BLASTX nr result

ID: Panax21_contig00025842 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00025842
         (433 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002533724.1| conserved hypothetical protein [Ricinus comm...    64   1e-08
ref|XP_003634742.1| PREDICTED: LOW QUALITY PROTEIN: proteasome a...    63   2e-08
emb|CBI39809.3| unnamed protein product [Vitis vinifera]               63   2e-08
ref|XP_002330537.1| predicted protein [Populus trichocarpa] gi|2...    59   4e-07
ref|XP_002300583.1| predicted protein [Populus trichocarpa] gi|2...    58   7e-07

>ref|XP_002533724.1| conserved hypothetical protein [Ricinus communis]
            gi|223526362|gb|EEF28655.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 1794

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 32/52 (61%), Positives = 38/52 (73%)
 Frame = -3

Query: 332  QLSVKYNIYFAGVSRIIYXXXXXXSDGKDFAVLVSEIGSMSFKSTNLHKRYD 177
            +L VKYNI+F+GVSR I+       DG DFA LVS+IGSMSF ST LH RY+
Sbjct: 1065 ELFVKYNIHFSGVSRAIFKASDDLRDGSDFADLVSQIGSMSFDSTGLHWRYN 1116


>ref|XP_003634742.1| PREDICTED: LOW QUALITY PROTEIN: proteasome activator complex subunit
            4-like [Vitis vinifera]
          Length = 1813

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 33/52 (63%), Positives = 38/52 (73%)
 Frame = -3

Query: 332  QLSVKYNIYFAGVSRIIYXXXXXXSDGKDFAVLVSEIGSMSFKSTNLHKRYD 177
            +L VKYNI+FAGVSR I+      SDG DF  LVS+IGSMSF ST LH RY+
Sbjct: 1088 ELFVKYNIHFAGVSRSIFKTLDNHSDGPDFTNLVSQIGSMSFDSTGLHWRYN 1139


>emb|CBI39809.3| unnamed protein product [Vitis vinifera]
          Length = 1808

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 33/52 (63%), Positives = 38/52 (73%)
 Frame = -3

Query: 332  QLSVKYNIYFAGVSRIIYXXXXXXSDGKDFAVLVSEIGSMSFKSTNLHKRYD 177
            +L VKYNI+FAGVSR I+      SDG DF  LVS+IGSMSF ST LH RY+
Sbjct: 1083 ELFVKYNIHFAGVSRSIFKTLDNHSDGPDFTNLVSQIGSMSFDSTGLHWRYN 1134


>ref|XP_002330537.1| predicted protein [Populus trichocarpa] gi|222872095|gb|EEF09226.1|
           predicted protein [Populus trichocarpa]
          Length = 881

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 30/52 (57%), Positives = 36/52 (69%)
 Frame = -3

Query: 332 QLSVKYNIYFAGVSRIIYXXXXXXSDGKDFAVLVSEIGSMSFKSTNLHKRYD 177
           +L V YNIYF GVSR I+       DG +FA LVS+IGSMSF S+ LH RY+
Sbjct: 132 ELFVMYNIYFPGVSRSIFRTSDNHIDGPNFADLVSQIGSMSFDSSGLHWRYN 183


>ref|XP_002300583.1| predicted protein [Populus trichocarpa] gi|222847841|gb|EEE85388.1|
           predicted protein [Populus trichocarpa]
          Length = 269

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 30/52 (57%), Positives = 36/52 (69%)
 Frame = -3

Query: 332 QLSVKYNIYFAGVSRIIYXXXXXXSDGKDFAVLVSEIGSMSFKSTNLHKRYD 177
           +L V YNI F+GVSR I+       DG +FA LVS+IGSMSF ST LH RY+
Sbjct: 189 ELFVMYNIQFSGVSRSIFRTSDNHIDGPNFADLVSQIGSMSFDSTGLHWRYN 240


Top