BLASTX nr result

ID: Panax21_contig00025525 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00025525
         (646 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI29897.3| unnamed protein product [Vitis vinifera]               82   7e-14
ref|XP_002960083.1| hypothetical protein SELMODRAFT_229823 [Sela...    46   5e-08
ref|XP_002984052.1| hypothetical protein SELMODRAFT_119124 [Sela...    46   5e-08
ref|XP_001772045.1| predicted protein [Physcomitrella patens sub...    41   2e-07
ref|XP_002984056.1| hypothetical protein SELMODRAFT_119501 [Sela...    44   2e-07

>emb|CBI29897.3| unnamed protein product [Vitis vinifera]
          Length = 479

 Score = 82.4 bits (202), Expect = 7e-14
 Identities = 44/82 (53%), Positives = 52/82 (63%)
 Frame = -2

Query: 450 VIGLGKXXXXXXXXXXXXXXXXXXVDQNENWGTVEENIRLERQSNLKTILGHFDTEILKD 271
           VIGLGK                  +DQNEN   +E N   E+  +LKT+LGHFDT++LKD
Sbjct: 16  VIGLGKSGRAATKLALARGASVIAIDQNENLSLLELNPLFEKHGHLKTVLGHFDTKLLKD 75

Query: 270 ADTVVVSPGVPLESYGLSSLFQ 205
           AD VVVSPGVPLES+GLS L Q
Sbjct: 76  ADMVVVSPGVPLESHGLSFLLQ 97



 Score = 56.6 bits (135), Expect = 4e-06
 Identities = 28/49 (57%), Positives = 36/49 (73%)
 Frame = -1

Query: 265 HSGCFPWSSSRKLWSFLTFSVEVLPRCTKILAVSGTNGKSTVATFAGQV 119
           H   F   S +++ S L F+ E+LPR  KILAV+GTNGKSTVATF+GQ+
Sbjct: 90  HGLSFLLQSGKRVLSELDFAAEILPRSIKILAVTGTNGKSTVATFSGQM 138


>ref|XP_002960083.1| hypothetical protein SELMODRAFT_229823 [Selaginella moellendorffii]
           gi|300171022|gb|EFJ37622.1| hypothetical protein
           SELMODRAFT_229823 [Selaginella moellendorffii]
          Length = 492

 Score = 45.8 bits (107), Expect(2) = 5e-08
 Identities = 21/35 (60%), Positives = 25/35 (71%)
 Frame = -1

Query: 223 SFLTFSVEVLPRCTKILAVSGTNGKSTVATFAGQV 119
           S L F+ E  P+  KI AV+GTNGKSTV TF GQ+
Sbjct: 114 SELGFAAEAFPKAVKIAAVTGTNGKSTVTTFTGQI 148



 Score = 37.0 bits (84), Expect(2) = 5e-08
 Identities = 25/82 (30%), Positives = 34/82 (41%), Gaps = 2/82 (2%)
 Frame = -2

Query: 474 DLKGQSVAVIGLGKXXXXXXXXXXXXXXXXXXVDQNENWGTVEENIRLE--RQSNLKTIL 301
           DL G+ V V+GLG                   VD+N+    ++E+          + T L
Sbjct: 16  DLSGKRVVVVGLGSSGRAAIRLALLRGASVIAVDKNDKLAPLKEDPAFHGYEMDRVSTEL 75

Query: 300 GHFDTEILKDADTVVVSPGVPL 235
           G    E    A  +VVSPGVPL
Sbjct: 76  GPHQLETFLSASRIVVSPGVPL 97


>ref|XP_002984052.1| hypothetical protein SELMODRAFT_119124 [Selaginella moellendorffii]
           gi|300148404|gb|EFJ15064.1| hypothetical protein
           SELMODRAFT_119124 [Selaginella moellendorffii]
          Length = 492

 Score = 45.8 bits (107), Expect(2) = 5e-08
 Identities = 21/35 (60%), Positives = 25/35 (71%)
 Frame = -1

Query: 223 SFLTFSVEVLPRCTKILAVSGTNGKSTVATFAGQV 119
           S L F+ E  P+  KI AV+GTNGKSTV TF GQ+
Sbjct: 114 SELGFAAEAFPKAVKIAAVTGTNGKSTVTTFTGQI 148



 Score = 37.0 bits (84), Expect(2) = 5e-08
 Identities = 25/82 (30%), Positives = 34/82 (41%), Gaps = 2/82 (2%)
 Frame = -2

Query: 474 DLKGQSVAVIGLGKXXXXXXXXXXXXXXXXXXVDQNENWGTVEENIRLE--RQSNLKTIL 301
           DL G+ V V+GLG                   VD+N+    ++E+          + T L
Sbjct: 16  DLSGKRVVVVGLGSSGRAAIRLALLRGASVIAVDKNDKLAPLKEDPAFHGYEMDRVSTEL 75

Query: 300 GHFDTEILKDADTVVVSPGVPL 235
           G    E    A  +VVSPGVPL
Sbjct: 76  GPHQLETFLSASRIVVSPGVPL 97


>ref|XP_001772045.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|76880192|dbj|BAE45867.1|
           UDP-N-acetylmuramoylalanine-D-glutamate ligase
           [Physcomitrella patens] gi|162676646|gb|EDQ63126.1|
           predicted protein [Physcomitrella patens subsp. patens]
          Length = 521

 Score = 41.2 bits (95), Expect(2) = 2e-07
 Identities = 29/94 (30%), Positives = 45/94 (47%), Gaps = 2/94 (2%)
 Frame = -2

Query: 480 KQDLKGQSVAVIGLGKXXXXXXXXXXXXXXXXXXVDQNENWGTVEENIRLERQ--SNLKT 307
           +QDL G++VAVIGLG                   +D N +   +EE+   E    + ++T
Sbjct: 46  RQDLNGETVAVIGLGVSGRSVVKLALSRGANVLALDSNPSCVPLEEDSGFEGYDLNRVQT 105

Query: 306 ILGHFDTEILKDADTVVVSPGVPLESYGLSSLFQ 205
            LG    E L  A  +V+SPGVP+    +++  Q
Sbjct: 106 ELGPHKRETLLKASQLVLSPGVPVTHPDIAAAIQ 139



 Score = 39.7 bits (91), Expect(2) = 2e-07
 Identities = 19/36 (52%), Positives = 24/36 (66%)
 Frame = -1

Query: 226 WSFLTFSVEVLPRCTKILAVSGTNGKSTVATFAGQV 119
           +S L F+   LP   K+ AV+GTNGKSTV TF  Q+
Sbjct: 145 FSELGFAAAALPGNIKVAAVTGTNGKSTVTTFTSQI 180


>ref|XP_002984056.1| hypothetical protein SELMODRAFT_119501 [Selaginella moellendorffii]
           gi|300148408|gb|EFJ15068.1| hypothetical protein
           SELMODRAFT_119501 [Selaginella moellendorffii]
          Length = 492

 Score = 43.5 bits (101), Expect(2) = 2e-07
 Identities = 20/35 (57%), Positives = 24/35 (68%)
 Frame = -1

Query: 223 SFLTFSVEVLPRCTKILAVSGTNGKSTVATFAGQV 119
           S L  + E  P+  KI AV+GTNGKSTV TF GQ+
Sbjct: 114 SELGLAAEAFPKAVKIAAVTGTNGKSTVTTFTGQI 148



 Score = 37.0 bits (84), Expect(2) = 2e-07
 Identities = 25/82 (30%), Positives = 34/82 (41%), Gaps = 2/82 (2%)
 Frame = -2

Query: 474 DLKGQSVAVIGLGKXXXXXXXXXXXXXXXXXXVDQNENWGTVEENIRLE--RQSNLKTIL 301
           DL G+ V V+GLG                   VD+N+    ++E+          + T L
Sbjct: 16  DLSGKRVVVVGLGSSGRAAIRLALLRGASVIAVDKNDKLAPLKEDPAFHGYEMDRVSTEL 75

Query: 300 GHFDTEILKDADTVVVSPGVPL 235
           G    E    A  +VVSPGVPL
Sbjct: 76  GPHQLETFLSASRIVVSPGVPL 97


Top