BLASTX nr result

ID: Panax21_contig00025844 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00025844
         (387 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002330418.1| predicted protein [Populus trichocarpa] gi|2...    53   5e-10
ref|XP_002525789.1| conserved hypothetical protein [Ricinus comm...    49   9e-10
ref|XP_003534675.1| PREDICTED: uncharacterized protein At5g23160...    42   8e-07

>ref|XP_002330418.1| predicted protein [Populus trichocarpa] gi|222871803|gb|EEF08934.1|
           predicted protein [Populus trichocarpa]
          Length = 291

 Score = 52.8 bits (125), Expect(2) = 5e-10
 Identities = 31/69 (44%), Positives = 38/69 (55%)
 Frame = -1

Query: 387 SRSVSQRNGSFRTNSMELKHVPIPTKKVRCGVFSSNTGXXXXXXXXXXLIFWGKVCAILC 208
           SRS+S  + SFR+NS E K      +    G  +S  G          L+ WGKVCAILC
Sbjct: 181 SRSLSDTSRSFRSNSSEFKPKQDNMQGNGKG-HTSTIGLCLVLVSLMVLVLWGKVCAILC 239

Query: 207 TSTWLFFMP 181
           TSTWLF +P
Sbjct: 240 TSTWLFLVP 248



 Score = 35.8 bits (81), Expect(2) = 5e-10
 Identities = 16/24 (66%), Positives = 20/24 (83%)
 Frame = -3

Query: 133 VDSDEYKKRIILEGLLERNRSRQL 62
           +DS EYKK II+EGLLER+R+  L
Sbjct: 268 IDSKEYKKMIIMEGLLERSRNHVL 291


>ref|XP_002525789.1| conserved hypothetical protein [Ricinus communis]
           gi|223534939|gb|EEF36625.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 280

 Score = 48.5 bits (114), Expect(2) = 9e-10
 Identities = 23/46 (50%), Positives = 27/46 (58%)
 Frame = -1

Query: 297 GVFSSNTGXXXXXXXXXXLIFWGKVCAILCTSTWLFFMPPGQSKGG 160
           G + SNTG          L+ WGKV AILCTSTWLFF+P   +  G
Sbjct: 198 GHYGSNTGLFLLLVTLTVLVLWGKVYAILCTSTWLFFVPNWSNVSG 243



 Score = 39.3 bits (90), Expect(2) = 9e-10
 Identities = 17/29 (58%), Positives = 23/29 (79%)
 Frame = -3

Query: 154 GRVGMLDVDSDEYKKRIILEGLLERNRSR 68
           GRV    +D +EYKK+II+EG L+RNR+R
Sbjct: 250 GRVHSQSMDLEEYKKKIIMEGFLDRNRNR 278


>ref|XP_003534675.1| PREDICTED: uncharacterized protein At5g23160-like [Glycine max]
          Length = 253

 Score = 42.0 bits (97), Expect(2) = 8e-07
 Identities = 15/27 (55%), Positives = 20/27 (74%)
 Frame = -1

Query: 240 IFWGKVCAILCTSTWLFFMPPGQSKGG 160
           +FWG++CAILCTS WL+  P  +  GG
Sbjct: 186 LFWGRLCAILCTSAWLYCTPRFRKSGG 212



 Score = 35.8 bits (81), Expect(2) = 8e-07
 Identities = 14/21 (66%), Positives = 20/21 (95%)
 Frame = -3

Query: 139 LDVDSDEYKKRIILEGLLERN 77
           +D+DS+EYKK++I+EGLL RN
Sbjct: 228 VDLDSEEYKKKVIMEGLLGRN 248


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