BLASTX nr result
ID: Panax21_contig00025492
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax21_contig00025492
(1666 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI38567.3| unnamed protein product [Vitis vinifera] 636 e-180
ref|XP_002278113.1| PREDICTED: structural maintenance of chromos... 636 e-180
ref|XP_002510971.1| structural maintenance of chromosomes 6 smc6... 600 e-169
ref|XP_004146918.1| PREDICTED: structural maintenance of chromos... 596 e-168
ref|XP_002303494.1| predicted protein [Populus trichocarpa] gi|2... 562 e-158
>emb|CBI38567.3| unnamed protein product [Vitis vinifera]
Length = 1027
Score = 636 bits (1641), Expect = e-180
Identities = 328/447 (73%), Positives = 373/447 (83%)
Frame = +2
Query: 2 KMFSRRSAQTTLPPNRNTRTGRLCSSYDDQIKNLERDALNVQEQAQQGQGKKRNLEEARH 181
+MFSR S QT LPPN+ RTGRLCSS+D QIK+LER AL++QE Q+ + KKRN EE
Sbjct: 581 RMFSRGSVQTILPPNKKARTGRLCSSFDSQIKDLERYALDIQEHGQEVKRKKRNAEEELQ 640
Query: 182 NLQDKLQCAKRRRVDAERIFRSRKFALQDAQKSYALESSSAPASSVDELHQEISHVQNEI 361
+LQDKLQ KRRR++AER S+K LQD + SY ES+ APASSVDELH EIS VQ EI
Sbjct: 641 DLQDKLQSIKRRRLNAERDVMSKKLRLQDVKNSYVAESNPAPASSVDELHHEISKVQAEI 700
Query: 362 QEREILLEKFQVKLSEAKSKASDLKSSFENLCESAXXXXXXXXXXXXXXXXXXXDLQSAE 541
+E+EILLE FQ+++S+A +KA+DLK SFENLCESA +L SAE
Sbjct: 701 REKEILLEDFQLRMSKADAKANDLKLSFENLCESAKVEIDAYEAAENELVVIEQELCSAE 760
Query: 542 AEKSRFEVAMNERVLPKIKEVEAQYLDLEQNRKVSCKKASIICPESEIEALGGCGGSTLE 721
EK+ +E MN +VLP IKE E QY +LE NRK SC+KASIICPESEIEALGGC ST E
Sbjct: 761 TEKTHYEGIMNNKVLPDIKEAETQYQELEHNRKESCRKASIICPESEIEALGGCK-STPE 819
Query: 722 QLSAQLSRLNQRLQHESQRFPESIDDLRMMYEKKERKILRKQQTYKMFRQKLSACQKSLE 901
QLSAQL+RLNQRLQ ESQR+ E I+DLRM+Y+KKER+ILRKQQTY+ FR+KL+AC+++L+
Sbjct: 820 QLSAQLNRLNQRLQSESQRYAEPIEDLRMIYDKKERRILRKQQTYEAFREKLNACKEALD 879
Query: 902 LRWSKFQRNATLLKRQLTWQFNGHLRKKGISGHIKVSYEDETLSIEVKMPQDASNNTVRD 1081
LRWSKFQRNATLLKRQLTWQFN HLRKKGISGHIKVSYE++TLS+EVKMPQDASNN VRD
Sbjct: 880 LRWSKFQRNATLLKRQLTWQFNAHLRKKGISGHIKVSYEEKTLSVEVKMPQDASNNIVRD 939
Query: 1082 TRGLSGGERSFSTLCFALALHEMTESPFRAMDEFDVFMDAVSRKISLDTLVDFALAQGSQ 1261
TRGLSGGERSFSTLCFALALHEMTESPFRAMDEFDVFMDAVSRKISLDTLV+FALAQGSQ
Sbjct: 940 TRGLSGGERSFSTLCFALALHEMTESPFRAMDEFDVFMDAVSRKISLDTLVNFALAQGSQ 999
Query: 1262 WIFITPHDISMVKQDERIKKQQMAAPR 1342
WIFITPHDISMVKQ ERIKKQQMAAPR
Sbjct: 1000 WIFITPHDISMVKQGERIKKQQMAAPR 1026
>ref|XP_002278113.1| PREDICTED: structural maintenance of chromosomes protein 6-like
[Vitis vinifera]
Length = 1057
Score = 636 bits (1641), Expect = e-180
Identities = 328/447 (73%), Positives = 373/447 (83%)
Frame = +2
Query: 2 KMFSRRSAQTTLPPNRNTRTGRLCSSYDDQIKNLERDALNVQEQAQQGQGKKRNLEEARH 181
+MFSR S QT LPPN+ RTGRLCSS+D QIK+LER AL++QE Q+ + KKRN EE
Sbjct: 611 RMFSRGSVQTILPPNKKARTGRLCSSFDSQIKDLERYALDIQEHGQEVKRKKRNAEEELQ 670
Query: 182 NLQDKLQCAKRRRVDAERIFRSRKFALQDAQKSYALESSSAPASSVDELHQEISHVQNEI 361
+LQDKLQ KRRR++AER S+K LQD + SY ES+ APASSVDELH EIS VQ EI
Sbjct: 671 DLQDKLQSIKRRRLNAERDVMSKKLRLQDVKNSYVAESNPAPASSVDELHHEISKVQAEI 730
Query: 362 QEREILLEKFQVKLSEAKSKASDLKSSFENLCESAXXXXXXXXXXXXXXXXXXXDLQSAE 541
+E+EILLE FQ+++S+A +KA+DLK SFENLCESA +L SAE
Sbjct: 731 REKEILLEDFQLRMSKADAKANDLKLSFENLCESAKVEIDAYEAAENELVVIEQELCSAE 790
Query: 542 AEKSRFEVAMNERVLPKIKEVEAQYLDLEQNRKVSCKKASIICPESEIEALGGCGGSTLE 721
EK+ +E MN +VLP IKE E QY +LE NRK SC+KASIICPESEIEALGGC ST E
Sbjct: 791 TEKTHYEGIMNNKVLPDIKEAETQYQELEHNRKESCRKASIICPESEIEALGGCK-STPE 849
Query: 722 QLSAQLSRLNQRLQHESQRFPESIDDLRMMYEKKERKILRKQQTYKMFRQKLSACQKSLE 901
QLSAQL+RLNQRLQ ESQR+ E I+DLRM+Y+KKER+ILRKQQTY+ FR+KL+AC+++L+
Sbjct: 850 QLSAQLNRLNQRLQSESQRYAEPIEDLRMIYDKKERRILRKQQTYEAFREKLNACKEALD 909
Query: 902 LRWSKFQRNATLLKRQLTWQFNGHLRKKGISGHIKVSYEDETLSIEVKMPQDASNNTVRD 1081
LRWSKFQRNATLLKRQLTWQFN HLRKKGISGHIKVSYE++TLS+EVKMPQDASNN VRD
Sbjct: 910 LRWSKFQRNATLLKRQLTWQFNAHLRKKGISGHIKVSYEEKTLSVEVKMPQDASNNIVRD 969
Query: 1082 TRGLSGGERSFSTLCFALALHEMTESPFRAMDEFDVFMDAVSRKISLDTLVDFALAQGSQ 1261
TRGLSGGERSFSTLCFALALHEMTESPFRAMDEFDVFMDAVSRKISLDTLV+FALAQGSQ
Sbjct: 970 TRGLSGGERSFSTLCFALALHEMTESPFRAMDEFDVFMDAVSRKISLDTLVNFALAQGSQ 1029
Query: 1262 WIFITPHDISMVKQDERIKKQQMAAPR 1342
WIFITPHDISMVKQ ERIKKQQMAAPR
Sbjct: 1030 WIFITPHDISMVKQGERIKKQQMAAPR 1056
>ref|XP_002510971.1| structural maintenance of chromosomes 6 smc6, putative [Ricinus
communis] gi|223550086|gb|EEF51573.1| structural
maintenance of chromosomes 6 smc6, putative [Ricinus
communis]
Length = 1058
Score = 600 bits (1547), Expect = e-169
Identities = 307/447 (68%), Positives = 364/447 (81%)
Frame = +2
Query: 2 KMFSRRSAQTTLPPNRNTRTGRLCSSYDDQIKNLERDALNVQEQAQQGQGKKRNLEEARH 181
KMFSR S QT LPPN+ RTGRLCSSYDDQIK+LE+DA +V+++A++ + +KR+ E
Sbjct: 611 KMFSRGSVQTVLPPNKKARTGRLCSSYDDQIKDLEQDASHVRKKAEESRKRKRDSEANLQ 670
Query: 182 NLQDKLQCAKRRRVDAERIFRSRKFALQDAQKSYALESSSAPASSVDELHQEISHVQNEI 361
NLQ L+ AK R ++AER S+ A++D +KSYA ESS PA++VDELH+EIS +Q +I
Sbjct: 671 NLQRDLKNAKERCLNAERELVSKNLAVRDLKKSYATESSLVPATNVDELHEEISKIQGQI 730
Query: 362 QEREILLEKFQVKLSEAKSKASDLKSSFENLCESAXXXXXXXXXXXXXXXXXXXDLQSAE 541
QE+E LE Q + A+ KAS+LK +FE LCESA DLQSAE
Sbjct: 731 QEKEASLEMLQNSRNVAEEKASELKLAFEKLCESAKEELDAYEEAEGELMKIEKDLQSAE 790
Query: 542 AEKSRFEVAMNERVLPKIKEVEAQYLDLEQNRKVSCKKASIICPESEIEALGGCGGSTLE 721
EK+ +E M +VLP I+ EA Y +LE+NRK SC+KASIICPES+IEALGG ST E
Sbjct: 791 TEKAHYEGVMTNKVLPDIEAAEAHYQELEENRKESCRKASIICPESDIEALGGRDRSTPE 850
Query: 722 QLSAQLSRLNQRLQHESQRFPESIDDLRMMYEKKERKILRKQQTYKMFRQKLSACQKSLE 901
QLSAQL+RLNQRLQHESQR+ +SIDDLRM+YEKK+RKIL+KQQ YK FR+KL AC+++L+
Sbjct: 851 QLSAQLNRLNQRLQHESQRYSDSIDDLRMLYEKKQRKILKKQQMYKGFREKLEACKRALD 910
Query: 902 LRWSKFQRNATLLKRQLTWQFNGHLRKKGISGHIKVSYEDETLSIEVKMPQDASNNTVRD 1081
LRW+KFQRN+TLLKRQLTW FNGHL KKGISG+IKVSYE++TL +EVKMPQDAS++TVRD
Sbjct: 911 LRWNKFQRNSTLLKRQLTWNFNGHLGKKGISGNIKVSYEEKTLRVEVKMPQDASSSTVRD 970
Query: 1082 TRGLSGGERSFSTLCFALALHEMTESPFRAMDEFDVFMDAVSRKISLDTLVDFALAQGSQ 1261
TRGLSGGERSFSTLCFALALHEMTE+PFRAMDEFDVFMDAVSRKISLDTLVDFALAQGSQ
Sbjct: 971 TRGLSGGERSFSTLCFALALHEMTEAPFRAMDEFDVFMDAVSRKISLDTLVDFALAQGSQ 1030
Query: 1262 WIFITPHDISMVKQDERIKKQQMAAPR 1342
WIFITPHDISMVKQ ERIKKQQMAAPR
Sbjct: 1031 WIFITPHDISMVKQGERIKKQQMAAPR 1057
>ref|XP_004146918.1| PREDICTED: structural maintenance of chromosomes protein 6-like
[Cucumis sativus]
Length = 1052
Score = 596 bits (1536), Expect = e-168
Identities = 307/447 (68%), Positives = 363/447 (81%)
Frame = +2
Query: 2 KMFSRRSAQTTLPPNRNTRTGRLCSSYDDQIKNLERDALNVQEQAQQGQGKKRNLEEARH 181
KMFSR S QT LPP R R+GRLCSS+DDQIK+LE+DALNV+++A+Q + +KR EE
Sbjct: 605 KMFSRGSVQTILPPVRKPRSGRLCSSFDDQIKSLEKDALNVKQEAEQCRKRKRVSEEQLR 664
Query: 182 NLQDKLQCAKRRRVDAERIFRSRKFALQDAQKSYALESSSAPASSVDELHQEISHVQNEI 361
+L+D L AKRR AER S+ LQD +KS E+SS P+S+VDELHQEIS ++ EI
Sbjct: 665 DLEDNLNNAKRRCRSAERFLMSKNLELQDLRKSQVAETSSVPSSNVDELHQEISKIEEEI 724
Query: 362 QEREILLEKFQVKLSEAKSKASDLKSSFENLCESAXXXXXXXXXXXXXXXXXXXDLQSAE 541
QE ++LLEKF+V++ EA++KA DLK SFENLCESA L SAE
Sbjct: 725 QENKMLLEKFRVRMKEAEAKAKDLKVSFENLCESAKGEIDAFEEVERDMLQLERKLHSAE 784
Query: 542 AEKSRFEVAMNERVLPKIKEVEAQYLDLEQNRKVSCKKASIICPESEIEALGGCGGSTLE 721
EK +E M +VL IKE E Q+ +LE++RK S KASIICPESEIEALG GST E
Sbjct: 785 KEKDHYEGIMTNKVLFDIKEAERQHQELERHRKESYSKASIICPESEIEALGDWDGSTPE 844
Query: 722 QLSAQLSRLNQRLQHESQRFPESIDDLRMMYEKKERKILRKQQTYKMFRQKLSACQKSLE 901
QLSAQL+RLNQRL +E++R ES++DLRMMYEKKER I+RK+QTYK FR+KL ACQK+L+
Sbjct: 845 QLSAQLTRLNQRLNNETRRCSESLEDLRMMYEKKERTIIRKRQTYKSFREKLDACQKALQ 904
Query: 902 LRWSKFQRNATLLKRQLTWQFNGHLRKKGISGHIKVSYEDETLSIEVKMPQDASNNTVRD 1081
LRW+KF+RNA+LLKRQLTWQFNGHLRKKGISG+IKV+YE++TLS+EVKMPQDAS+++VRD
Sbjct: 905 LRWNKFERNASLLKRQLTWQFNGHLRKKGISGNIKVNYEEKTLSVEVKMPQDASSSSVRD 964
Query: 1082 TRGLSGGERSFSTLCFALALHEMTESPFRAMDEFDVFMDAVSRKISLDTLVDFALAQGSQ 1261
TRGLSGGERSFSTLCFALALHEMTE+PFRAMDEFDVFMDAVSRKISLDTLVDFALAQGSQ
Sbjct: 965 TRGLSGGERSFSTLCFALALHEMTEAPFRAMDEFDVFMDAVSRKISLDTLVDFALAQGSQ 1024
Query: 1262 WIFITPHDISMVKQDERIKKQQMAAPR 1342
WIFITPHDI +VKQ ERIKKQQMAAPR
Sbjct: 1025 WIFITPHDIGVVKQGERIKKQQMAAPR 1051
>ref|XP_002303494.1| predicted protein [Populus trichocarpa] gi|222840926|gb|EEE78473.1|
predicted protein [Populus trichocarpa]
Length = 1046
Score = 562 bits (1449), Expect = e-158
Identities = 293/448 (65%), Positives = 351/448 (78%), Gaps = 1/448 (0%)
Frame = +2
Query: 2 KMFSRRSAQTTLPPNRNTRTGRLCSSYDDQIKNLERDALNVQEQAQQGQGKKRNLEEARH 181
KMFSR S QT LPPN+ R GRLC S+DDQI+NL++ NVQ++A Q + +KR+ E +
Sbjct: 598 KMFSRGSVQTVLPPNKKLRAGRLCGSFDDQIRNLDQSKSNVQKEADQCRKRKRDSEASLQ 657
Query: 182 NLQDKLQCAKRRRVDAERIFRSRKFALQDAQKSYALESSS-APASSVDELHQEISHVQNE 358
+LQ L+ K + +AER S+K LQDA+ SYA +SS A AS+VDEL QEIS +Q E
Sbjct: 658 HLQHGLKIMKEKCRNAERDLVSKKLGLQDAKNSYASATSSQAAASTVDELQQEISSIQEE 717
Query: 359 IQEREILLEKFQVKLSEAKSKASDLKSSFENLCESAXXXXXXXXXXXXXXXXXXXDLQSA 538
IQE+++ LE QV+++EA SKA DL+ +FE+L ES DLQ A
Sbjct: 718 IQEKKMQLESLQVRINEADSKARDLELTFEDLRESVKEEINAIEKAESELVKIEKDLQFA 777
Query: 539 EAEKSRFEVAMNERVLPKIKEVEAQYLDLEQNRKVSCKKASIICPESEIEALGGCGGSTL 718
EAEK+R+E M RVLP I+ EAQY +LE+NRK SC+KASIICPESEIEALGGC GST
Sbjct: 778 EAEKARYEGVMTTRVLPDIEMAEAQYRELEENRKESCRKASIICPESEIEALGGCDGSTP 837
Query: 719 EQLSAQLSRLNQRLQHESQRFPESIDDLRMMYEKKERKILRKQQTYKMFRQKLSACQKSL 898
EQLS L++LNQRLQ+E Q+ +SIDDLRM Y+KKERKILRK+QTY+ FR+KL C+++L
Sbjct: 838 EQLSVHLNKLNQRLQNECQQHSDSIDDLRMFYQKKERKILRKRQTYRAFREKLKTCEEAL 897
Query: 899 ELRWSKFQRNATLLKRQLTWQFNGHLRKKGISGHIKVSYEDETLSIEVKMPQDASNNTVR 1078
LRWSKFQRNA+ LKRQLTW FNGHL +KGISG IK+SYE++TL +EVKMPQDAS ++VR
Sbjct: 898 NLRWSKFQRNASDLKRQLTWNFNGHLGEKGISGSIKISYEEKTLKVEVKMPQDASCSSVR 957
Query: 1079 DTRGLSGGERSFSTLCFALALHEMTESPFRAMDEFDVFMDAVSRKISLDTLVDFALAQGS 1258
DTRGLSGGERSFSTLCFALALH+MTE+ FRAMDEFDVFMDAVSRKISLDTLV FALAQGS
Sbjct: 958 DTRGLSGGERSFSTLCFALALHQMTEASFRAMDEFDVFMDAVSRKISLDTLVKFALAQGS 1017
Query: 1259 QWIFITPHDISMVKQDERIKKQQMAAPR 1342
QWIFITPHDIS VK ERIKKQQ+AAPR
Sbjct: 1018 QWIFITPHDISGVKHHERIKKQQLAAPR 1045