BLASTX nr result

ID: Panax21_contig00025661 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00025661
         (1890 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002529003.1| separase, putative [Ricinus communis] gi|223...    83   2e-13
ref|XP_002273874.2| PREDICTED: uncharacterized protein LOC100259...    79   4e-12
emb|CBI23880.3| unnamed protein product [Vitis vinifera]               79   4e-12
ref|XP_002303174.1| predicted protein [Populus trichocarpa] gi|2...    70   3e-09
ref|XP_004163947.1| PREDICTED: uncharacterized LOC101203087 [Cuc...    65   6e-08

>ref|XP_002529003.1| separase, putative [Ricinus communis] gi|223531543|gb|EEF33373.1|
            separase, putative [Ricinus communis]
          Length = 2153

 Score = 83.2 bits (204), Expect = 2e-13
 Identities = 39/80 (48%), Positives = 55/80 (68%)
 Frame = -1

Query: 447  GKWLVIQSEKQKTHDIFSENISVLVRRNLFSPTCNPVTFKFMLDLIGSDILGDVLAVERA 268
            GK L I  E  + H+I  ++ SVLV RN F+ + + V+  F+LDL+G++  GDV AVERA
Sbjct: 1381 GKCLQIHGEIHEAHEIILQSASVLVSRNPFTQSYSAVSHTFLLDLVGTEYSGDVFAVERA 1440

Query: 267  TILYNLCWFILKSYHCKGTR 208
             +L+++CWF LKSYH K  R
Sbjct: 1441 ALLFDICWFSLKSYHSKDNR 1460


>ref|XP_002273874.2| PREDICTED: uncharacterized protein LOC100259948 [Vitis vinifera]
          Length = 2197

 Score = 79.0 bits (193), Expect = 4e-12
 Identities = 40/80 (50%), Positives = 54/80 (67%)
 Frame = -1

Query: 447  GKWLVIQSEKQKTHDIFSENISVLVRRNLFSPTCNPVTFKFMLDLIGSDILGDVLAVERA 268
            GK L  + E  +TH+IF ++I VL+ RN FS   + V   F+LDLIG +I GDV +VE A
Sbjct: 1424 GKCLGGRGEIHETHEIFLQSIFVLISRNPFSYGSSYVRPNFLLDLIGKEIPGDVFSVEHA 1483

Query: 267  TILYNLCWFILKSYHCKGTR 208
             I+YN+CWF LK+Y  + TR
Sbjct: 1484 AIIYNICWFSLKNYRSQDTR 1503



 Score = 40.4 bits (93), Expect(3) = 6e-06
 Identities = 19/47 (40%), Positives = 27/47 (57%), Gaps = 3/47 (6%)
 Frame = -1

Query: 1509 SKSKNVFACPDSLSQ---HSESKYFVDNSGNNVLSVCNKMKCWYCIP 1378
            S  K V A  D  SQ   H + K  + + G+ +  +CNKMKCW+C+P
Sbjct: 1345 SNGKYVPAGTDPFSQKGSHVDVKSSMADVGSEITCICNKMKCWHCLP 1391



 Score = 28.5 bits (62), Expect(3) = 6e-06
 Identities = 14/27 (51%), Positives = 15/27 (55%)
 Frame = -2

Query: 1370 GFLNNHIHMKWEFVXXXXXXXXLTDIG 1290
            G +NN I MKWEFV        LT IG
Sbjct: 1398 GLVNNFIFMKWEFVRRRLSLRLLTGIG 1424



 Score = 28.1 bits (61), Expect(3) = 6e-06
 Identities = 16/31 (51%), Positives = 21/31 (67%)
 Frame = -2

Query: 1688 TKTKYEPKMSRRTRKASKTLSQGQGLMQQHN 1596
            TK K E K SR+ +KAS+ L Q Q L+ Q+N
Sbjct: 1286 TKVKMENK-SRKAKKASQILPQEQCLISQNN 1315


>emb|CBI23880.3| unnamed protein product [Vitis vinifera]
          Length = 2158

 Score = 79.0 bits (193), Expect = 4e-12
 Identities = 40/80 (50%), Positives = 54/80 (67%)
 Frame = -1

Query: 447  GKWLVIQSEKQKTHDIFSENISVLVRRNLFSPTCNPVTFKFMLDLIGSDILGDVLAVERA 268
            GK L  + E  +TH+IF ++I VL+ RN FS   + V   F+LDLIG +I GDV +VE A
Sbjct: 1371 GKCLGGRGEIHETHEIFLQSIFVLISRNPFSYGSSYVRPNFLLDLIGKEIPGDVFSVEHA 1430

Query: 267  TILYNLCWFILKSYHCKGTR 208
             I+YN+CWF LK+Y  + TR
Sbjct: 1431 AIIYNICWFSLKNYRSQDTR 1450



 Score = 40.4 bits (93), Expect(3) = 6e-06
 Identities = 19/47 (40%), Positives = 27/47 (57%), Gaps = 3/47 (6%)
 Frame = -1

Query: 1509 SKSKNVFACPDSLSQ---HSESKYFVDNSGNNVLSVCNKMKCWYCIP 1378
            S  K V A  D  SQ   H + K  + + G+ +  +CNKMKCW+C+P
Sbjct: 1292 SNGKYVPAGTDPFSQKGSHVDVKSSMADVGSEITCICNKMKCWHCLP 1338



 Score = 28.5 bits (62), Expect(3) = 6e-06
 Identities = 14/27 (51%), Positives = 15/27 (55%)
 Frame = -2

Query: 1370 GFLNNHIHMKWEFVXXXXXXXXLTDIG 1290
            G +NN I MKWEFV        LT IG
Sbjct: 1345 GLVNNFIFMKWEFVRRRLSLRLLTGIG 1371



 Score = 28.1 bits (61), Expect(3) = 6e-06
 Identities = 16/31 (51%), Positives = 21/31 (67%)
 Frame = -2

Query: 1688 TKTKYEPKMSRRTRKASKTLSQGQGLMQQHN 1596
            TK K E K SR+ +KAS+ L Q Q L+ Q+N
Sbjct: 1233 TKVKMENK-SRKAKKASQILPQEQCLISQNN 1262


>ref|XP_002303174.1| predicted protein [Populus trichocarpa] gi|222840606|gb|EEE78153.1|
           predicted protein [Populus trichocarpa]
          Length = 506

 Score = 69.7 bits (169), Expect = 3e-09
 Identities = 36/78 (46%), Positives = 51/78 (65%)
 Frame = -1

Query: 450 AGKWLVIQSEKQKTHDIFSENISVLVRRNLFSPTCNPVTFKFMLDLIGSDILGDVLAVER 271
           +GK L IQ    +  +I S++ISVLV RN F+    P  F F+LDL+G ++ GDV ++ER
Sbjct: 425 SGKCLEIQGRFHEAREIISQSISVLVSRNPFTHARIP--FTFLLDLVGKELPGDVFSIER 482

Query: 270 ATILYNLCWFILKSYHCK 217
           A +LY++ W  LKSY  K
Sbjct: 483 AAVLYDISWCSLKSYSSK 500


>ref|XP_004163947.1| PREDICTED: uncharacterized LOC101203087 [Cucumis sativus]
          Length = 2165

 Score = 65.1 bits (157), Expect = 6e-08
 Identities = 32/80 (40%), Positives = 49/80 (61%)
 Frame = -1

Query: 447  GKWLVIQSEKQKTHDIFSENISVLVRRNLFSPTCNPVTFKFMLDLIGSDILGDVLAVERA 268
            GK   I+ +  +TH+   +++S +V RNLF      +    +L+LIG ++ GDV AVERA
Sbjct: 1401 GKISEIRGQIHQTHETILKSMSFVVSRNLFFQAHYVIEPTVLLELIGKEVHGDVFAVERA 1460

Query: 267  TILYNLCWFILKSYHCKGTR 208
            ++LY +CWF LK Y    T+
Sbjct: 1461 SVLYEICWFSLKRYKYATTK 1480


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