BLASTX nr result

ID: Panax21_contig00025620 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00025620
         (992 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277216.1| PREDICTED: uncharacterized protein LOC100257...   358   1e-96
ref|XP_002310656.1| predicted protein [Populus trichocarpa] gi|2...   348   9e-94
ref|XP_004154786.1| PREDICTED: uncharacterized protein LOC101223...   338   2e-90
ref|XP_004137181.1| PREDICTED: uncharacterized protein LOC101218...   338   2e-90
ref|XP_003626832.1| Retrograde Golgi transport protein RGP1-like...   334   2e-89

>ref|XP_002277216.1| PREDICTED: uncharacterized protein LOC100257645 [Vitis vinifera]
            gi|297737934|emb|CBI27135.3| unnamed protein product
            [Vitis vinifera]
          Length = 552

 Score =  358 bits (919), Expect = 1e-96
 Identities = 179/241 (74%), Positives = 200/241 (82%), Gaps = 1/241 (0%)
 Frame = +2

Query: 2    LSAAEVLYDSTGEVLSPRKSSAIISPSHQLKHANPLTKHDESGIPSSPGAAEPVASEGFI 181
            LS AEV+ DS+ + LS +KSSA +SPS Q K   P++  DE+G+ + PG  +P ASEGFI
Sbjct: 312  LSVAEVINDSSLDALSSQKSSANLSPSEQRKDTKPISADDEAGVSTIPGTDDPAASEGFI 371

Query: 182  RGRSYNIRLDDKVLLRFSPKNSESTYYFSDMIGGTLTFFHEEGSRRCVELSITLEMSETI 361
            RGRSYNIRLDD+VLLRFSPKNS+STYYFSDMIGGTLTFFHEEG+RRC+E+SITLE SET+
Sbjct: 372  RGRSYNIRLDDQVLLRFSPKNSDSTYYFSDMIGGTLTFFHEEGARRCLEVSITLESSETV 431

Query: 362  NXXXXXXXXXXXXTITKVQSDHHEVVADLVQTSFLFSIPMDGPMSFSTCHVSVQWALRFE 541
            N            TITKVQSDHHEVVADLVQTSFLFSIPMDGPMSFST HVSVQWALRFE
Sbjct: 432  NRRFAHPSRRNSLTITKVQSDHHEVVADLVQTSFLFSIPMDGPMSFSTPHVSVQWALRFE 491

Query: 542  FLTTPKNVDWTRYEHPLLIEGRDKCEWVLPITVHAPPQVT-SAAHIRNARSFSLEPLWVH 718
            F TTPKNVD TRYEHPLLIEGRDKCEWVLPITVHA P  T +AAH RN +SF+LEPLWV 
Sbjct: 492  FFTTPKNVDLTRYEHPLLIEGRDKCEWVLPITVHATPSGTAAAAHTRNDKSFTLEPLWVR 551

Query: 719  T 721
            +
Sbjct: 552  S 552


>ref|XP_002310656.1| predicted protein [Populus trichocarpa] gi|222853559|gb|EEE91106.1|
            predicted protein [Populus trichocarpa]
          Length = 533

 Score =  348 bits (894), Expect = 9e-94
 Identities = 175/244 (71%), Positives = 194/244 (79%), Gaps = 4/244 (1%)
 Frame = +2

Query: 2    LSAAEVLYDSTGEVLSPRKSSAIISPSHQLKHANPLTKHDESGIPSSPGAA----EPVAS 169
            LSAAEVLYDS  ++  P KSSA++ PS QL+        D +G+  +PG      EP AS
Sbjct: 297  LSAAEVLYDSGADMAEPDKSSAMVFPSQQLRD-------DMAGVSYTPGTVSVNNEPAAS 349

Query: 170  EGFIRGRSYNIRLDDKVLLRFSPKNSESTYYFSDMIGGTLTFFHEEGSRRCVELSITLEM 349
            EGFIRGRSYNIR+DD VLLRFSP+NS+STYYFSDMIGGTLTFFHEEG+++C+E+SITLE 
Sbjct: 350  EGFIRGRSYNIRMDDHVLLRFSPRNSDSTYYFSDMIGGTLTFFHEEGAKKCLEVSITLET 409

Query: 350  SETINXXXXXXXXXXXXTITKVQSDHHEVVADLVQTSFLFSIPMDGPMSFSTCHVSVQWA 529
            SET++            TITKVQSDHHEVVADLVQTSFLFSIPMDGPMSFST HVSVQW 
Sbjct: 410  SETVSRRYIHPSRKNSPTITKVQSDHHEVVADLVQTSFLFSIPMDGPMSFSTSHVSVQWV 469

Query: 530  LRFEFLTTPKNVDWTRYEHPLLIEGRDKCEWVLPITVHAPPQVTSAAHIRNARSFSLEPL 709
            LRFEF TTPKNVDWTRYEHPLLIEGRDK EWVLPITVHAPP   SAAH RN + FSLEPL
Sbjct: 470  LRFEFFTTPKNVDWTRYEHPLLIEGRDKSEWVLPITVHAPPPRASAAHSRNEKGFSLEPL 529

Query: 710  WVHT 721
            WV T
Sbjct: 530  WVRT 533


>ref|XP_004154786.1| PREDICTED: uncharacterized protein LOC101223298 [Cucumis sativus]
          Length = 427

 Score =  338 bits (866), Expect = 2e-90
 Identities = 170/242 (70%), Positives = 193/242 (79%), Gaps = 2/242 (0%)
 Frame = +2

Query: 2   LSAAEVLYDSTGEVLSPRKSSAIISPSHQLKHANPLTKHDESGIPSSPG--AAEPVASEG 175
           +S AEVLY+S  +V SP+KS A +SPS  L      +  D++G  +SP     EPVASEG
Sbjct: 187 VSVAEVLYESA-DVASPQKSFAAVSPSQVLNFEKNQSTDDDAGAATSPRPKTIEPVASEG 245

Query: 176 FIRGRSYNIRLDDKVLLRFSPKNSESTYYFSDMIGGTLTFFHEEGSRRCVELSITLEMSE 355
           FIRGRSYNIR+DD+VLLRF PKNS+STYYFSDMIGGTLTFFHEEG+RRC+ELSITLE SE
Sbjct: 246 FIRGRSYNIRVDDQVLLRFCPKNSDSTYYFSDMIGGTLTFFHEEGTRRCLELSITLETSE 305

Query: 356 TINXXXXXXXXXXXXTITKVQSDHHEVVADLVQTSFLFSIPMDGPMSFSTCHVSVQWALR 535
           T++            TI KVQSDH+EVVADL+QTSFLFSIPMDGPMSFST HVS+QWALR
Sbjct: 306 TVSRRFIHPSRRNSPTIVKVQSDHYEVVADLIQTSFLFSIPMDGPMSFSTPHVSLQWALR 365

Query: 536 FEFLTTPKNVDWTRYEHPLLIEGRDKCEWVLPITVHAPPQVTSAAHIRNARSFSLEPLWV 715
           FEF TTPKNVDWTRYEHPLLIEGR+K EWVLPITVHAPP   + A  RN R FSLEPLW+
Sbjct: 366 FEFFTTPKNVDWTRYEHPLLIEGREKSEWVLPITVHAPPSSAATAQNRNDRPFSLEPLWM 425

Query: 716 HT 721
           H+
Sbjct: 426 HS 427


>ref|XP_004137181.1| PREDICTED: uncharacterized protein LOC101218523 [Cucumis sativus]
          Length = 538

 Score =  338 bits (866), Expect = 2e-90
 Identities = 170/242 (70%), Positives = 193/242 (79%), Gaps = 2/242 (0%)
 Frame = +2

Query: 2    LSAAEVLYDSTGEVLSPRKSSAIISPSHQLKHANPLTKHDESGIPSSPG--AAEPVASEG 175
            +S AEVLY+S  +V SP+KS A +SPS  L      +  D++G  +SP     EPVASEG
Sbjct: 298  VSVAEVLYESA-DVASPQKSFAAVSPSQVLNFEKNQSTDDDAGAATSPRPKTIEPVASEG 356

Query: 176  FIRGRSYNIRLDDKVLLRFSPKNSESTYYFSDMIGGTLTFFHEEGSRRCVELSITLEMSE 355
            FIRGRSYNIR+DD+VLLRF PKNS+STYYFSDMIGGTLTFFHEEG+RRC+ELSITLE SE
Sbjct: 357  FIRGRSYNIRVDDQVLLRFCPKNSDSTYYFSDMIGGTLTFFHEEGTRRCLELSITLETSE 416

Query: 356  TINXXXXXXXXXXXXTITKVQSDHHEVVADLVQTSFLFSIPMDGPMSFSTCHVSVQWALR 535
            T++            TI KVQSDH+EVVADL+QTSFLFSIPMDGPMSFST HVS+QWALR
Sbjct: 417  TVSRRFIHPSRRNSPTIVKVQSDHYEVVADLIQTSFLFSIPMDGPMSFSTPHVSLQWALR 476

Query: 536  FEFLTTPKNVDWTRYEHPLLIEGRDKCEWVLPITVHAPPQVTSAAHIRNARSFSLEPLWV 715
            FEF TTPKNVDWTRYEHPLLIEGR+K EWVLPITVHAPP   + A  RN R FSLEPLW+
Sbjct: 477  FEFFTTPKNVDWTRYEHPLLIEGREKSEWVLPITVHAPPSSAATAQNRNDRPFSLEPLWM 536

Query: 716  HT 721
            H+
Sbjct: 537  HS 538


>ref|XP_003626832.1| Retrograde Golgi transport protein RGP1-like protein [Medicago
            truncatula] gi|355520854|gb|AET01308.1| Retrograde Golgi
            transport protein RGP1-like protein [Medicago truncatula]
          Length = 529

 Score =  334 bits (857), Expect = 2e-89
 Identities = 163/242 (67%), Positives = 191/242 (78%), Gaps = 2/242 (0%)
 Frame = +2

Query: 2    LSAAEVLYDSTGEVLSPRKSSAIISPSHQLKHANPLTKHDESGIPSSP--GAAEPVASEG 175
            LS AEVL D+  + LS +KS  ++SP+ Q K     +  D++G+ SSP  G  E ++SEG
Sbjct: 288  LSVAEVLSDTGADALSTQKSFTMVSPTEQQKFGKQFSAEDDAGVSSSPEAGPVESLSSEG 347

Query: 176  FIRGRSYNIRLDDKVLLRFSPKNSESTYYFSDMIGGTLTFFHEEGSRRCVELSITLEMSE 355
            FIRGRSYNIRLDD+VLL+FSPKNS+STYYFSDMIGGTLTFFHE+G RRC+E+S+TLE SE
Sbjct: 348  FIRGRSYNIRLDDQVLLKFSPKNSDSTYYFSDMIGGTLTFFHEQGGRRCLEISVTLETSE 407

Query: 356  TINXXXXXXXXXXXXTITKVQSDHHEVVADLVQTSFLFSIPMDGPMSFSTCHVSVQWALR 535
            TIN            TITKVQSDHHEVVADL QTSFLFS+P+DGPM+FST HVSVQW LR
Sbjct: 408  TINRRFVHPSRRNSPTITKVQSDHHEVVADLAQTSFLFSVPVDGPMTFSTPHVSVQWVLR 467

Query: 536  FEFLTTPKNVDWTRYEHPLLIEGRDKCEWVLPITVHAPPQVTSAAHIRNARSFSLEPLWV 715
            FEF TTPK VDWT+YEHPLLIEGR+K EWVLPITVHAPP  T  +  RN + FSL+P+WV
Sbjct: 468  FEFYTTPKFVDWTKYEHPLLIEGREKTEWVLPITVHAPPPRTPTSGSRNEKLFSLDPMWV 527

Query: 716  HT 721
            HT
Sbjct: 528  HT 529


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