BLASTX nr result

ID: Panax21_contig00025482 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00025482
         (1601 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_173402.1| hypothetical protein NitaMp056 [Nicotiana tabac...   187   7e-45
ref|XP_004153710.1| PREDICTED: LOW QUALITY PROTEIN: NADH-ubiquin...   174   6e-41
ref|XP_002535002.1| NADH dehydrogenase, putative [Ricinus commun...   174   6e-41
ref|XP_003588292.1| NADH-ubiquinone oxidoreductase chain [Medica...   167   1e-38
ref|XP_003588285.1| NADH-ubiquinone oxidoreductase chain [Medica...   167   1e-38

>ref|YP_173402.1| hypothetical protein NitaMp056 [Nicotiana tabacum]
            gi|56806565|dbj|BAD83466.1| hypothetical protein
            (mitochondrion) [Nicotiana tabacum]
          Length = 142

 Score =  187 bits (475), Expect = 7e-45
 Identities = 97/101 (96%), Positives = 97/101 (96%)
 Frame = -2

Query: 1600 SEIVMAQKQIWFGIPLFPVLVMFFISRLAETNRAPFDLPEAEAESVAGYNVEYARDAILN 1421
            SEIVMAQKQIW GIPLFPVLVMFFISRLAETNRAPFDLPEAEAESVAGYNVEYARDAILN
Sbjct: 42   SEIVMAQKQIWSGIPLFPVLVMFFISRLAETNRAPFDLPEAEAESVAGYNVEYARDAILN 101

Query: 1420 SSLLAEANVPGSRGLILTETRGGSLPTSKSYILGKPKNVSA 1298
            SSLLAEANVPGSRGLILTETRGGSLPTSK  ILGKPK VSA
Sbjct: 102  SSLLAEANVPGSRGLILTETRGGSLPTSKYSILGKPKKVSA 142


>ref|XP_004153710.1| PREDICTED: LOW QUALITY PROTEIN: NADH-ubiquinone oxidoreductase chain
            1-like [Cucumis sativus]
          Length = 166

 Score =  174 bits (441), Expect = 6e-41
 Identities = 93/108 (86%), Positives = 95/108 (87%)
 Frame = -2

Query: 1600 SEIVMAQKQIWFGIPLFPVLVMFFISRLAETNRAPFDLPEAEAESVAGYNVEYARDAILN 1421
            SEIVMAQKQIW GIPLFPVLVMFFISRLAETNRAPFDLPEAEAESVAGYNVEYARDAILN
Sbjct: 43   SEIVMAQKQIWSGIPLFPVLVMFFISRLAETNRAPFDLPEAEAESVAGYNVEYARDAILN 102

Query: 1420 SSLLAEANVPGSRGLILTETRGGSLPTSKSYILGKPKNVSA*REPY*K 1277
            S LLAEANVPGSRGLILTETRGGSLP  +     +PK VSA  EPY K
Sbjct: 103  SPLLAEANVPGSRGLILTETRGGSLPIXRF----QPKKVSAGNEPYSK 146


>ref|XP_002535002.1| NADH dehydrogenase, putative [Ricinus communis]
            gi|255613501|ref|XP_002539515.1| NADH dehydrogenase,
            putative [Ricinus communis]
            gi|255620598|ref|XP_002540128.1| NADH dehydrogenase,
            putative [Ricinus communis] gi|223498958|gb|EEF22256.1|
            NADH dehydrogenase, putative [Ricinus communis]
            gi|223505441|gb|EEF22869.1| NADH dehydrogenase, putative
            [Ricinus communis] gi|223524216|gb|EEF27384.1| NADH
            dehydrogenase, putative [Ricinus communis]
          Length = 97

 Score =  174 bits (441), Expect = 6e-41
 Identities = 89/97 (91%), Positives = 90/97 (92%)
 Frame = -2

Query: 1588 MAQKQIWFGIPLFPVLVMFFISRLAETNRAPFDLPEAEAESVAGYNVEYARDAILNSSLL 1409
            MAQKQIW GIPLFPVLVMF IS LAETNRAPFDLPEAEAESVAGYNVEYARDAILNS LL
Sbjct: 1    MAQKQIWSGIPLFPVLVMFLISCLAETNRAPFDLPEAEAESVAGYNVEYARDAILNSPLL 60

Query: 1408 AEANVPGSRGLILTETRGGSLPTSKSYILGKPKNVSA 1298
            AEANVPGSRGLILTETRGGSLP SK + LGKPKNVSA
Sbjct: 61   AEANVPGSRGLILTETRGGSLPISKKFYLGKPKNVSA 97


>ref|XP_003588292.1| NADH-ubiquinone oxidoreductase chain [Medicago truncatula]
            gi|355477340|gb|AES58543.1| NADH-ubiquinone
            oxidoreductase chain [Medicago truncatula]
          Length = 335

 Score =  167 bits (422), Expect = 1e-38
 Identities = 85/87 (97%), Positives = 85/87 (97%)
 Frame = -2

Query: 1600 SEIVMAQKQIWFGIPLFPVLVMFFISRLAETNRAPFDLPEAEAESVAGYNVEYARDAILN 1421
            SEIVMAQKQIW GIPLFPVLVMFFISRLAETNRAPFDLPEAEAESVAGYNVEYARDAILN
Sbjct: 249  SEIVMAQKQIWSGIPLFPVLVMFFISRLAETNRAPFDLPEAEAESVAGYNVEYARDAILN 308

Query: 1420 SSLLAEANVPGSRGLILTETRGGSLPT 1340
            S LLAEANVPGSRGLILTETRGGSLPT
Sbjct: 309  SPLLAEANVPGSRGLILTETRGGSLPT 335


>ref|XP_003588285.1| NADH-ubiquinone oxidoreductase chain [Medicago truncatula]
            gi|355477333|gb|AES58536.1| NADH-ubiquinone
            oxidoreductase chain [Medicago truncatula]
          Length = 128

 Score =  167 bits (422), Expect = 1e-38
 Identities = 85/87 (97%), Positives = 85/87 (97%)
 Frame = -2

Query: 1600 SEIVMAQKQIWFGIPLFPVLVMFFISRLAETNRAPFDLPEAEAESVAGYNVEYARDAILN 1421
            SEIVMAQKQIW GIPLFPVLVMFFISRLAETNRAPFDLPEAEAESVAGYNVEYARDAILN
Sbjct: 42   SEIVMAQKQIWSGIPLFPVLVMFFISRLAETNRAPFDLPEAEAESVAGYNVEYARDAILN 101

Query: 1420 SSLLAEANVPGSRGLILTETRGGSLPT 1340
            S LLAEANVPGSRGLILTETRGGSLPT
Sbjct: 102  SPLLAEANVPGSRGLILTETRGGSLPT 128


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