BLASTX nr result

ID: Panax21_contig00025458 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00025458
         (504 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269920.2| PREDICTED: DNA polymerase epsilon catalytic ...    72   5e-11
emb|CBI17056.3| unnamed protein product [Vitis vinifera]               72   5e-11
ref|XP_002328167.1| predicted protein [Populus trichocarpa] gi|2...    71   8e-11
ref|XP_002529065.1| DNA polymerase epsilon, catalytic subunit, p...    70   2e-10
ref|XP_003540789.1| PREDICTED: DNA polymerase epsilon catalytic ...    69   5e-10

>ref|XP_002269920.2| PREDICTED: DNA polymerase epsilon catalytic subunit A [Vitis
            vinifera]
          Length = 2214

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 34/42 (80%), Positives = 38/42 (90%)
 Frame = +3

Query: 3    AGSFRCNEVVPEFRNRMQVFLKIAIQQKFQLLQECTSWILEI 128
            AGSFRC E V EF+++MQVFLKIA+ QKFQLLQECTSWILEI
Sbjct: 2172 AGSFRCKEDVSEFQSKMQVFLKIAMLQKFQLLQECTSWILEI 2213


>emb|CBI17056.3| unnamed protein product [Vitis vinifera]
          Length = 2723

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 34/42 (80%), Positives = 38/42 (90%)
 Frame = +3

Query: 3    AGSFRCNEVVPEFRNRMQVFLKIAIQQKFQLLQECTSWILEI 128
            AGSFRC E V EF+++MQVFLKIA+ QKFQLLQECTSWILEI
Sbjct: 2681 AGSFRCKEDVSEFQSKMQVFLKIAMLQKFQLLQECTSWILEI 2722


>ref|XP_002328167.1| predicted protein [Populus trichocarpa] gi|222837682|gb|EEE76047.1|
            predicted protein [Populus trichocarpa]
          Length = 2221

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 31/42 (73%), Positives = 37/42 (88%)
 Frame = +3

Query: 3    AGSFRCNEVVPEFRNRMQVFLKIAIQQKFQLLQECTSWILEI 128
            AGS+RC E V EFR +MQ+FL +AI+QKFQLLQECTSWILE+
Sbjct: 2178 AGSYRCREDVSEFRRKMQIFLNVAIRQKFQLLQECTSWILEV 2219


>ref|XP_002529065.1| DNA polymerase epsilon, catalytic subunit, putative [Ricinus
            communis] gi|223531477|gb|EEF33309.1| DNA polymerase
            epsilon, catalytic subunit, putative [Ricinus communis]
          Length = 2227

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 30/42 (71%), Positives = 37/42 (88%)
 Frame = +3

Query: 3    AGSFRCNEVVPEFRNRMQVFLKIAIQQKFQLLQECTSWILEI 128
            AG++RC E V EFR++MQ+FL +AI QKFQLLQECTSWILE+
Sbjct: 2185 AGAYRCKEDVSEFRSKMQIFLNVAISQKFQLLQECTSWILEV 2226


>ref|XP_003540789.1| PREDICTED: DNA polymerase epsilon catalytic subunit A-like [Glycine
            max]
          Length = 2207

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 31/42 (73%), Positives = 35/42 (83%)
 Frame = +3

Query: 3    AGSFRCNEVVPEFRNRMQVFLKIAIQQKFQLLQECTSWILEI 128
            AGSFRC E   EFR +MQ+FL IA +QKFQLLQECTSWILE+
Sbjct: 2165 AGSFRCKEDASEFREKMQIFLNIASRQKFQLLQECTSWILEL 2206


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