BLASTX nr result
ID: Panax21_contig00025756
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax21_contig00025756
(3568 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAN40025.1| putative gag-pol polyprotein [Zea mays] 707 0.0
gb|ABF67921.1| Ji1 putative pol protein [Zea mays] 705 0.0
gb|AAP94599.1| putative copia-type pol polyprotein [Zea mays] 705 0.0
gb|AAD20307.1| copia-type pol polyprotein [Zea mays] 702 0.0
emb|CAE04887.3| OSJNBa0042I15.9 [Oryza sativa Japonica Group] 694 0.0
>gb|AAN40025.1| putative gag-pol polyprotein [Zea mays]
Length = 1892
Score = 707 bits (1824), Expect = 0.0
Identities = 344/541 (63%), Positives = 420/541 (77%)
Frame = -2
Query: 3381 RDRTQDLIIGDPNARVKTRAATQNECFYLSFLSQIEPKKIEDAMEDSSWIEAMQEELNQF 3202
RD D I+GD + V TR+ + C + SF+S IEP ++E+A++DS W+ AMQEELN F
Sbjct: 1347 RDHPVDTILGDIHKGVTTRSRVAHFCEHYSFVSSIEPHRVEEALQDSDWVVAMQEELNNF 1406
Query: 3201 ERSKVWRLVPRPKNHPVIGTKWVFRNKMDEDGVITRNKARLVAKGYSQEEGIDYDETFAP 3022
R++VW LVPRP N V+GTKWVFRNK DE GV+TRNKARLVAKGYSQ EG+D+DET+AP
Sbjct: 1407 TRNEVWHLVPRP-NQNVVGTKWVFRNKQDEHGVVTRNKARLVAKGYSQVEGLDFDETYAP 1465
Query: 3021 VARLEAIRIFLAFAAHMKFKVFQMDVKSAFLNGELQEEVYVEQPPGFINPSLSNYVYRLD 2842
VARLE+IRI LA+A + FK++QMDVKSAFLNG ++EEVYVEQPPGF + N+VYRL
Sbjct: 1466 VARLESIRILLAYATYHGFKLYQMDVKSAFLNGPIKEEVYVEQPPGFEDSEYPNHVYRLS 1525
Query: 2841 KALYGLKQAPRAWYETLTNFLIENGFTRGRVDTTLFLRKHKDKVLLVQIYVDDIIFGSTD 2662
KALYGLKQAPRAWYE L +FLI NGF G+ D TLF + ++ + + QIYVDDIIFGST+
Sbjct: 1526 KALYGLKQAPRAWYECLRDFLIANGFKVGKADPTLFTKTLENDLFVCQIYVDDIIFGSTN 1585
Query: 2661 EKLCKRFSKLMQSKFEMSMMGELNFFLGLQVKQTDEGIFINQAKYIKDLLKKYGMESASP 2482
E C+ FS++M KFEMSMMGEL +FLG QVKQ EG FI+Q KY +D+L K+GM+ A P
Sbjct: 1586 ESTCEEFSRIMTQKFEMSMMGELKYFLGFQVKQLREGTFISQTKYTQDILAKFGMKDAKP 1645
Query: 2481 MKTPIAPATKLDKDEKGKSIDITQYRGMIGSLLYLTASRPDIMFATCICARFQANPKESH 2302
+KTP+ LD D GKS+D YR MIGSLLYL ASRPDIM + C+CARFQ++PKESH
Sbjct: 1646 IKTPMGTNGHLDLDTGGKSVDQKVYRSMIGSLLYLCASRPDIMLSVCMCARFQSDPKESH 1705
Query: 2301 LSAVKRIFRYLKGTPHLGLWYPKESSFELTGYTDADFAGCKIDRKSTSGTCQLLGNRLVS 2122
L+AVKRI RYL TP GLWYP+ S+F+L GY+DAD+AGCKI+RKSTSGTCQ LG LVS
Sbjct: 1706 LTAVKRILRYLAYTPKFGLWYPRGSTFDLIGYSDADWAGCKINRKSTSGTCQFLGRSLVS 1765
Query: 2121 WFSKKQNSVSTSTA*AEYIAAGNCCAQIL*MKNQLANYGFDFKSIPIHCDNTSAIAITHN 1942
W SKKQNSV+ STA AEYIAAG+CCAQ+L M+ L +YG+ +P+ CDN SAI + N
Sbjct: 1766 WASKKQNSVALSTAEAEYIAAGHCCAQLLWMRQTLRDYGYKLTKVPLLCDNESAIKMADN 1825
Query: 1941 PVMHSRTKHIEIRYHFIRDHVQNGTISLQYIPTENQLADVFTKPLDESKFNKLISELGML 1762
PV HSRTKHI IRYHF+RDH Q G I + YI T++QLAD+FTKPLDE F +L EL +L
Sbjct: 1826 PVEHSRTKHIAIRYHFLRDHQQKGDIEISYINTKDQLADIFTKPLDEQSFTRLRHELNIL 1885
Query: 1761 N 1759
+
Sbjct: 1886 D 1886
>gb|ABF67921.1| Ji1 putative pol protein [Zea mays]
Length = 1063
Score = 705 bits (1820), Expect = 0.0
Identities = 351/580 (60%), Positives = 431/580 (74%), Gaps = 7/580 (1%)
Frame = -2
Query: 3477 DNEPPHQEEEI---DLEDLRQEGIRTDVPTGSRWG----RDRTQDLIIGDPNARVKTRAA 3319
++EPP + D D +E P R RD D I+GD + V TR+
Sbjct: 479 EDEPPQDDSNDQGGDTNDQEKEDEEEPRPPHPRVHQAIQRDHPVDTILGDIHKGVTTRSR 538
Query: 3318 TQNECFYLSFLSQIEPKKIEDAMEDSSWIEAMQEELNQFERSKVWRLVPRPKNHPVIGTK 3139
+ C + SF+S IEP ++E+A++DS W+ AMQEELN F R++VW LVPRP N V+GTK
Sbjct: 539 VAHFCEHYSFVSSIEPHRVEEALQDSDWVVAMQEELNNFTRNEVWHLVPRP-NQNVVGTK 597
Query: 3138 WVFRNKMDEDGVITRNKARLVAKGYSQEEGIDYDETFAPVARLEAIRIFLAFAAHMKFKV 2959
WVFRNK DE GV+TRNKARLVAKGYSQ EG+D+ ET+APVARLE+IRI LA+A + FK+
Sbjct: 598 WVFRNKQDEHGVVTRNKARLVAKGYSQVEGLDFGETYAPVARLESIRILLAYATYHGFKL 657
Query: 2958 FQMDVKSAFLNGELQEEVYVEQPPGFINPSLSNYVYRLDKALYGLKQAPRAWYETLTNFL 2779
+QMDVKSAFLNG ++EEVYVEQPPGF + N+VYRL KALYGLKQAPRAWYE L +FL
Sbjct: 658 YQMDVKSAFLNGPIKEEVYVEQPPGFEDSEYPNHVYRLSKALYGLKQAPRAWYECLRDFL 717
Query: 2778 IENGFTRGRVDTTLFLRKHKDKVLLVQIYVDDIIFGSTDEKLCKRFSKLMQSKFEMSMMG 2599
I NGF G+ D TLF + ++ + + QIYVDDIIFGST+E C+ FS++M KFEMSMMG
Sbjct: 718 IANGFKVGKADPTLFTKTLENDLFVCQIYVDDIIFGSTNESTCEEFSRIMTQKFEMSMMG 777
Query: 2598 ELNFFLGLQVKQTDEGIFINQAKYIKDLLKKYGMESASPMKTPIAPATKLDKDEKGKSID 2419
EL +FLG QVKQ EG FI+Q KY +D+L K+GM+ A P+KTP+ LD D GKS+D
Sbjct: 778 ELKYFLGFQVKQLQEGTFISQTKYTQDILAKFGMKDAKPIKTPMGTNGHLDLDTGGKSVD 837
Query: 2418 ITQYRGMIGSLLYLTASRPDIMFATCICARFQANPKESHLSAVKRIFRYLKGTPHLGLWY 2239
YR MIGSLLYL ASRPDIM + C+CARFQ++PKESHL+AVKRI RYL TP GLWY
Sbjct: 838 QKVYRSMIGSLLYLCASRPDIMLSVCMCARFQSDPKESHLTAVKRILRYLAYTPKFGLWY 897
Query: 2238 PKESSFELTGYTDADFAGCKIDRKSTSGTCQLLGNRLVSWFSKKQNSVSTSTA*AEYIAA 2059
P+ S+F+L GY+DAD+AGCKI+RKSTSGTCQ LG LVSW SKKQNSV+ STA AEYIAA
Sbjct: 898 PRGSTFDLIGYSDADWAGCKINRKSTSGTCQFLGRSLVSWASKKQNSVALSTAEAEYIAA 957
Query: 2058 GNCCAQIL*MKNQLANYGFDFKSIPIHCDNTSAIAITHNPVMHSRTKHIEIRYHFIRDHV 1879
G+CCAQ+L M+ L +YG+ +P+ CDN SAI + NPV HSRTKHI IRYHF+RDH
Sbjct: 958 GHCCAQLLWMRQTLRDYGYKLTKVPLLCDNESAIKMADNPVEHSRTKHIAIRYHFLRDHQ 1017
Query: 1878 QNGTISLQYIPTENQLADVFTKPLDESKFNKLISELGMLN 1759
Q G I + YI T++QLAD+FTKPLDE F +L EL +L+
Sbjct: 1018 QKGDIEISYINTKDQLADIFTKPLDEQSFTRLRHELNILD 1057
>gb|AAP94599.1| putative copia-type pol polyprotein [Zea mays]
Length = 1760
Score = 705 bits (1819), Expect = 0.0
Identities = 353/579 (60%), Positives = 433/579 (74%), Gaps = 7/579 (1%)
Frame = -2
Query: 3474 NEPPHQEEEIDL------EDLRQEGIRTDVP-TGSRWGRDRTQDLIIGDPNARVKTRAAT 3316
NEPP Q++ ID +D E R P +D D I+GD + V TR+
Sbjct: 1178 NEPP-QDDGIDQGGDANDQDKEDEEQRPPHPRVHQAIQQDHPVDTILGDIHKGVTTRSRV 1236
Query: 3315 QNECFYLSFLSQIEPKKIEDAMEDSSWIEAMQEELNQFERSKVWRLVPRPKNHPVIGTKW 3136
+ C + SF+S IEP ++E+A++DS W+ AMQEELN F R++VW LVPRP N V+GTKW
Sbjct: 1237 AHFCEHYSFVSSIEPHRVEEALQDSDWVVAMQEELNNFTRNEVWHLVPRP-NQNVVGTKW 1295
Query: 3135 VFRNKMDEDGVITRNKARLVAKGYSQEEGIDYDETFAPVARLEAIRIFLAFAAHMKFKVF 2956
VFRNK DE GV+TRNKARLVAKGYSQ EG+D+ ET+APVARLE+IRI LA+A + FK++
Sbjct: 1296 VFRNKQDEHGVVTRNKARLVAKGYSQVEGLDFGETYAPVARLESIRILLAYATYHGFKLY 1355
Query: 2955 QMDVKSAFLNGELQEEVYVEQPPGFINPSLSNYVYRLDKALYGLKQAPRAWYETLTNFLI 2776
QMDVKSAFLNG ++EEVYVEQPPGF + N+VY+L KALYGLKQAPRAWYE L +FLI
Sbjct: 1356 QMDVKSAFLNGPIKEEVYVEQPPGFEDSEYPNHVYKLSKALYGLKQAPRAWYECLRDFLI 1415
Query: 2775 ENGFTRGRVDTTLFLRKHKDKVLLVQIYVDDIIFGSTDEKLCKRFSKLMQSKFEMSMMGE 2596
NGF G+ D TLF + ++ + + QIYVDDIIFGST+E C+ FS++M KFEMSMMGE
Sbjct: 1416 ANGFKVGKADPTLFTKTLENDLFVCQIYVDDIIFGSTNESTCEEFSRIMTQKFEMSMMGE 1475
Query: 2595 LNFFLGLQVKQTDEGIFINQAKYIKDLLKKYGMESASPMKTPIAPATKLDKDEKGKSIDI 2416
L +FLG QVKQ EG FI+Q KY +D+L K+GM+ A P+KTP+ LD D GKS+D
Sbjct: 1476 LKYFLGFQVKQLQEGTFISQTKYTQDILSKFGMKDAKPIKTPMGTNGHLDLDTGGKSVDQ 1535
Query: 2415 TQYRGMIGSLLYLTASRPDIMFATCICARFQANPKESHLSAVKRIFRYLKGTPHLGLWYP 2236
YR MIGSLLYL ASRPDIM + C+CARFQ++PKESHL+AVKRI RYL TP GLWYP
Sbjct: 1536 KVYRSMIGSLLYLCASRPDIMLSVCMCARFQSDPKESHLTAVKRILRYLAYTPKFGLWYP 1595
Query: 2235 KESSFELTGYTDADFAGCKIDRKSTSGTCQLLGNRLVSWFSKKQNSVSTSTA*AEYIAAG 2056
+ S+F+L GY+DAD+AGCKI+RKSTSGTCQ LG LVSW SKKQNSV+ STA AEYIAAG
Sbjct: 1596 RGSTFDLLGYSDADWAGCKINRKSTSGTCQFLGRSLVSWASKKQNSVALSTAEAEYIAAG 1655
Query: 2055 NCCAQIL*MKNQLANYGFDFKSIPIHCDNTSAIAITHNPVMHSRTKHIEIRYHFIRDHVQ 1876
+CCAQ+L M+ L +YG+ +P+ CDN SAI + NPV HSRTKHI IRYHF+RDH Q
Sbjct: 1656 HCCAQLLWMRQTLRDYGYKLTKVPLLCDNESAIKMADNPVEHSRTKHIAIRYHFLRDHQQ 1715
Query: 1875 NGTISLQYIPTENQLADVFTKPLDESKFNKLISELGMLN 1759
G I + YI T++QLAD+FTKPLDE F KL EL +L+
Sbjct: 1716 KGDIEISYINTKDQLADIFTKPLDEQTFTKLRHELNILD 1754
>gb|AAD20307.1| copia-type pol polyprotein [Zea mays]
Length = 1063
Score = 702 bits (1812), Expect = 0.0
Identities = 350/580 (60%), Positives = 430/580 (74%), Gaps = 7/580 (1%)
Frame = -2
Query: 3477 DNEPPHQEEEI---DLEDLRQEGIRTDVPTGSRWG----RDRTQDLIIGDPNARVKTRAA 3319
++EPP + D D +E P R RD D I+GD + V TR+
Sbjct: 479 EDEPPQDDSNDQGGDTNDQEKEDEEEPRPPHPRVHQAIQRDHPVDTILGDIHKGVTTRSR 538
Query: 3318 TQNECFYLSFLSQIEPKKIEDAMEDSSWIEAMQEELNQFERSKVWRLVPRPKNHPVIGTK 3139
+ C + SF+S IEP ++E+A++DS W+ AMQEELN F R++VW LVPRP N V+GTK
Sbjct: 539 VAHFCEHYSFVSSIEPHRVEEALQDSDWVVAMQEELNNFTRNEVWHLVPRP-NQNVVGTK 597
Query: 3138 WVFRNKMDEDGVITRNKARLVAKGYSQEEGIDYDETFAPVARLEAIRIFLAFAAHMKFKV 2959
WVFRNK DE GV+TRNKARLVAKGYSQ EG+D+ ET+APVARLE+IRI LA+A + FK+
Sbjct: 598 WVFRNKQDEHGVVTRNKARLVAKGYSQVEGLDFGETYAPVARLESIRILLAYATYHGFKL 657
Query: 2958 FQMDVKSAFLNGELQEEVYVEQPPGFINPSLSNYVYRLDKALYGLKQAPRAWYETLTNFL 2779
+QMDVKSAFLNG ++EEVYVEQPPGF + N+VYRL KALYGLKQAPRAWYE L +FL
Sbjct: 658 YQMDVKSAFLNGPIKEEVYVEQPPGFEDSEYPNHVYRLSKALYGLKQAPRAWYECLRDFL 717
Query: 2778 IENGFTRGRVDTTLFLRKHKDKVLLVQIYVDDIIFGSTDEKLCKRFSKLMQSKFEMSMMG 2599
I NGF G+ D TLF + ++ + + QIYVDDIIFGST++ C+ FS++M KFEMSMMG
Sbjct: 718 IANGFKVGKADPTLFTKTLENDLFVCQIYVDDIIFGSTNKSTCEEFSRIMTQKFEMSMMG 777
Query: 2598 ELNFFLGLQVKQTDEGIFINQAKYIKDLLKKYGMESASPMKTPIAPATKLDKDEKGKSID 2419
EL +FLG QVKQ EG FI Q KY +D+L K+GM+ A P+KTP+ LD D GKS+D
Sbjct: 778 ELKYFLGFQVKQLQEGTFICQTKYTQDILTKFGMKDAKPIKTPMGTNGHLDLDTGGKSVD 837
Query: 2418 ITQYRGMIGSLLYLTASRPDIMFATCICARFQANPKESHLSAVKRIFRYLKGTPHLGLWY 2239
YR MIGSLLYL ASRPDIM + C+CARFQ++PKESHL+AVKRI RYL TP GLWY
Sbjct: 838 QKVYRSMIGSLLYLCASRPDIMLSVCMCARFQSDPKESHLTAVKRILRYLAYTPKFGLWY 897
Query: 2238 PKESSFELTGYTDADFAGCKIDRKSTSGTCQLLGNRLVSWFSKKQNSVSTSTA*AEYIAA 2059
P+ S+F+L GY+DAD+AGCKI+RKSTSGTCQ LG LVSW SKKQNSV+ STA AEYIAA
Sbjct: 898 PRGSTFDLIGYSDADWAGCKINRKSTSGTCQFLGRSLVSWASKKQNSVALSTAEAEYIAA 957
Query: 2058 GNCCAQIL*MKNQLANYGFDFKSIPIHCDNTSAIAITHNPVMHSRTKHIEIRYHFIRDHV 1879
G+CCAQ+L M+ L +YG+ +P+ CDN SAI + NPV HSRTKHI IRYHF+RDH
Sbjct: 958 GHCCAQLLWMRQTLLDYGYKLTKVPLLCDNESAIKMADNPVEHSRTKHIAIRYHFLRDHQ 1017
Query: 1878 QNGTISLQYIPTENQLADVFTKPLDESKFNKLISELGMLN 1759
Q G I + YI T++QLAD+FTKPLDE F +L EL +L+
Sbjct: 1018 QKGDIEISYINTKDQLADIFTKPLDEQSFTRLRHELNILD 1057
>emb|CAE04887.3| OSJNBa0042I15.9 [Oryza sativa Japonica Group]
Length = 1510
Score = 694 bits (1792), Expect = 0.0
Identities = 337/541 (62%), Positives = 411/541 (75%)
Frame = -2
Query: 3381 RDRTQDLIIGDPNARVKTRAATQNECFYLSFLSQIEPKKIEDAMEDSSWIEAMQEELNQF 3202
RD D I+GD V TR+ + C + SF+S +EP ++EDA+ DS W+ AMQEELN F
Sbjct: 961 RDHPVDNILGDIRKGVTTRSRVASFCQHYSFVSSLEPTRVEDALGDSDWVMAMQEELNNF 1020
Query: 3201 ERSKVWRLVPRPKNHPVIGTKWVFRNKMDEDGVITRNKARLVAKGYSQEEGIDYDETFAP 3022
R++VW LV RPK + VIGTKW+FRNK DE V+ RNKARLV +G++Q EG+D+ ETFAP
Sbjct: 1021 ARNQVWNLVERPKQN-VIGTKWIFRNKQDEHVVVVRNKARLVTQGFTQVEGLDFGETFAP 1079
Query: 3021 VARLEAIRIFLAFAAHMKFKVFQMDVKSAFLNGELQEEVYVEQPPGFINPSLSNYVYRLD 2842
VARLE+IRI LA+AAH F++FQMDVKSAFLNG + E VYVEQPPGF +P L N+VY+L
Sbjct: 1080 VARLESIRILLAYAAHHDFRLFQMDVKSAFLNGPISELVYVEQPPGFEDPKLPNHVYKLH 1139
Query: 2841 KALYGLKQAPRAWYETLTNFLIENGFTRGRVDTTLFLRKHKDKVLLVQIYVDDIIFGSTD 2662
KALYGLKQAPRAWYE L +FL++NGF G DTTLF +K K + + QIYVDDIIFGST+
Sbjct: 1140 KALYGLKQAPRAWYECLRDFLLKNGFEIGNADTTLFTKKFKSDLFICQIYVDDIIFGSTN 1199
Query: 2661 EKLCKRFSKLMQSKFEMSMMGELNFFLGLQVKQTDEGIFINQAKYIKDLLKKYGMESASP 2482
C+ FS +M +FEMSMMGEL FFL LQVKQ EG FI+Q KY+KD+LKK+GME A P
Sbjct: 1200 ASFCEEFSSIMTKRFEMSMMGELTFFLWLQVKQAQEGTFISQTKYVKDILKKFGMEDAKP 1259
Query: 2481 MKTPIAPATKLDKDEKGKSIDITQYRGMIGSLLYLTASRPDIMFATCICARFQANPKESH 2302
+KTP+ LD D+ GK +D YR MIGSLLYL ASRPDIM + C+CARFQA PKE H
Sbjct: 1260 IKTPMPTNGHLDLDDNGKCVDQKVYRSMIGSLLYLCASRPDIMLSVCMCARFQAEPKECH 1319
Query: 2301 LSAVKRIFRYLKGTPHLGLWYPKESSFELTGYTDADFAGCKIDRKSTSGTCQLLGNRLVS 2122
L AVKRI RYL TP+LGLWYPK FEL GY+D+D+AGCK+DRKS +GTCQ LG LVS
Sbjct: 1320 LIAVKRIQRYLVHTPNLGLWYPKGCDFELLGYSDSDYAGCKVDRKSITGTCQFLGPSLVS 1379
Query: 2121 WFSKKQNSVSTSTA*AEYIAAGNCCAQIL*MKNQLANYGFDFKSIPIHCDNTSAIAITHN 1942
WF KKQNS+ ST AEY+AAG+CCAQ+L MK L ++G++F P+ CDN SAI I +N
Sbjct: 1380 WFPKKQNSIVLSTTEAEYVAAGSCCAQLLWMKQTLKDFGYNFTKTPLLCDNESAIKIANN 1439
Query: 1941 PVMHSRTKHIEIRYHFIRDHVQNGTISLQYIPTENQLADVFTKPLDESKFNKLISELGML 1762
PV HS+TKHI+I +HF+RDH G I L ++ TE QLAD+FTKPLDE +F +L SEL L
Sbjct: 1440 PVQHSKTKHIDIHHHFLRDHETKGDICLTHVRTETQLADIFTKPLDEKRFCELRSELNFL 1499
Query: 1761 N 1759
+
Sbjct: 1500 D 1500