BLASTX nr result

ID: Panax21_contig00025524 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00025524
         (949 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAI84657.1| hypothetical protein [Nicotiana tabacum]               64   4e-08
ref|XP_002276275.1| PREDICTED: F-box/ankyrin repeat protein SKIP...    60   6e-07
ref|XP_002533338.1| conserved hypothetical protein [Ricinus comm...    59   1e-06

>emb|CAI84657.1| hypothetical protein [Nicotiana tabacum]
          Length = 621

 Score = 64.3 bits (155), Expect = 4e-08
 Identities = 35/71 (49%), Positives = 46/71 (64%), Gaps = 4/71 (5%)
 Frame = -1

Query: 202 EKGEASNGTVVFSREGPLVNEEHPRMF----GDGCSCGAVKKLKSRLATPVSELGNTEKV 35
           E GE S+G VVFSRE PLV+++         G GC+CG V KLK+RL++   E+G  EK 
Sbjct: 37  ENGEGSHGNVVFSRESPLVSKDFRSSAIVGGGGGCNCG-VNKLKARLSSSDCEVGKNEKS 95

Query: 34  SHANKLSRQDR 2
            H  KL+RQ+R
Sbjct: 96  GHEKKLNRQER 106


>ref|XP_002276275.1| PREDICTED: F-box/ankyrin repeat protein SKIP35-like [Vitis
           vinifera]
          Length = 674

 Score = 60.5 bits (145), Expect = 6e-07
 Identities = 50/118 (42%), Positives = 61/118 (51%)
 Frame = -1

Query: 355 VSVMETNCELSLGNETMHPAEPQCXXXXXXXXXXXXXXTGSANNEIVVSTLEKGEASNGT 176
           +SV  +N  L  GN T +P +P C                S N      + E GE SN  
Sbjct: 54  ISVAGSN-NLHSGNGT-NPKDPLCAEMESNNNGIGHPKDASEN-----FSSENGEGSN-- 104

Query: 175 VVFSREGPLVNEEHPRMFGDGCSCGAVKKLKSRLATPVSELGNTEKVSHANKLSRQDR 2
           VVFSRE PLV+++  R  G GCSC   KKLKSR+    SE G  +KV +  KLSRQDR
Sbjct: 105 VVFSREAPLVSKDS-RTSG-GCSCSP-KKLKSRMVVTDSEPGKKDKVGNEKKLSRQDR 159


>ref|XP_002533338.1| conserved hypothetical protein [Ricinus communis]
           gi|223526829|gb|EEF29047.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 626

 Score = 59.3 bits (142), Expect = 1e-06
 Identities = 38/80 (47%), Positives = 50/80 (62%), Gaps = 1/80 (1%)
 Frame = -1

Query: 238 GSANNEI-VVSTLEKGEASNGTVVFSREGPLVNEEHPRMFGDGCSCGAVKKLKSRLATPV 62
           GS  +EI +++  EKGE SN  VVFSREGPL+++E  R       CGA KKLKS +    
Sbjct: 37  GSPKSEIQLLAASEKGEGSN--VVFSREGPLISKESRR--SGVYRCGA-KKLKSHMVITE 91

Query: 61  SELGNTEKVSHANKLSRQDR 2
           S++G  E   H  KL++QDR
Sbjct: 92  SDIGKKENFGHDRKLTKQDR 111


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