BLASTX nr result

ID: Panax21_contig00025520 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00025520
         (1153 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN65820.1| hypothetical protein VITISV_042324 [Vitis vinifera]    75   4e-11
ref|XP_002534383.1| conserved hypothetical protein [Ricinus comm...    73   1e-10
dbj|BAB10503.1| retroelement pol polyprotein-like [Arabidopsis t...    73   1e-10
ref|XP_004141415.1| PREDICTED: uncharacterized protein LOC101212...    71   6e-10
ref|XP_002513832.1| conserved hypothetical protein [Ricinus comm...    69   2e-09

>emb|CAN65820.1| hypothetical protein VITISV_042324 [Vitis vinifera]
          Length = 1262

 Score = 74.7 bits (182), Expect = 4e-11
 Identities = 41/111 (36%), Positives = 65/111 (58%), Gaps = 9/111 (8%)
 Frame = +2

Query: 65  VFQFLMGLSPQFSAVRGQILLMPVLPTLNEAYTLLLQEEEQRSC-----VVLPIEPSLSD 229
           V +FL+GL   +SA+R Q+LL   LP+++  ++LLLQEE QRS      + +  +  +++
Sbjct: 168 VMKFLVGLHDSYSAIRSQLLLQSPLPSMSRVFSLLLQEESQRSLTNAVGISIDSQAMVAE 227

Query: 230 STALLVK----KFGTTKGKAKLFCDYYKDTGHSRDKCFILNGYPAWFKGPQ 370
            ++  V     +F   KGK+   C +   +GH  DKCF L GYP  +KGP+
Sbjct: 228 QSSRTVSTSNTQFTKQKGKSDAICSHCGYSGHLVDKCFQLIGYPPRWKGPR 278


>ref|XP_002534383.1| conserved hypothetical protein [Ricinus communis]
           gi|223525408|gb|EEF28007.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 143

 Score = 73.2 bits (178), Expect = 1e-10
 Identities = 36/103 (34%), Positives = 63/103 (61%)
 Frame = +2

Query: 53  IIMRVFQFLMGLSPQFSAVRGQILLMPVLPTLNEAYTLLLQEEEQRSCVVLPIEPSLSDS 232
           +I   F+FL G++  + A+R +I++M   PT+N+AY ++++EE+QRS +  P   +  +S
Sbjct: 30  LICNTFKFLNGVNESYQAIRSRIIIMKPFPTINQAYNMVIREEKQRSLLASP--QNFHES 87

Query: 233 TALLVKKFGTTKGKAKLFCDYYKDTGHSRDKCFILNGYPAWFK 361
            A+ VK     K  + L+C     +GH +DKC+ + G+P  FK
Sbjct: 88  AAMAVK-----KSISDLYCTQCWKSGHLKDKCYKIIGFPPDFK 125


>dbj|BAB10503.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
          Length = 1475

 Score = 73.2 bits (178), Expect = 1e-10
 Identities = 41/108 (37%), Positives = 61/108 (56%), Gaps = 8/108 (7%)
 Frame = +2

Query: 62  RVFQFLMGLSPQFSAVRGQILLMPVLPTLNEAYTLLLQEEEQRSCVVLPIEPSL------ 223
           ++ +FL GL+  +S +R QI++   +P L E Y LL Q+  QR+ V +P   S       
Sbjct: 228 KIVKFLSGLNESYSTIRSQIIMKKTIPDLAEIYNLLDQDHSQRNIVTMPTNASTFNVSAP 287

Query: 224 -SDSTAL-LVKKFGTTKGKAKLFCDYYKDTGHSRDKCFILNGYPAWFK 361
            SD  A+ L K FGT + K K+ C +   TGH+ D C+ ++GYP  FK
Sbjct: 288 QSDQFAVNLAKSFGT-QPKPKVQCSHCGYTGHNADTCYKIHGYPVGFK 334


>ref|XP_004141415.1| PREDICTED: uncharacterized protein LOC101212632 [Cucumis sativus]
           gi|449449869|ref|XP_004142687.1| PREDICTED:
           uncharacterized protein LOC101213831 [Cucumis sativus]
          Length = 440

 Score = 70.9 bits (172), Expect = 6e-10
 Identities = 45/123 (36%), Positives = 70/123 (56%), Gaps = 6/123 (4%)
 Frame = +2

Query: 65  VFQFLMGLSPQFSAVRGQILLMPVLPTLNEAYTLLLQEEEQRSCVVLPIEPSLSDSTALL 244
           V  FLMGL+  +S +R QILL+  LP +N  ++L++QEE QRS   +   PS+ +S AL+
Sbjct: 135 VMTFLMGLNESYSQIRAQILLIDPLPPINRVFSLIIQEERQRS---IGSSPSI-ESIALM 190

Query: 245 V---KKFGTTKGKAK---LFCDYYKDTGHSRDKCFILNGYPAWFKGPQFQAPSNTDNTFH 406
               ++F + K K K     C      GH+ DKC+ L+GYP   +       +N++N+ H
Sbjct: 191 ANSERRFSSDKSKKKDTRPICSNCGYKGHTADKCYKLHGYPPGHR------LANSNNSVH 244

Query: 407 KGQ 415
           + Q
Sbjct: 245 QRQ 247


>ref|XP_002513832.1| conserved hypothetical protein [Ricinus communis]
           gi|223546918|gb|EEF48415.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 183

 Score = 69.3 bits (168), Expect = 2e-09
 Identities = 37/100 (37%), Positives = 54/100 (54%)
 Frame = +2

Query: 62  RVFQFLMGLSPQFSAVRGQILLMPVLPTLNEAYTLLLQEEEQRSCVVLPIEPSLSDSTAL 241
           ++ QF MGL+  +   R QIL+M   PT+N AY +LL  E+QR       E   + +   
Sbjct: 49  KLMQFRMGLNDCYDHTRNQILVMDPFPTVNRAYFMLLSVEKQR-------EIHNNYNKDN 101

Query: 242 LVKKFGTTKGKAKLFCDYYKDTGHSRDKCFILNGYPAWFK 361
           + K+    K K   FCD+ +  GH RD CF ++G P W+K
Sbjct: 102 MSKRGAKKKDKENKFCDHCRTKGHERDTCFKIHGVPDWYK 141


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