BLASTX nr result
ID: Panax21_contig00025864
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00025864 (436 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002530577.1| Eukaryotic translation initiation factor 3 s... 76 3e-12 ref|XP_004156960.1| PREDICTED: LOW QUALITY PROTEIN: eukaryotic t... 75 4e-12 ref|XP_004152306.1| PREDICTED: eukaryotic translation initiation... 75 4e-12 dbj|BAJ33996.1| unnamed protein product [Thellungiella halophila] 74 9e-12 ref|XP_002887475.1| hypothetical protein ARALYDRAFT_476449 [Arab... 74 9e-12 >ref|XP_002530577.1| Eukaryotic translation initiation factor 3 subunit, putative [Ricinus communis] gi|223529876|gb|EEF31807.1| Eukaryotic translation initiation factor 3 subunit, putative [Ricinus communis] Length = 584 Score = 75.9 bits (185), Expect = 3e-12 Identities = 39/64 (60%), Positives = 45/64 (70%), Gaps = 1/64 (1%) Frame = +3 Query: 246 LVLVQPDVDKTNQNYYKETKLNYLTTDGTH-GFVPLRILF*KFWLLEMLPGKKGPVHDVR 422 LV+VQ D DKTNQ+YY E+KLNYLTTDGTH G VPLR K+GP+HDV+ Sbjct: 308 LVVVQSDFDKTNQSYYGESKLNYLTTDGTHEGLVPLR--------------KEGPIHDVQ 353 Query: 423 WSYS 434 WSYS Sbjct: 354 WSYS 357 >ref|XP_004156960.1| PREDICTED: LOW QUALITY PROTEIN: eukaryotic translation initiation factor 2A-like [Cucumis sativus] Length = 519 Score = 75.5 bits (184), Expect = 4e-12 Identities = 42/71 (59%), Positives = 47/71 (66%), Gaps = 3/71 (4%) Frame = +3 Query: 231 NNGP--YLVLVQPDVDKTNQNYYKETKLNYLTTDGTH-GFVPLRILF*KFWLLEMLPGKK 401 NNG L++VQ DVDKTNQ+YY ETKLNYLTTDG H G VPLR K+ Sbjct: 229 NNGSTGLLIVVQADVDKTNQSYYGETKLNYLTTDGVHEGLVPLR--------------KE 274 Query: 402 GPVHDVRWSYS 434 GPVHDV+WS S Sbjct: 275 GPVHDVQWSQS 285 >ref|XP_004152306.1| PREDICTED: eukaryotic translation initiation factor 2A-like [Cucumis sativus] Length = 485 Score = 75.5 bits (184), Expect = 4e-12 Identities = 42/71 (59%), Positives = 47/71 (66%), Gaps = 3/71 (4%) Frame = +3 Query: 231 NNGP--YLVLVQPDVDKTNQNYYKETKLNYLTTDGTH-GFVPLRILF*KFWLLEMLPGKK 401 NNG L++VQ DVDKTNQ+YY ETKLNYLTTDG H G VPLR K+ Sbjct: 229 NNGSTGLLIVVQADVDKTNQSYYGETKLNYLTTDGVHEGLVPLR--------------KE 274 Query: 402 GPVHDVRWSYS 434 GPVHDV+WS S Sbjct: 275 GPVHDVQWSQS 285 >dbj|BAJ33996.1| unnamed protein product [Thellungiella halophila] Length = 513 Score = 74.3 bits (181), Expect = 9e-12 Identities = 39/64 (60%), Positives = 45/64 (70%), Gaps = 1/64 (1%) Frame = +3 Query: 246 LVLVQPDVDKTNQNYYKETKLNYLTTDGTH-GFVPLRILF*KFWLLEMLPGKKGPVHDVR 422 LV+VQ DVDKTNQ+YY ETKL+YLT DGTH G VPLR K+GPVHDV+ Sbjct: 234 LVVVQSDVDKTNQSYYGETKLHYLTVDGTHEGLVPLR--------------KEGPVHDVQ 279 Query: 423 WSYS 434 WS+S Sbjct: 280 WSFS 283 >ref|XP_002887475.1| hypothetical protein ARALYDRAFT_476449 [Arabidopsis lyrata subsp. lyrata] gi|297333316|gb|EFH63734.1| hypothetical protein ARALYDRAFT_476449 [Arabidopsis lyrata subsp. lyrata] Length = 511 Score = 74.3 bits (181), Expect = 9e-12 Identities = 39/64 (60%), Positives = 45/64 (70%), Gaps = 1/64 (1%) Frame = +3 Query: 246 LVLVQPDVDKTNQNYYKETKLNYLTTDGTH-GFVPLRILF*KFWLLEMLPGKKGPVHDVR 422 LV+VQ DVDKTNQ+YY ETKL+YLT DGTH G VPL GK+GPVHDV+ Sbjct: 234 LVVVQSDVDKTNQSYYGETKLHYLTIDGTHEGLVPL--------------GKEGPVHDVQ 279 Query: 423 WSYS 434 WS+S Sbjct: 280 WSFS 283