BLASTX nr result

ID: Panax21_contig00025614 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00025614
         (787 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279088.1| PREDICTED: pentatricopeptide repeat-containi...   207   2e-51
ref|XP_004162510.1| PREDICTED: pentatricopeptide repeat-containi...   181   1e-43
ref|XP_004138834.1| PREDICTED: pentatricopeptide repeat-containi...   181   1e-43
ref|XP_003538649.1| PREDICTED: pentatricopeptide repeat-containi...   174   1e-41
ref|XP_003516753.1| PREDICTED: pentatricopeptide repeat-containi...   172   7e-41

>ref|XP_002279088.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22670,
           mitochondrial [Vitis vinifera]
          Length = 535

 Score =  207 bits (527), Expect = 2e-51
 Identities = 110/221 (49%), Positives = 146/221 (66%), Gaps = 2/221 (0%)
 Frame = +1

Query: 130 IYRGDVHPVNGMYNFLCNSFCNITVSLEVDDSTDLSESPELPNWVKFAESGIDT-TDPKD 306
           +Y+G+   +N ++    N FC  T       S   +ESPELP+WVKF+++     +D  D
Sbjct: 1   MYKGNNLLLNALHYLSLNPFCTTT------GSPTTAESPELPDWVKFSQNNNPAGSDSDD 54

Query: 307 DFVLPSVSHWVDSHKLHXXXXXXXXXXXXXXXXXXXXXSRILKDQFESTGSVVGALNGCC 486
           DFV+P +++W ++ K                       S +LK +  S  +VV AL GC 
Sbjct: 55  DFVIPKLAYWAENQKHDHRSKVDGYVLKETIDSDIDKISELLKFRHSSADAVVQALGGCG 114

Query: 487 VNVSKSLVDQVLKRFSNNWIPAFGFFKWAKMQIGYKHSPDSYNFMVDILGKSKKFDLMWE 666
           V+VS+SLV+QVLKRFSN+WIPAFGFFKWAK Q GY+HS +SYN MVDILGK KKFDLMWE
Sbjct: 115 VSVSESLVEQVLKRFSNDWIPAFGFFKWAKAQTGYRHSMNSYNSMVDILGKLKKFDLMWE 174

Query: 667 IVEEMDQLGGHITLITMAKVMRRLT-AFRHEEAIEAFRRID 786
           +VEEMD+LGG+++L TM KVMRRL  A R ++AIEAFR ++
Sbjct: 175 LVEEMDRLGGYVSLATMTKVMRRLARASRWKDAIEAFRGME 215


>ref|XP_004162510.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22670,
           mitochondrial-like [Cucumis sativus]
          Length = 614

 Score =  181 bits (460), Expect = 1e-43
 Identities = 94/194 (48%), Positives = 131/194 (67%), Gaps = 3/194 (1%)
 Frame = +1

Query: 214 VDDSTDLSESPELPNWVKFAESGIDT-TDPKDD-FVLPSVSHWVDSHKLHXXXXXXXXXX 387
           +  ST++SESP+LP+W+KF ++   T  + +DD FV+P ++HW++S KL           
Sbjct: 99  ITGSTEVSESPDLPDWIKFFDTKTSTHLESEDDVFVIPPLAHWLESQKLEDNNKVVQKKL 158

Query: 388 XXXXXXXXXXXSRILKDQFESTGSVVGALNGCCVNVSKSLVDQVLKRFSNNWIPAFGFFK 567
                      S +L++++ S  +V  ALNG    VS +LV Q+LKRF N+WI A+G FK
Sbjct: 159 GETCNNEVDKISTMLENRYPSPENVAEALNGKAYRVSNTLVAQLLKRFHNDWIQAYGIFK 218

Query: 568 WAKMQIGYKHSPDSYNFMVDILGKSKKFDLMWEIVEEMDQLGGHITLITMAKVMRRLT-A 744
           WAK QI Y+HSP+SYN MVDILGK+K F LMWE+V+EM+ L G ++L TM+KV+RRL  A
Sbjct: 219 WAKDQIPYRHSPESYNSMVDILGKAKNFRLMWELVDEMNHLAGSVSLETMSKVIRRLARA 278

Query: 745 FRHEEAIEAFRRID 786
            RH+EAI AFR I+
Sbjct: 279 GRHQEAIHAFRNIE 292


>ref|XP_004138834.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22670,
           mitochondrial-like [Cucumis sativus]
          Length = 591

 Score =  181 bits (460), Expect = 1e-43
 Identities = 94/194 (48%), Positives = 131/194 (67%), Gaps = 3/194 (1%)
 Frame = +1

Query: 214 VDDSTDLSESPELPNWVKFAESGIDT-TDPKDD-FVLPSVSHWVDSHKLHXXXXXXXXXX 387
           +  ST++SESP+LP+W+KF ++   T  + +DD FV+P ++HW++S KL           
Sbjct: 76  ITGSTEVSESPDLPDWIKFFDTKTSTHLESEDDVFVIPPLAHWLESQKLEDNNKVVQKKL 135

Query: 388 XXXXXXXXXXXSRILKDQFESTGSVVGALNGCCVNVSKSLVDQVLKRFSNNWIPAFGFFK 567
                      S +L++++ S  +V  ALNG    VS +LV Q+LKRF N+WI A+G FK
Sbjct: 136 GETCNNEVDKISTMLENRYPSPENVAEALNGKAYRVSNTLVAQLLKRFHNDWIQAYGIFK 195

Query: 568 WAKMQIGYKHSPDSYNFMVDILGKSKKFDLMWEIVEEMDQLGGHITLITMAKVMRRLT-A 744
           WAK QI Y+HSP+SYN MVDILGK+K F LMWE+V+EM+ L G ++L TM+KV+RRL  A
Sbjct: 196 WAKDQIPYRHSPESYNSMVDILGKAKNFRLMWELVDEMNHLAGSVSLETMSKVIRRLARA 255

Query: 745 FRHEEAIEAFRRID 786
            RH+EAI AFR I+
Sbjct: 256 GRHQEAIHAFRNIE 269


>ref|XP_003538649.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22670,
           mitochondrial-like [Glycine max]
          Length = 543

 Score =  174 bits (442), Expect = 1e-41
 Identities = 97/213 (45%), Positives = 129/213 (60%), Gaps = 3/213 (1%)
 Frame = +1

Query: 157 NGMYNFLCNSFCNITVSLEVDDSTDLSESPELPNWVKFAESGIDT-TDPKDDFVLPSVSH 333
           NG ++FLC                 ++ESPELP W+KF+++      D  D+FV+PS++H
Sbjct: 25  NGSHHFLCT----------------MAESPELPPWLKFSDTPTPPDADSDDNFVIPSLAH 68

Query: 334 WVDSHKLHXXXXXXXXXXXXXXXXXXXXXSRILKDQFESTGSVVGALNGCCVNVSKSLVD 513
           WVD+H L                      +++LK ++ S      AL+G     S  LV 
Sbjct: 69  WVDTHMLITKPKVLTQSPKQDNLDELDAITKVLKKRYPSPELAALALDGLSFQPSSGLVS 128

Query: 514 QVLKRFSNNWIPAFGFFKWAKMQIGYKHSPDSYNFMVDILGKSKKFDLMWEIVEEMDQL- 690
           QVL RFSN+W+PA GFFKWAK Q GY+HSP+  N MVDILGK K FD M ++VEEM +L 
Sbjct: 129 QVLNRFSNDWVPALGFFKWAKSQTGYRHSPELCNLMVDILGKCKSFDPMSDLVEEMAKLE 188

Query: 691 GGHITLITMAKVMRRLT-AFRHEEAIEAFRRID 786
            G++TL TMAKV+RRL  A +HE+AIEAFRR+D
Sbjct: 189 QGYVTLETMAKVIRRLAKARKHEDAIEAFRRMD 221


>ref|XP_003516753.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22670,
           mitochondrial-like [Glycine max]
          Length = 558

 Score =  172 bits (436), Expect = 7e-41
 Identities = 98/228 (42%), Positives = 133/228 (58%), Gaps = 7/228 (3%)
 Frame = +1

Query: 124 LKIYRGDVHP----VNGMYNFLC-NSFCNITVSLEVDDSTDLSESPELPNWVKFAESGID 288
           LK++   + P     NG + FL  N  C             ++ESPELP W+KF+++   
Sbjct: 8   LKLFTHRLSPRTAAANGSHRFLYGNPLCT------------MAESPELPPWLKFSDTPTP 55

Query: 289 T-TDPKDDFVLPSVSHWVDSHKLHXXXXXXXXXXXXXXXXXXXXXSRILKDQFESTGSVV 465
              D  D+FV+PS++HWVD+H L                      +++L+ ++ S     
Sbjct: 56  PDADSDDNFVIPSLAHWVDTHMLTTKPKVLTQSPKQDNLDELEAVTKVLQKRYPSPELAS 115

Query: 466 GALNGCCVNVSKSLVDQVLKRFSNNWIPAFGFFKWAKMQIGYKHSPDSYNFMVDILGKSK 645
            AL+G     S  LV QVL RFSN+W+PA GFFKWAK   GY+HSP+ YN MVDILGK +
Sbjct: 116 LALDGLSFQPSSGLVSQVLNRFSNDWVPALGFFKWAKSLTGYRHSPELYNLMVDILGKCR 175

Query: 646 KFDLMWEIVEEMDQLGGHITLITMAKVMRRLT-AFRHEEAIEAFRRID 786
            FD M E+VEEM +L G++TL TM KVMRRL  A +HE+AIEAF R++
Sbjct: 176 SFDSMSELVEEMARLEGYVTLETMTKVMRRLARARKHEDAIEAFGRME 223


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