BLASTX nr result

ID: Panax21_contig00025797 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00025797
         (419 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK94526.1| unknown [Populus trichocarpa]                          155   3e-36
ref|XP_004145651.1| PREDICTED: elongator complex protein 5-like ...   152   3e-35
ref|XP_002305167.1| predicted protein [Populus trichocarpa] gi|2...   148   4e-34
ref|XP_002520619.1| conserved hypothetical protein [Ricinus comm...   144   7e-33
ref|NP_001242822.1| uncharacterized protein LOC100792556 [Glycin...   141   6e-32

>gb|ABK94526.1| unknown [Populus trichocarpa]
          Length = 379

 Score =  155 bits (392), Expect = 3e-36
 Identities = 79/137 (57%), Positives = 100/137 (72%), Gaps = 1/137 (0%)
 Frame = -2

Query: 409 VFNHVLTQLSSNILAGKSQSRALVLVTLSRSPSFYAELFKSRGNDDASSHKWLRVLDCYT 230
           VF+HVL+QLSS ILA KSQSR +V+V  SRSPSFY +L KSRG D  SSHKW+++LDCYT
Sbjct: 36  VFSHVLSQLSSFILASKSQSRGIVIVAFSRSPSFYVDLLKSRGIDVNSSHKWVQILDCYT 95

Query: 229 DPFGWKDRLMECGSITNCSPSTALAAS-LCKDVRDLDKLFSSVLXXXXXXXXXXXGRFSV 53
           DP  WKD+LM  G+  + S  T+ + S +CKDV+DLDKL+S +L            RFSV
Sbjct: 96  DPLCWKDQLMGSGNFMDASHETSSSLSRVCKDVKDLDKLYSMILELGKGLVGQGKDRFSV 155

Query: 52  AIDSVSEMLRHTSMSSV 2
           AID+++EMLRHTS  +V
Sbjct: 156 AIDTINEMLRHTSTPTV 172


>ref|XP_004145651.1| PREDICTED: elongator complex protein 5-like [Cucumis sativus]
          Length = 375

 Score =  152 bits (384), Expect = 3e-35
 Identities = 73/135 (54%), Positives = 97/135 (71%)
 Frame = -2

Query: 406 FNHVLTQLSSNILAGKSQSRALVLVTLSRSPSFYAELFKSRGNDDASSHKWLRVLDCYTD 227
           F+HVLTQLSSNILAGKSQSR LVL++ SRSP++Y +L K RG D  SS KW+++LDCYTD
Sbjct: 37  FSHVLTQLSSNILAGKSQSRGLVLLSFSRSPAYYVQLLKKRGLDVGSSAKWIQILDCYTD 96

Query: 226 PFGWKDRLMECGSITNCSPSTALAASLCKDVRDLDKLFSSVLXXXXXXXXXXXGRFSVAI 47
           P GWK R ME  +++N     +  + LC +V D+DKLFSS++            RF VA+
Sbjct: 97  PLGWKQRFMEGENVSNVDQEVSNLSHLCTNVGDMDKLFSSIIALGKGFVGEGTVRFCVAV 156

Query: 46  DSVSEMLRHTSMSSV 2
           DSV+ MLRH+S+S++
Sbjct: 157 DSVTNMLRHSSISAL 171


>ref|XP_002305167.1| predicted protein [Populus trichocarpa] gi|222848131|gb|EEE85678.1|
           predicted protein [Populus trichocarpa]
          Length = 386

 Score =  148 bits (374), Expect = 4e-34
 Identities = 79/144 (54%), Positives = 100/144 (69%), Gaps = 8/144 (5%)
 Frame = -2

Query: 409 VFNHVLTQLSSNILAGKSQSRALVLVTLSRSPSFYAELFKSRGNDDASSHKWLRVLDCYT 230
           VF+HVL+QLSS ILA KSQSR +V+V  SRSPSFY +L KSRG D  SSHKW+++LDCYT
Sbjct: 36  VFSHVLSQLSSFILASKSQSRGIVIVAFSRSPSFYVDLLKSRGIDVNSSHKWVQILDCYT 95

Query: 229 DPFGWKDRLMECGSITNCSPSTALAAS-LCKDVRDLDKLFSSVL-------XXXXXXXXX 74
           DP  WKD+LM  G+  + S  T+ + S +CKDV+DLDKL+S +L                
Sbjct: 96  DPLCWKDQLMGSGNFMDASHETSSSLSRVCKDVKDLDKLYSMILELGKGKFCVNFWLVGQ 155

Query: 73  XXGRFSVAIDSVSEMLRHTSMSSV 2
              RFSVAID+++EMLRHTS  +V
Sbjct: 156 GKDRFSVAIDTINEMLRHTSTPTV 179


>ref|XP_002520619.1| conserved hypothetical protein [Ricinus communis]
           gi|223540180|gb|EEF41755.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 376

 Score =  144 bits (363), Expect = 7e-33
 Identities = 74/136 (54%), Positives = 94/136 (69%)
 Frame = -2

Query: 409 VFNHVLTQLSSNILAGKSQSRALVLVTLSRSPSFYAELFKSRGNDDASSHKWLRVLDCYT 230
           +F HVL++LSS ILA KSQ + +V++  +RSPSFY +L K R  D ASSHKW+ +LDCYT
Sbjct: 36  MFAHVLSRLSSFILAQKSQFQGIVVLAYTRSPSFYVDLLKRRKIDVASSHKWIYILDCYT 95

Query: 229 DPFGWKDRLMECGSITNCSPSTALAASLCKDVRDLDKLFSSVLXXXXXXXXXXXGRFSVA 50
           DP GWKD+L+E GS  + S   +  A LCKDV+DLD L++ +L            RFSVA
Sbjct: 96  DPLGWKDKLVEPGSRMDISHEASSVAHLCKDVKDLDSLYTLILELGKGLVGQGKARFSVA 155

Query: 49  IDSVSEMLRHTSMSSV 2
           IDSV+EMLR  SMS V
Sbjct: 156 IDSVNEMLRDASMSKV 171


>ref|NP_001242822.1| uncharacterized protein LOC100792556 [Glycine max]
           gi|255635746|gb|ACU18222.1| unknown [Glycine max]
          Length = 372

 Score =  141 bits (355), Expect = 6e-32
 Identities = 70/136 (51%), Positives = 92/136 (67%)
 Frame = -2

Query: 409 VFNHVLTQLSSNILAGKSQSRALVLVTLSRSPSFYAELFKSRGNDDASSHKWLRVLDCYT 230
           VF+H+L QLSS+++A KSQS+ +V+V LSRSPS Y  L K  G D ASS+KW+ +LDCYT
Sbjct: 36  VFSHILLQLSSHVIAQKSQSQGIVIVALSRSPSSYTSLLKMNGMDVASSNKWIHILDCYT 95

Query: 229 DPFGWKDRLMECGSITNCSPSTALAASLCKDVRDLDKLFSSVLXXXXXXXXXXXGRFSVA 50
           DP GWKD+  +  ++T+ S   +LA S  K V+D+DKLF  +             RF VA
Sbjct: 96  DPLGWKDKARKSANVTDPSQQISLATSSYKTVKDVDKLFLVIAELGRGLIGENKARFCVA 155

Query: 49  IDSVSEMLRHTSMSSV 2
           IDS+SE+LRH SM SV
Sbjct: 156 IDSLSELLRHASMQSV 171


Top