177  IPASKSRIPAASKVSKQTTPDPQPQENVQKSESSISKAEPVKQAATATPIVSPPRVDYAT 236

Query: 363  DLFNLLSTNNSIENDSKILVSDDNAADDNTRMEIQSYKATTKEEASVTPKGIETMIHSDS 542
            DLF +LS  +S ENDS+I      +A +      QS +A++  E S     +E+ I S +
Sbjct: 237  DLFRMLSVKDSRENDSEI------SAANGVSTGFQSAEASSTVEKSTPSNPVESNIQSKT 290

Query: 543  GFEDLFQGLQWVTQPISQEPPKEVKNEITNHFEKPSMESXXXXXXXXXXXXXXXXXXXXV 722
            G EDLF+ L  VT PI ++P K++KN+I N FEK SM S                     
Sbjct: 291  GIEDLFKDLTLVTPPILEKPQKDMKNDIMNLFEKSSMVSPFSIHQQQVAMLAQQQSFLMA 350

Query: 723  NAAKSNGVTQTRTGNIYQQNSNSIHRPAQNWGSISNQVPRRTMQVAEQQKFRQMGNARPS 902
             AA+SNG + T +G+I+Q  +N +H   QNWG+I +Q P     V E QK  QMGN RP+
Sbjct: 351  AAARSNG-SHTFSGSIHQPGTNGVHLSTQNWGNIGHQRPGVLTPVTEPQKHMQMGNIRPT 409

Query: 903  HPVGNLVPYSTSSMHNSIGSALPSSRKTSGT 995
            H  G  VP  T    +S+G+  P    +SGT
Sbjct: 410  HWSGTNVPLPT----HSLGTNGPLPAHSSGT 436


>ref|XP_002330426.1| predicted protein [Populus trichocarpa] gi|222871811|gb|EEF08942.1|
            predicted protein [Populus trichocarpa]
          Length = 478

 Score =  157 bits (396), Expect(2) = 5e-38
 Identities = 120/353 (33%), Positives = 174/353 (49%), Gaps = 13/353 (3%)
 Frame = +3

Query: 3    YNDKRWIPRDGKVKPPSGVRGDKITVQNSGLGISSSIGHTNSIEQFSEGRKAPQL-HIIN 179
            Y +KRW+ +DGK + PS  R ++ ++        S  GHT+S E   E RK  Q+ +  N
Sbjct: 117  YEEKRWVSKDGKPQSPSSGRDERSSLHWQRPAERSGHGHTSSSENLFEERKNFQVSNSKN 176

Query: 180  TKTLSNSSNPIPPKVSEQVTLDPKPXXXXXXXXXXXXXXXFGKKESNSIPVVSASEVDYA 359
            +   +  S P PP+  EQV    +P                 KK +++ PVVS  +VD+A
Sbjct: 177  SAPATRISLPAPPRAFEQVVEKAEPMAEATEA---------AKKVADAAPVVSPPKVDFA 227

Query: 360  TDLFNLLSTNNSIENDSKILVSDDNAADDNTRMEIQSYKATTKEEASVT-----PKGIET 524
            TDLF+LLS +   EN S+       A DDN+    QS  A   EE S T      + +E 
Sbjct: 228  TDLFDLLSMDGPTENGSEAA-----ANDDNSWAGFQS--AAVAEEVSTTGNTGPTQAVEN 280

Query: 525  MIHSDSGFEDLFQGLQWVTQP-ISQEPPKEVKNEITNHFEKPSMESXXXXXXXXXXXXXX 701
               S SG EDLF+    +  P + ++P K+VKN+I + FEK +M S              
Sbjct: 281  DTQSVSGIEDLFKDSPSLATPSVLEKPQKDVKNDIMSLFEKSNMVSPFAMHQQQLAMLAQ 340

Query: 702  XXXXXXV---NAAKSNGVTQTRTGNIYQQNSNSIHRPAQNWGSISNQVPRRTMQVAEQ-- 866
                      +AAKS G  Q  +G+I QQ  N I  PAQNW +I  Q+P   M VA Q  
Sbjct: 341  QQLLMAAAAKSAAKSAGGDQKLSGSIQQQGPNGISIPAQNWPNIGYQIPGLMMPVAGQGD 400

Query: 867  -QKFRQMGNARPSHPVGNLVPYSTSSMHNSIGSALPSSRKTSGTIRRPSTSAA 1022
             QK +Q  +   +HP G+ VPY TSS++N I    P++  T+  + +  +S++
Sbjct: 401  LQKIKQTADMGLTHPGGSSVPYPTSSLYN-IEQVTPANGGTNNGVGKTQSSSS 452



 Score = 28.5 bits (62), Expect(2) = 5e-38
 Identities = 11/16 (68%), Positives = 14/16 (87%)
 Frame = +1

Query: 1048 GGDYDFSSLVKGLFDK 1095
            G DYDFSSL++G+F K
Sbjct: 462  GKDYDFSSLMQGMFSK 477


>ref|XP_002316931.1| predicted protein [Populus trichocarpa] gi|222859996|gb|EEE97543.1|
            predicted protein [Populus trichocarpa]
          Length = 492

 Score =  146 bits (369), Expect(2) = 8e-35
 Identities = 117/363 (32%), Positives = 175/363 (48%), Gaps = 20/363 (5%)
 Frame = +3

Query: 3    YNDKRWIPRDGKVK-PPSGVRGDKITVQNSGLGISSSIGHTNSIEQFSEGRKAPQLHII- 176
            Y +KRW+ +DG+ + PPSG+    +   +   G  S  G T+S E   E +K  Q+    
Sbjct: 117  YEEKRWVSKDGRAQSPPSGLDERSL---HQRPGERSGHGRTSSSENLFEEKKNSQVSSSR 173

Query: 177  NTKTLSNSSNPIPPKVSEQVTLDPKPXXXXXXXXXXXXXXXFGKKESNSIPVVSASEVDY 356
            N+ T +  S P+PP+  EQVT   KP                 KK +++ P VSA +VD+
Sbjct: 174  NSATATRISVPVPPRGPEQVT-PAKPQQVVEKAEPMVEATEAAKKVADAAPAVSAPKVDF 232

Query: 357  ATDLFNLLSTNNSIENDSKILVSDDNAADDNTRMEIQSYKATTKEEASVTPKGIETMIHS 536
            ATDLFNLLS +   EN S++  +DDN        +     +TT +  +V  K +E    S
Sbjct: 233  ATDLFNLLSMDGPSENGSEVASNDDNGW---AGFQFAEELSTTGK--AVPRKAVENNTQS 287

Query: 537  DSGFEDLFQGLQWVTQP-ISQEPPKEVKNEITNHFEKPSMESXXXXXXXXXXXXXXXXXX 713
            +SG EDLF+    +  P +S++P K+VKN+I + FEK +M S                  
Sbjct: 288  NSGIEDLFKDSPSLAIPSVSEKPQKDVKNDIMSLFEKSNMVSPFAMHQQQLAMLAQQQQL 347

Query: 714  XXVNAAKSNGVTQTR-------TGNIYQQNSNSIHRPAQNWGSISNQVPRRTMQVAEQQK 872
                AAKS G            +G+I QQ  N I+ PAQNW ++  Q+P   M VA Q  
Sbjct: 348  LMAAAAKSAGGDPKSVGGDLKLSGSIQQQGPNGINIPAQNWPNMGYQIPGLMMPVAGQGD 407

Query: 873  FR----------QMGNARPSHPVGNLVPYSTSSMHNSIGSALPSSRKTSGTIRRPSTSAA 1022
             +          Q+GN   +HP G+ + Y  SS  + +G   P++  TS    +  T +A
Sbjct: 408  LQKLMQVHIMELQIGNIGLTHPGGSAIQYPPSSFFD-MGQVNPANGGTSTGASK--TQSA 464

Query: 1023 SPI 1031
            +P+
Sbjct: 465  APV 467



 Score = 28.1 bits (61), Expect(2) = 8e-35
 Identities = 11/16 (68%), Positives = 13/16 (81%)
 Frame = +1

Query: 1048 GGDYDFSSLVKGLFDK 1095
            G DYDFSSL +G+F K
Sbjct: 477  GKDYDFSSLTQGMFSK 492


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