BLASTX nr result

ID: Panax21_contig00025452 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00025452
         (561 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277528.2| PREDICTED: uncharacterized protein LOC100253...   187   1e-45
ref|XP_002525522.1| nucleic acid binding protein, putative [Rici...   152   3e-35
ref|XP_004141539.1| PREDICTED: uncharacterized protein LOC101203...   148   7e-34
ref|XP_003516741.1| PREDICTED: uncharacterized protein LOC100800...   145   3e-33
ref|XP_003610912.1| Far upstream element-binding protein [Medica...   139   4e-31

>ref|XP_002277528.2| PREDICTED: uncharacterized protein LOC100253453 [Vitis vinifera]
          Length = 772

 Score =  187 bits (474), Expect = 1e-45
 Identities = 103/199 (51%), Positives = 112/199 (56%), Gaps = 13/199 (6%)
 Frame = -2

Query: 560 PARQSPISSGYNQQAFRPRG-TAASQWGPRGPHPAHQTGYDYQQRGSYQSQNLQYAAQAY 384
           P R S     YNQQ +RPRG T  SQWGPRGPHP   TGYDYQ RG+Y SQN QYA  +Y
Sbjct: 346 PVRSSTYPGSYNQQGYRPRGPTGPSQWGPRGPHPGQPTGYDYQ-RGAYPSQNQQYAPPSY 404

Query: 383 SNYPPQQLAPRSNFG--WEQRPQTIMQGPPPHSGYDYYGRQGGHAADA----------SN 240
             YPPQQ+APRS+FG  WEQRP   MQGPP   GYD+YG QGGH  DA          S 
Sbjct: 405 GGYPPQQMAPRSSFGSGWEQRPPANMQGPPQSGGYDFYGGQGGHGPDAPAAAPHSASMSI 464

Query: 239 HIHXXXXXXXXXXXXSQANYNYGQPQGLDXXXXXXXXXXXXXXXXXXGHGYNETKYENQV 60
           H              SQ NYNYGQPQG D                  GHGY+E KYE Q 
Sbjct: 465 HAPGPSPSPGMGPPPSQGNYNYGQPQGPD-YGQQAQYSQTGPPQQGYGHGYDEPKYEGQA 523

Query: 59  AIHNPYGGNGAVQQSAYPQ 3
             H PYGG+G+  Q  YPQ
Sbjct: 524 PTHPPYGGHGS--QPVYPQ 540


>ref|XP_002525522.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223535201|gb|EEF36880.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 798

 Score =  152 bits (385), Expect = 3e-35
 Identities = 92/200 (46%), Positives = 104/200 (52%), Gaps = 16/200 (8%)
 Frame = -2

Query: 554 RQSPISSGYNQQ-AFRPRG-TAASQWGPRGPHPAHQTGYDYQQRGSYQSQNLQYAAQAYS 381
           R SP+S GYNQQ ++RPRG T  S WGPRGPH +  + YDY  RG Y SQN QY   +Y 
Sbjct: 372 RLSPLSGGYNQQQSYRPRGPTGPSHWGPRGPHSSQPSPYDYHHRGPYPSQNSQYPPPSYG 431

Query: 380 NYPPQQLAPRSNF--GWEQRPQTIMQGPPPH-SGYDYYGRQGGHAAD----------ASN 240
            YPPQ + PR NF  GWEQRP   MQGP  H  GYDYYG QGGH  D           + 
Sbjct: 432 GYPPQHMGPRGNFGSGWEQRPPN-MQGPVSHGGGYDYYGGQGGHVPDHPSSAPISNPITG 490

Query: 239 HIHXXXXXXXXXXXXSQANYNYGQPQGLDXXXXXXXXXXXXXXXXXXGHGYNETKYENQV 60
           H              SQANYNYGQ  G D                  GHGY+E KY++  
Sbjct: 491 HATGPSPTPGMGHPPSQANYNYGQQHGPD--YGHQAPYSQAVSQHGYGHGYDEPKYDSHA 548

Query: 59  AIHNPYG-GNGAVQQSAYPQ 3
              +PYG GN    Q  YPQ
Sbjct: 549 QTQHPYGHGN---PQPVYPQ 565


>ref|XP_004141539.1| PREDICTED: uncharacterized protein LOC101203078 [Cucumis sativus]
           gi|449481514|ref|XP_004156205.1| PREDICTED:
           uncharacterized LOC101203078 [Cucumis sativus]
          Length = 787

 Score =  148 bits (373), Expect = 7e-34
 Identities = 88/197 (44%), Positives = 103/197 (52%), Gaps = 13/197 (6%)
 Frame = -2

Query: 554 RQSPISSGYNQQAFRPRGTAA-SQWGPRGPHPAHQTGYDYQQRGSYQSQNLQYAAQAYSN 378
           R SP S+G+NQQA+RPRG    +QWG RGPHP+H  GYDY  RG Y S N QY    Y N
Sbjct: 359 RPSPHSTGFNQQAYRPRGPGGPTQWGHRGPHPSHPAGYDYPHRGPYPSHNTQYQHPGYGN 418

Query: 377 YPPQQLAPRSNF--GWEQRPQTIMQGPPPHS-GYDYYGRQGGHAADA---------SNHI 234
           YP Q   PRS++  GWEQRP   MQGPPP S GYDYYG Q  H +DA          +H 
Sbjct: 419 YPQQMGGPRSSYGSGWEQRPPPSMQGPPPSSGGYDYYG-QRSHYSDAPPSHFPGAMPSHA 477

Query: 233 HXXXXXXXXXXXXSQANYNYGQPQGLDXXXXXXXXXXXXXXXXXXGHGYNETKYENQVAI 54
                        +Q++YNY Q QG                    GHGY E KY++    
Sbjct: 478 PGPSPAPTHGPPQTQSSYNYNQQQG--QGYGHTAPYSQAAPHQSYGHGY-EQKYDHHAPA 534

Query: 53  HNPYGGNGAVQQSAYPQ 3
            NPY G+G  Q   YPQ
Sbjct: 535 QNPYSGHGNAQH--YPQ 549


>ref|XP_003516741.1| PREDICTED: uncharacterized protein LOC100800173 [Glycine max]
          Length = 793

 Score =  145 bits (367), Expect = 3e-33
 Identities = 88/196 (44%), Positives = 103/196 (52%), Gaps = 15/196 (7%)
 Frame = -2

Query: 545 PISSGYNQQAFRP-RGTAAS-QWGPRGPHPAHQTGYDYQQRGSYQSQNLQYAAQAYSNYP 372
           P S G+ QQA+RP RG+    QWG RG H    T YDYQ RG Y S N  YA   Y NY 
Sbjct: 371 PSSGGFGQQAYRPPRGSGGPPQWGQRGSHFGQPTAYDYQHRGPYPSHNQPYAPPPYGNY- 429

Query: 371 PQQLAPRSNF--GWEQRPQTIMQGPPPHS-GYDYYGRQGGHAAD----------ASNHIH 231
           PQ +APRS+F  GWEQRP    QGPPPH+ GY+YYG QGGH ++          A  H  
Sbjct: 430 PQHMAPRSSFGSGWEQRPHHSFQGPPPHNGGYEYYGGQGGHLSEAPPSTQLPSSAPPHGA 489

Query: 230 XXXXXXXXXXXXSQANYNYGQPQGLDXXXXXXXXXXXXXXXXXXGHGYNETKYENQVAIH 51
                       +Q NYNYGQPQG D                  G GY+E+KYEN+    
Sbjct: 490 GPSPVPSMVPTPAQVNYNYGQPQGQD-YGHQTAYSQAGLPQQGYGQGYDESKYENRAPTQ 548

Query: 50  NPYGGNGAVQQSAYPQ 3
           + YGG+    QS YPQ
Sbjct: 549 HSYGGH-VNSQSTYPQ 563


>ref|XP_003610912.1| Far upstream element-binding protein [Medicago truncatula]
           gi|355512247|gb|AES93870.1| Far upstream element-binding
           protein [Medicago truncatula]
          Length = 807

 Score =  139 bits (349), Expect = 4e-31
 Identities = 87/201 (43%), Positives = 104/201 (51%), Gaps = 15/201 (7%)
 Frame = -2

Query: 560 PARQSPISSGYNQQAFRP-RGTAAS-QWGPRGPHPAHQTGYDYQQRGSYQSQNLQYAAQA 387
           P R S  S G+ QQA+RP RG+    QWG RG H      YDYQ RG Y S N  YA   
Sbjct: 382 PIRSS--SGGFGQQAYRPPRGSGGPPQWGQRGSHYGQPPSYDYQHRGPYPSHNQSYAPPP 439

Query: 386 YSNYPPQQLAPRSNF--GWEQRPQTIMQGPPPHS-GYDYYGRQGGHAADASN-------- 240
           Y NY PQ +APRS++  GWEQRP    QGPP H+ GYDYYG Q GH+++A +        
Sbjct: 440 YGNY-PQHMAPRSSYGSGWEQRPHQSFQGPPSHNGGYDYYGGQSGHSSEAPSSAQHPSSV 498

Query: 239 --HIHXXXXXXXXXXXXSQANYNYGQPQGLDXXXXXXXXXXXXXXXXXXGHGYNETKYEN 66
             H              +Q NYNYGQPQG D                  G GY+E+KYEN
Sbjct: 499 PQHGTGPSPLPSMGPSPAQMNYNYGQPQGQD-YGHQTPYQQAGHPQQGYGQGYDESKYEN 557

Query: 65  QVAIHNPYGGNGAVQQSAYPQ 3
           +     PYGG+ +  Q  YPQ
Sbjct: 558 RGPAQYPYGGH-SNPQPTYPQ 577


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