BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00025455
         (1301 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276856.1| PREDICTED: putative tRNA pseudouridine synth...   209   2e-51
emb|CAN68579.1| hypothetical protein VITISV_034891 [Vitis vinifera]   206   1e-50
emb|CBI15850.3| unnamed protein product [Vitis vinifera]              192   1e-46
ref|XP_002517734.1| pseudouridylate synthase, putative [Ricinus ...   185   3e-44
ref|XP_003615971.1| Pseudouridylate synthase [Medicago truncatul...   184   3e-44

>ref|XP_002276856.1| PREDICTED: putative tRNA pseudouridine synthase-like [Vitis
           vinifera]
          Length = 564

 Score =  209 bits (531), Expect = 2e-51
 Identities = 106/201 (52%), Positives = 138/201 (68%), Gaps = 1/201 (0%)
 Frame = +2

Query: 2   SFDARRECNIRKYSYLLPAEIIGIRNNLSAAEIDRHLSDFNDILSSFEGEHPFHNYTIXX 181
           SFDARREC++R+YSYLLPAEIIGI++N SA+EID H+++FNDIL++FEGEHPF NYTI  
Sbjct: 178 SFDARRECDLRRYSYLLPAEIIGIKSNSSASEIDHHIAEFNDILNTFEGEHPFQNYTIRS 237

Query: 182 XXXXXXXXXXXXNEISDPKIEERDEEASDSEFEEGDEVEIIGANEVLGTNV-EGKNSKFS 358
                             +  +   EAS SEFE  D  E  G N V+ ++  EG+N   S
Sbjct: 238 KYRKQFPAKQSPGNGGVFRRAKSSGEASTSEFEVSDGEENSGINGVISSDYDEGENQNSS 297

Query: 359 RFISPDKLMLGMDNAHKNGLSDKNPHFPIHARWLYEPDEKDRISASHFRRIFHCSCGKLK 538
              S  +  +G  N ++ GL +++P   + ARWL+ PDE+DRISASHFR+IF+CSCGKL+
Sbjct: 298 ESTSFVEHPVGSSNNNEKGLKEQSPKLVVRARWLHGPDERDRISASHFRKIFNCSCGKLE 357

Query: 539 HLLGMSYVEISICGESFMLHQ 601
             LG+ YVE+SICGESFMLHQ
Sbjct: 358 KFLGLDYVELSICGESFMLHQ 378



 Score =  192 bits (489), Expect = 1e-46
 Identities = 99/140 (70%), Positives = 116/140 (82%)
 Frame = +3

Query: 762  GGYWIL*QIRKMMGTAVAVKCGLLARDILELSLNKFSRIVLPLAPSEVLFLRGNNFVLRN 941
            G  ++L QIRKM+GTA+AVK  LL RDIL LSL KFSRIVLPLAPSEVL LRGN+F +R 
Sbjct: 371  GESFMLHQIRKMVGTAIAVKRELLPRDILTLSLTKFSRIVLPLAPSEVLILRGNSFSVRK 430

Query: 942  LPGNVTRPEMLTLTESEEILGLVDEFYISLVLPQVSKFLNPLKSPWMDWLEILDANTGIP 1121
             PGNV RPEMLTL ESEEIL  VDEFY S++LPQVSKFL+P KSPW DWLE L  ++ IP
Sbjct: 431  KPGNVKRPEMLTLMESEEILKSVDEFYTSVILPQVSKFLDPSKSPWHDWLENLTLSS-IP 489

Query: 1122 DSQLDEVRNAWKIWKENFQS 1181
            +++LD+VR AWK+WKENF+S
Sbjct: 490  EAELDDVRTAWKLWKENFRS 509


>emb|CAN68579.1| hypothetical protein VITISV_034891 [Vitis vinifera]
          Length = 602

 Score =  206 bits (524), Expect = 1e-50
 Identities = 105/201 (52%), Positives = 137/201 (68%), Gaps = 1/201 (0%)
 Frame = +2

Query: 2   SFDARRECNIRKYSYLLPAEIIGIRNNLSAAEIDRHLSDFNDILSSFEGEHPFHNYTIXX 181
           SFDARREC++R+YSYLLPAEIIGI++N SA+EID H+++FNDIL++FEGEHPF NYTI  
Sbjct: 178 SFDARRECDLRRYSYLLPAEIIGIKSNSSASEIDHHIAEFNDILNTFEGEHPFQNYTIRS 237

Query: 182 XXXXXXXXXXXXNEISDPKIEERDEEASDSEFEEGDEVEIIGANEVLGTNV-EGKNSKFS 358
                             +  +   EAS SEFE  D  E  G N V+ ++  EG+N   S
Sbjct: 238 KYRKQFPAKQSPGNGGVFRRAKSSGEASTSEFEVSDGEENSGVNGVISSDYDEGENQNSS 297

Query: 359 RFISPDKLMLGMDNAHKNGLSDKNPHFPIHARWLYEPDEKDRISASHFRRIFHCSCGKLK 538
              S  +  +G  N ++ GL +++    + ARWL+ PDE+DRISASHFR+IF+CSCGKL+
Sbjct: 298 ESTSFVEHPVGSSNNNEKGLKEQSSKLVVRARWLHGPDERDRISASHFRKIFNCSCGKLE 357

Query: 539 HLLGMSYVEISICGESFMLHQ 601
             LG+ YVE+SICGESFMLHQ
Sbjct: 358 KFLGLDYVELSICGESFMLHQ 378



 Score =  192 bits (489), Expect = 1e-46
 Identities = 99/140 (70%), Positives = 116/140 (82%)
 Frame = +3

Query: 762  GGYWIL*QIRKMMGTAVAVKCGLLARDILELSLNKFSRIVLPLAPSEVLFLRGNNFVLRN 941
            G  ++L QIRKM+GTA+AVK  LL RDIL LSL KFSRIVLPLAPSEVL LRGN+F +R 
Sbjct: 371  GESFMLHQIRKMVGTAIAVKRELLPRDILTLSLTKFSRIVLPLAPSEVLILRGNSFSVRK 430

Query: 942  LPGNVTRPEMLTLTESEEILGLVDEFYISLVLPQVSKFLNPLKSPWMDWLEILDANTGIP 1121
             PGNV RPEMLTL ESEEIL  VDEFY S++LPQVSKFL+P KSPW DWLE L  ++ IP
Sbjct: 431  KPGNVKRPEMLTLMESEEILKSVDEFYTSVILPQVSKFLDPSKSPWHDWLENLTLSS-IP 489

Query: 1122 DSQLDEVRNAWKIWKENFQS 1181
            +++LD+VR AWK+WKENF+S
Sbjct: 490  EAELDDVRTAWKLWKENFRS 509


>emb|CBI15850.3| unnamed protein product [Vitis vinifera]
          Length = 495

 Score =  192 bits (489), Expect = 1e-46
 Identities = 99/140 (70%), Positives = 116/140 (82%)
 Frame = +3

Query: 762  GGYWIL*QIRKMMGTAVAVKCGLLARDILELSLNKFSRIVLPLAPSEVLFLRGNNFVLRN 941
            G  ++L QIRKM+GTA+AVK  LL RDIL LSL KFSRIVLPLAPSEVL LRGN+F +R 
Sbjct: 350  GESFMLHQIRKMVGTAIAVKRELLPRDILTLSLTKFSRIVLPLAPSEVLILRGNSFSVRK 409

Query: 942  LPGNVTRPEMLTLTESEEILGLVDEFYISLVLPQVSKFLNPLKSPWMDWLEILDANTGIP 1121
             PGNV RPEMLTL ESEEIL  VDEFY S++LPQVSKFL+P KSPW DWLE L  ++ IP
Sbjct: 410  KPGNVKRPEMLTLMESEEILKSVDEFYTSVILPQVSKFLDPSKSPWHDWLENLTLSS-IP 468

Query: 1122 DSQLDEVRNAWKIWKENFQS 1181
            +++LD+VR AWK+WKENF+S
Sbjct: 469  EAELDDVRTAWKLWKENFRS 488



 Score =  189 bits (479), Expect = 2e-45
 Identities = 96/200 (48%), Positives = 130/200 (65%)
 Frame = +2

Query: 2   SFDARRECNIRKYSYLLPAEIIGIRNNLSAAEIDRHLSDFNDILSSFEGEHPFHNYTIXX 181
           SFDARREC++R+YSYLLPAEIIGI++N SA+EID H+++FNDIL++FEGEHPF NYTI  
Sbjct: 178 SFDARRECDLRRYSYLLPAEIIGIKSNSSASEIDHHIAEFNDILNTFEGEHPFQNYTI-- 235

Query: 182 XXXXXXXXXXXXNEISDPKIEERDEEASDSEFEEGDEVEIIGANEVLGTNVEGKNSKFSR 361
                             + + R +  +      G       ++ +     EG+N   S 
Sbjct: 236 ------------------RSKYRKQFPAKQSPGNGGVFRRAKSSVISSDYDEGENQNSSE 277

Query: 362 FISPDKLMLGMDNAHKNGLSDKNPHFPIHARWLYEPDEKDRISASHFRRIFHCSCGKLKH 541
             S  +  +G  N ++ GL +++P   + ARWL+ PDE+DRISASHFR+IF+CSCGKL+ 
Sbjct: 278 STSFVEHPVGSSNNNEKGLKEQSPKLVVRARWLHGPDERDRISASHFRKIFNCSCGKLEK 337

Query: 542 LLGMSYVEISICGESFMLHQ 601
            LG+ YVE+SICGESFMLHQ
Sbjct: 338 FLGLDYVELSICGESFMLHQ 357


>ref|XP_002517734.1| pseudouridylate synthase, putative [Ricinus communis]
           gi|223543132|gb|EEF44666.1| pseudouridylate synthase,
           putative [Ricinus communis]
          Length = 377

 Score =  185 bits (469), Expect = 3e-44
 Identities = 108/212 (50%), Positives = 126/212 (59%), Gaps = 1/212 (0%)
 Frame = +2

Query: 2   SFDARRECNIRKYSYLLPAEIIGIRNNLSAAEIDRHLSDFNDILSSFEGEHPFHNYTIXX 181
           SFD RRECN+RKYSYLLPAEIIGI+ + ++AEID H+SDFNDIL++FEGEHPFHNYTI  
Sbjct: 169 SFDPRRECNLRKYSYLLPAEIIGIKGHFTSAEIDNHISDFNDILNAFEGEHPFHNYTIRS 228

Query: 182 XXXXXXXXXXXXNEISDPKIEERDEEASDSEFEEGDEVEIIGANEVLGTNVEGKNSKFSR 361
                            PK      E S SE E+ D  E    +E+   N+E  N     
Sbjct: 229 KYRKQYPTAITGRV---PKRARSSSERSTSESEKSDGEEDYEIDEI---NIEDHNGSIQ- 281

Query: 362 FISPDKLMLGMDNAHKNG-LSDKNPHFPIHARWLYEPDEKDRISASHFRRIFHCSCGKLK 538
             S  K      N  K G L  +  +  I ARWLYEPDE DRI ASHFR+IF CSCGKL+
Sbjct: 282 --SSSKFR--FSNQQKGGVLEQQQYNAGILARWLYEPDETDRIGASHFRKIFRCSCGKLE 337

Query: 539 HLLGMSYVEISICGESFMLHQCNLWMT*CGLF 634
              G  +VEISI GESFMLHQ  L M    +F
Sbjct: 338 TSKGFDFVEISIWGESFMLHQPLLVMVQVAIF 369


>ref|XP_003615971.1| Pseudouridylate synthase [Medicago truncatula]
            gi|355517306|gb|AES98929.1| Pseudouridylate synthase
            [Medicago truncatula]
          Length = 501

 Score =  184 bits (468), Expect = 3e-44
 Identities = 93/144 (64%), Positives = 115/144 (79%)
 Frame = +3

Query: 762  GGYWIL*QIRKMMGTAVAVKCGLLARDILELSLNKFSRIVLPLAPSEVLFLRGNNFVLRN 941
            G  ++L QIRKM+ TAVAVK  LL RDI+ LSL+KFSRI+LPLAPSEVL LRGN+F +R 
Sbjct: 356  GESFMLHQIRKMVATAVAVKRKLLPRDIITLSLSKFSRIILPLAPSEVLLLRGNSFSMRT 415

Query: 942  LPGNVTRPEMLTLTESEEILGLVDEFYISLVLPQVSKFLNPLKSPWMDWLEILDANTGIP 1121
             PGNVTRPEM T+ ESEEI  +VD+FY S++LPQVSKFL+P + PW++W+E  DA+T IP
Sbjct: 416  KPGNVTRPEMQTIVESEEINKVVDDFYRSVMLPQVSKFLDPSRVPWVEWIEKFDAHTSIP 475

Query: 1122 DSQLDEVRNAWKIWKENFQSGSNA 1193
            + QLDEVR A  +WKENF S  +A
Sbjct: 476  NDQLDEVRKARNLWKENFDSVMSA 499



 Score =  174 bits (440), Expect = 6e-41
 Identities = 94/200 (47%), Positives = 124/200 (62%)
 Frame = +2

Query: 2   SFDARRECNIRKYSYLLPAEIIGIRNNLSAAEIDRHLSDFNDILSSFEGEHPFHNYTIXX 181
           SFD R+EC +RKYSYLLPA+IIGI+++ S  EID H+S+FNDIL  FEG HPFHNYT   
Sbjct: 172 SFDPRKECVLRKYSYLLPADIIGIQSHSSNDEIDYHMSEFNDILKEFEGGHPFHNYTSRS 231

Query: 182 XXXXXXXXXXXXNEISDPKIEERDEEASDSEFEEGDEVEIIGANEVLGTNVEGKNSKFSR 361
                       ++  +         A +SE E+ DE E    +E L  N+E +N K S 
Sbjct: 232 RYRRHIPRRPSHSKCGEIL------SAYNSEQEDSDEEENFKVDEALTGNIECQNQKSSG 285

Query: 362 FISPDKLMLGMDNAHKNGLSDKNPHFPIHARWLYEPDEKDRISASHFRRIFHCSCGKLKH 541
             + D     ++  +K  L D++    + A+WLYEPDE DR++ASHFRR+F CS GKL+ 
Sbjct: 286 --TSDSCEPVIETGNKGNLHDQSSSSVVRAKWLYEPDEADRLNASHFRRVFRCSSGKLEK 343

Query: 542 LLGMSYVEISICGESFMLHQ 601
            +G SY+EI I GESFMLHQ
Sbjct: 344 SMGHSYIEIYIEGESFMLHQ 363