BLASTX nr result

ID: Panax21_contig00025864 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00025864
         (436 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002530577.1| Eukaryotic translation initiation factor 3 s...    76   3e-12
ref|XP_004156960.1| PREDICTED: LOW QUALITY PROTEIN: eukaryotic t...    75   4e-12
ref|XP_004152306.1| PREDICTED: eukaryotic translation initiation...    75   4e-12
dbj|BAJ33996.1| unnamed protein product [Thellungiella halophila]      74   9e-12
ref|XP_002887475.1| hypothetical protein ARALYDRAFT_476449 [Arab...    74   9e-12

>ref|XP_002530577.1| Eukaryotic translation initiation factor 3 subunit, putative
           [Ricinus communis] gi|223529876|gb|EEF31807.1|
           Eukaryotic translation initiation factor 3 subunit,
           putative [Ricinus communis]
          Length = 584

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 39/64 (60%), Positives = 45/64 (70%), Gaps = 1/64 (1%)
 Frame = +3

Query: 246 LVLVQPDVDKTNQNYYKETKLNYLTTDGTH-GFVPLRILF*KFWLLEMLPGKKGPVHDVR 422
           LV+VQ D DKTNQ+YY E+KLNYLTTDGTH G VPLR              K+GP+HDV+
Sbjct: 308 LVVVQSDFDKTNQSYYGESKLNYLTTDGTHEGLVPLR--------------KEGPIHDVQ 353

Query: 423 WSYS 434
           WSYS
Sbjct: 354 WSYS 357


>ref|XP_004156960.1| PREDICTED: LOW QUALITY PROTEIN: eukaryotic translation initiation
           factor 2A-like [Cucumis sativus]
          Length = 519

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 42/71 (59%), Positives = 47/71 (66%), Gaps = 3/71 (4%)
 Frame = +3

Query: 231 NNGP--YLVLVQPDVDKTNQNYYKETKLNYLTTDGTH-GFVPLRILF*KFWLLEMLPGKK 401
           NNG    L++VQ DVDKTNQ+YY ETKLNYLTTDG H G VPLR              K+
Sbjct: 229 NNGSTGLLIVVQADVDKTNQSYYGETKLNYLTTDGVHEGLVPLR--------------KE 274

Query: 402 GPVHDVRWSYS 434
           GPVHDV+WS S
Sbjct: 275 GPVHDVQWSQS 285


>ref|XP_004152306.1| PREDICTED: eukaryotic translation initiation factor 2A-like
           [Cucumis sativus]
          Length = 485

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 42/71 (59%), Positives = 47/71 (66%), Gaps = 3/71 (4%)
 Frame = +3

Query: 231 NNGP--YLVLVQPDVDKTNQNYYKETKLNYLTTDGTH-GFVPLRILF*KFWLLEMLPGKK 401
           NNG    L++VQ DVDKTNQ+YY ETKLNYLTTDG H G VPLR              K+
Sbjct: 229 NNGSTGLLIVVQADVDKTNQSYYGETKLNYLTTDGVHEGLVPLR--------------KE 274

Query: 402 GPVHDVRWSYS 434
           GPVHDV+WS S
Sbjct: 275 GPVHDVQWSQS 285


>dbj|BAJ33996.1| unnamed protein product [Thellungiella halophila]
          Length = 513

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 39/64 (60%), Positives = 45/64 (70%), Gaps = 1/64 (1%)
 Frame = +3

Query: 246 LVLVQPDVDKTNQNYYKETKLNYLTTDGTH-GFVPLRILF*KFWLLEMLPGKKGPVHDVR 422
           LV+VQ DVDKTNQ+YY ETKL+YLT DGTH G VPLR              K+GPVHDV+
Sbjct: 234 LVVVQSDVDKTNQSYYGETKLHYLTVDGTHEGLVPLR--------------KEGPVHDVQ 279

Query: 423 WSYS 434
           WS+S
Sbjct: 280 WSFS 283


>ref|XP_002887475.1| hypothetical protein ARALYDRAFT_476449 [Arabidopsis lyrata subsp.
           lyrata] gi|297333316|gb|EFH63734.1| hypothetical protein
           ARALYDRAFT_476449 [Arabidopsis lyrata subsp. lyrata]
          Length = 511

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 39/64 (60%), Positives = 45/64 (70%), Gaps = 1/64 (1%)
 Frame = +3

Query: 246 LVLVQPDVDKTNQNYYKETKLNYLTTDGTH-GFVPLRILF*KFWLLEMLPGKKGPVHDVR 422
           LV+VQ DVDKTNQ+YY ETKL+YLT DGTH G VPL              GK+GPVHDV+
Sbjct: 234 LVVVQSDVDKTNQSYYGETKLHYLTIDGTHEGLVPL--------------GKEGPVHDVQ 279

Query: 423 WSYS 434
           WS+S
Sbjct: 280 WSFS 283


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