BLASTX nr result

ID: Panax21_contig00025575 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00025575
         (472 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002331338.1| predicted protein [Populus trichocarpa] gi|2...    94   1e-17
ref|XP_002331746.1| predicted protein [Populus trichocarpa] gi|2...    81   8e-14
emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulga...    70   2e-10
ref|XP_003533176.1| PREDICTED: uncharacterized protein LOC100777...    68   9e-10
emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulga...    65   7e-09

>ref|XP_002331338.1| predicted protein [Populus trichocarpa] gi|222873371|gb|EEF10502.1|
            predicted protein [Populus trichocarpa]
          Length = 819

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 53/152 (34%), Positives = 81/152 (53%), Gaps = 1/152 (0%)
 Frame = +2

Query: 8    KSFQFFNFMIGLDNFHSTV*NAWDIYAPGDPLQALAGRLKSVKRALISLNK-NLGDLSSN 184
            K F+FF+  +  D F   V   WD  + G P+  L  +L+ +K+ L   N  +  ++S  
Sbjct: 620  KPFRFFDMWMDHDEFMPLVKKVWDQNSRGCPMYQLCCKLRKLKQELKLFNMAHFSNISDR 679

Query: 185  VGHTRALLHATQLAIHSDPYNPSLLERQKSLTDNLWATLFCEEQLLKQKSRIQ*LKEGDW 364
            V   +  +   Q A+H+   NP L  R++ +     +T+  EE   KQK+RIQ L  GD 
Sbjct: 680  VRDAKNKMDKAQQALHTAHENPILCMRERDVVHKYASTVRAEESFFKQKARIQWLSLGDQ 739

Query: 365  NTGFFHNQVKTRWNQNKILSITNSDGQLVTGQ 460
            NT +FH  V  R N+NK+LS+T  DG++V  Q
Sbjct: 740  NTSYFHKSVNGRQNRNKLLSLTREDGEVVERQ 771


>ref|XP_002331746.1| predicted protein [Populus trichocarpa] gi|222874272|gb|EEF11403.1|
           predicted protein [Populus trichocarpa]
          Length = 503

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 51/153 (33%), Positives = 77/153 (50%), Gaps = 1/153 (0%)
 Frame = +2

Query: 2   IPKSFQFFNFMIGLDNFHSTV*NAWDIYAPGDPLQALAGRLKSVKRALISLNK-NLGDLS 178
           I K F+FF+  +             D  + G P+  L   LK +K+ L   N  +  ++S
Sbjct: 225 IKKPFRFFDMWM-------------DQNSGGCPMYQLCCNLKKLKQELKLFNMAHFSNIS 271

Query: 179 SNVGHTRALLHATQLAIHSDPYNPSLLERQKSLTDNLWATLFCEEQLLKQKSRIQ*LKEG 358
             V   +  +   Q A+H+   NP L  R++ +     +T+  EE   KQK+RIQ L  G
Sbjct: 272 DRVKDAKNEMDKAQQALHTAHENPILCMRERDVVHKYASTVRAEESFFKQKARIQWLSLG 331

Query: 359 DWNTGFFHNQVKTRWNQNKILSITNSDGQLVTG 457
           D NT +FH  V  R N+NK+LS+T  DG++V G
Sbjct: 332 DQNTSYFHKSVNGRHNRNKLLSLTREDGEVVEG 364


>emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1114

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 55/158 (34%), Positives = 77/158 (48%), Gaps = 3/158 (1%)
 Frame = +2

Query: 8   KSFQFFNFMIGLDNFHSTV*NAWDIYAPGDPLQALAGRLKSVKRALISLN-KNLGDLSSN 184
           + F+F NF+   + F   V  AW        ++ +  RL++VKRAL S + K        
Sbjct: 243 RPFKFLNFLADQNGFVEVVKEAWGSANHRFKMKNIWVRLQAVKRALKSFHSKKFSKAHCQ 302

Query: 185 VGHTRALLHATQLAIHSDPYNPSLLERQKSLTDNL--WATLFCEEQLLKQKSRIQ*LKEG 358
           V   R  L A Q A+        L E +K L   L  W+T+  +E +LKQKSRIQ L  G
Sbjct: 303 VEELRRKLAAVQ-ALPEVSQVSELQEEEKDLIAQLRKWSTI--DESILKQKSRIQWLSLG 359

Query: 359 DWNTGFFHNQVKTRWNQNKILSITNSDGQLVTGQNETQ 472
           D N+ FF   +K R  +NKI+ + N  G  +T   E Q
Sbjct: 360 DSNSKFFFTAIKVRKARNKIVLLQNDRGDQLTENTEIQ 397


>ref|XP_003533176.1| PREDICTED: uncharacterized protein LOC100777167 [Glycine max]
          Length = 1324

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 37/141 (26%), Positives = 74/141 (52%)
 Frame = +2

Query: 50  FHSTV*NAWDIYAPGDPLQALAGRLKSVKRALISLNKNLGDLSSNVGHTRALLHATQLAI 229
           ++  V  +W     G P+  L  +LK +++ +   +K L +L  N+   R  L   Q  +
Sbjct: 461 YNDMVKASWSRPTRGSPMVRLWNKLKRLQQDMRRFSKPLSNLKQNLIKAREYLQFAQENL 520

Query: 230 HSDPYNPSLLERQKSLTDNLWATLFCEEQLLKQKSRIQ*LKEGDWNTGFFHNQVKTRWNQ 409
            ++  N   ++R + LT ++      EE++L Q++++  +++GD N  FFH  +K+R N+
Sbjct: 521 RNNNMNGHRIDRVRKLTKDVINLNEMEEKMLMQRAKVDWIRKGDGNNSFFHAIIKSRNNR 580

Query: 410 NKILSITNSDGQLVTGQNETQ 472
             I  +  +DG L+  Q+E +
Sbjct: 581 RNIYMLQKTDGTLLENQSEIE 601


>emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1110

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 50/156 (32%), Positives = 75/156 (48%), Gaps = 1/156 (0%)
 Frame = +2

Query: 8   KSFQFFNFMIGLDNFHSTV*NAWDIYAPGDPLQALAGRLKSVKRALISLN-KNLGDLSSN 184
           K F+F N M     F  TV  AW+       LQA+   LK+VKR L  +  + +G     
Sbjct: 240 KPFKFMNVMAEQGEFLETVEKAWNSVNGRFKLQAIWLNLKAVKRELKQMKTQKIGLAHEK 299

Query: 185 VGHTRALLHATQLAIHSDPYNPSLLERQKSLTDNLWATLFCEEQLLKQKSRIQ*LKEGDW 364
           V + R  L   Q     D +N  +    KS+ ++L      E+ +L+QKSRI  L++GD 
Sbjct: 300 VKNLRHQLQDLQSQDDFD-HNDIMQTDAKSIMNDLRHWSHIEDSILQQKSRITWLQQGDT 358

Query: 365 NTGFFHNQVKTRWNQNKILSITNSDGQLVTGQNETQ 472
           N+  F   VK R   N+I  +   DG+++   +E Q
Sbjct: 359 NSKLFFTAVKARHAINRIDMLNTEDGRVIQDADEVQ 394


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