BLASTX nr result

ID: Panax21_contig00025456 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00025456
         (744 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633097.1| PREDICTED: pentatricopeptide repeat-containi...   342   5e-92
emb|CBI27939.3| unnamed protein product [Vitis vinifera]              342   5e-92
ref|XP_002330519.1| predicted protein [Populus trichocarpa] gi|2...   320   2e-85
ref|XP_004158941.1| PREDICTED: putative pentatricopeptide repeat...   300   2e-79
ref|XP_004147002.1| PREDICTED: putative pentatricopeptide repeat...   300   2e-79

>ref|XP_003633097.1| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
            [Vitis vinifera]
          Length = 1005

 Score =  342 bits (877), Expect = 5e-92
 Identities = 164/247 (66%), Positives = 200/247 (80%)
 Frame = -2

Query: 743  KALEAFKNMLDECVSPDGVTFLGILSACRHTDLVEEGKKHFYSMTEVYGLTPSIEHYACM 564
            KAL+AF+ MLDE   PD VTF+G+LSAC H  L+EEGKKHF S++++YG+TP+IEHYACM
Sbjct: 717  KALKAFEAMLDEGTVPDEVTFIGVLSACSHMGLIEEGKKHFNSLSKIYGITPTIEHYACM 776

Query: 563  VDILGRAGKLDEVESFIEQMNLTPNALIWESVLGVCKVHRNAELGERTAEKLFQMKPDID 384
            VDILGRAGK  EVESFIE+M LT N LIWE+VLG CK+H N E GER A KLF+++P+ID
Sbjct: 777  VDILGRAGKFHEVESFIEEMKLTSNVLIWETVLGACKMHGNIEFGERAAMKLFELEPEID 836

Query: 383  SNYISLSNIFAANGMWDDSSQVRALMSGRGVKKETGCSWVEVDAQIHIFRSQDASHPRIW 204
            SNYI LSN+FAA GMWDD + VRALMS RGVKKE GCSWVEV+ Q+H+F S D SHP+I 
Sbjct: 837  SNYILLSNMFAAKGMWDDVTNVRALMSTRGVKKEPGCSWVEVNGQVHVFLSHDGSHPKIR 896

Query: 203  EVYQKLEELRDKLSSVGYMPNVEDVLHNVTDR*KTDSHDNHSERLAVAFALINSIPNKTI 24
            E++ KL++L  KL SVGY PN + VLHNV+DR K +    HSERLA+AFAL+++   KTI
Sbjct: 897  EIHLKLQDLHQKLMSVGYTPNTDHVLHNVSDREKQELLFYHSERLALAFALLSTSTRKTI 956

Query: 23   RIFKNVR 3
            RIFKN+R
Sbjct: 957  RIFKNLR 963


>emb|CBI27939.3| unnamed protein product [Vitis vinifera]
          Length = 764

 Score =  342 bits (877), Expect = 5e-92
 Identities = 164/247 (66%), Positives = 200/247 (80%)
 Frame = -2

Query: 743  KALEAFKNMLDECVSPDGVTFLGILSACRHTDLVEEGKKHFYSMTEVYGLTPSIEHYACM 564
            KAL+AF+ MLDE   PD VTF+G+LSAC H  L+EEGKKHF S++++YG+TP+IEHYACM
Sbjct: 476  KALKAFEAMLDEGTVPDEVTFIGVLSACSHMGLIEEGKKHFNSLSKIYGITPTIEHYACM 535

Query: 563  VDILGRAGKLDEVESFIEQMNLTPNALIWESVLGVCKVHRNAELGERTAEKLFQMKPDID 384
            VDILGRAGK  EVESFIE+M LT N LIWE+VLG CK+H N E GER A KLF+++P+ID
Sbjct: 536  VDILGRAGKFHEVESFIEEMKLTSNVLIWETVLGACKMHGNIEFGERAAMKLFELEPEID 595

Query: 383  SNYISLSNIFAANGMWDDSSQVRALMSGRGVKKETGCSWVEVDAQIHIFRSQDASHPRIW 204
            SNYI LSN+FAA GMWDD + VRALMS RGVKKE GCSWVEV+ Q+H+F S D SHP+I 
Sbjct: 596  SNYILLSNMFAAKGMWDDVTNVRALMSTRGVKKEPGCSWVEVNGQVHVFLSHDGSHPKIR 655

Query: 203  EVYQKLEELRDKLSSVGYMPNVEDVLHNVTDR*KTDSHDNHSERLAVAFALINSIPNKTI 24
            E++ KL++L  KL SVGY PN + VLHNV+DR K +    HSERLA+AFAL+++   KTI
Sbjct: 656  EIHLKLQDLHQKLMSVGYTPNTDHVLHNVSDREKQELLFYHSERLALAFALLSTSTRKTI 715

Query: 23   RIFKNVR 3
            RIFKN+R
Sbjct: 716  RIFKNLR 722


>ref|XP_002330519.1| predicted protein [Populus trichocarpa] gi|222872453|gb|EEF09584.1|
            predicted protein [Populus trichocarpa]
          Length = 726

 Score =  320 bits (820), Expect = 2e-85
 Identities = 152/247 (61%), Positives = 195/247 (78%)
 Frame = -2

Query: 743  KALEAFKNMLDECVSPDGVTFLGILSACRHTDLVEEGKKHFYSMTEVYGLTPSIEHYACM 564
            KALEAF+ ML E + PD  TF+G+LSAC    LVEEGKK F SM+++YG+ PSIEHYACM
Sbjct: 438  KALEAFRMMLSEGIMPDEATFIGVLSACSFMGLVEEGKKRFDSMSKIYGINPSIEHYACM 497

Query: 563  VDILGRAGKLDEVESFIEQMNLTPNALIWESVLGVCKVHRNAELGERTAEKLFQMKPDID 384
            VDILGRAGK +EV+ FIE+MNLTP +LIWE+VLG CK+H N + GE+ A+KLF+M+P +D
Sbjct: 498  VDILGRAGKFNEVKIFIEEMNLTPYSLIWETVLGACKLHGNVDFGEKAAKKLFEMEPMMD 557

Query: 383  SNYISLSNIFAANGMWDDSSQVRALMSGRGVKKETGCSWVEVDAQIHIFRSQDASHPRIW 204
            S+YI LSNIFA+ G WDD   +RALM+ RG+KKE GCSWVEVD Q+H+F SQD SHP+I 
Sbjct: 558  SSYILLSNIFASKGRWDDVRNIRALMTSRGIKKEPGCSWVEVDGQVHVFLSQDGSHPKIR 617

Query: 203  EVYQKLEELRDKLSSVGYMPNVEDVLHNVTDR*KTDSHDNHSERLAVAFALINSIPNKTI 24
            E+Y KL++L   L S+GY+P  E VLHNV+++ K +    HSERLA++FAL+++   K I
Sbjct: 618  EIYAKLDKLGQSLMSIGYVPKTEVVLHNVSNKEKMEHLYYHSERLALSFALLSTNAVKPI 677

Query: 23   RIFKNVR 3
            RIFKN+R
Sbjct: 678  RIFKNLR 684


>ref|XP_004158941.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g09950-like [Cucumis sativus]
          Length = 1004

 Score =  300 bits (769), Expect = 2e-79
 Identities = 146/247 (59%), Positives = 188/247 (76%)
 Frame = -2

Query: 743  KALEAFKNMLDECVSPDGVTFLGILSACRHTDLVEEGKKHFYSMTEVYGLTPSIEHYACM 564
            KAL AF+ MLDE +SPDGVTF GILSAC H  LVEEGK+HF SM   +G++P+++H ACM
Sbjct: 701  KALTAFRMMLDEGISPDGVTFTGILSACSHQGLVEEGKEHFNSMYRDFGISPTVDHCACM 760

Query: 563  VDILGRAGKLDEVESFIEQMNLTPNALIWESVLGVCKVHRNAELGERTAEKLFQMKPDID 384
            VDILGR GK DE+E FI++M L+ NALIWE+VLG  K+H N  LGE+ A KLF+++P+ +
Sbjct: 761  VDILGRVGKFDELEDFIQKMQLSQNALIWETVLGASKMHNNLVLGEKAANKLFELQPEEE 820

Query: 383  SNYISLSNIFAANGMWDDSSQVRALMSGRGVKKETGCSWVEVDAQIHIFRSQDASHPRIW 204
            S+YI LSNIFA  G WDD  +VR+LMS +GVKKE GCSWVE + Q+H F S D SHP+I 
Sbjct: 821  SSYILLSNIFATEGRWDDVKRVRSLMSSKGVKKEPGCSWVEANGQVHTFVSHDYSHPQIQ 880

Query: 203  EVYQKLEELRDKLSSVGYMPNVEDVLHNVTDR*KTDSHDNHSERLAVAFALINSIPNKTI 24
            E++ KL+EL  +L+S+ Y+P  E VLHNV +  K ++   HSERLA+ FALI++   K I
Sbjct: 881  EIHLKLDELDRELASIQYVPKTEYVLHNVGETEKKENLRFHSERLALGFALISTSSEKKI 940

Query: 23   RIFKNVR 3
            RIFKN+R
Sbjct: 941  RIFKNLR 947


>ref|XP_004147002.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g09950-like [Cucumis sativus]
          Length = 989

 Score =  300 bits (769), Expect = 2e-79
 Identities = 146/247 (59%), Positives = 188/247 (76%)
 Frame = -2

Query: 743  KALEAFKNMLDECVSPDGVTFLGILSACRHTDLVEEGKKHFYSMTEVYGLTPSIEHYACM 564
            KAL AF+ MLDE +SPDGVTF GILSAC H  LVEEGK+HF SM   +G++P+++H ACM
Sbjct: 701  KALTAFRMMLDEGISPDGVTFTGILSACSHQGLVEEGKEHFNSMYRDFGISPTVDHCACM 760

Query: 563  VDILGRAGKLDEVESFIEQMNLTPNALIWESVLGVCKVHRNAELGERTAEKLFQMKPDID 384
            VDILGR GK DE+E FI++M L+ NALIWE+VLG  K+H N  LGE+ A KLF+++P+ +
Sbjct: 761  VDILGRVGKFDELEDFIQKMQLSQNALIWETVLGASKMHNNLVLGEKAANKLFELQPEEE 820

Query: 383  SNYISLSNIFAANGMWDDSSQVRALMSGRGVKKETGCSWVEVDAQIHIFRSQDASHPRIW 204
            S+YI LSNIFA  G WDD  +VR+LMS +GVKKE GCSWVE + Q+H F S D SHP+I 
Sbjct: 821  SSYILLSNIFATEGRWDDVKRVRSLMSSKGVKKEPGCSWVEANGQVHTFVSHDYSHPQIQ 880

Query: 203  EVYQKLEELRDKLSSVGYMPNVEDVLHNVTDR*KTDSHDNHSERLAVAFALINSIPNKTI 24
            E++ KL+EL  +L+S+ Y+P  E VLHNV +  K ++   HSERLA+ FALI++   K I
Sbjct: 881  EIHLKLDELDRELASIQYVPKTEYVLHNVGETEKKENLRFHSERLALGFALISTSSEKKI 940

Query: 23   RIFKNVR 3
            RIFKN+R
Sbjct: 941  RIFKNLR 947


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