BLASTX nr result

ID: Panax21_contig00025447 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00025447
         (1495 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI22748.3| unnamed protein product [Vitis vinifera]              669   0.0  
ref|XP_002268211.1| PREDICTED: pentatricopeptide repeat-containi...   669   0.0  
ref|XP_002510791.1| pentatricopeptide repeat-containing protein,...   652   0.0  
ref|XP_004140840.1| PREDICTED: pentatricopeptide repeat-containi...   633   e-179
ref|XP_004157226.1| PREDICTED: pentatricopeptide repeat-containi...   632   e-179

>emb|CBI22748.3| unnamed protein product [Vitis vinifera]
          Length = 518

 Score =  669 bits (1725), Expect = 0.0
 Identities = 324/452 (71%), Positives = 375/452 (82%)
 Frame = +2

Query: 5    LNVNWKDSDFISGLDEEPMTNESLGSLGASGSYEGYSRPNFSVRRSFLEQARNDAKRAIE 184
            L+  W  S+F    DE P ++  +GS          S   F   + + +  R DA R ++
Sbjct: 76   LSEAWGVSNFDPVSDENPDSDNGIGSS---------SPAEFLAGKGYFDNMRLDASRVLQ 126

Query: 185  ILHQDGPGFDAKAALDDMQIRISGLIVREVLLGILTNINYANKIRYAKLGYKFFIWSGQQ 364
            IL QD PGF  KAALD++QIR+SG +VREVLL IL  +NY NK R AKLGYKFF+WSGQQ
Sbjct: 127  ILQQDCPGFSTKAALDELQIRVSGGLVREVLLEILKTVNYTNKERCAKLGYKFFMWSGQQ 186

Query: 365  ENYSHTVNSYHLMMKIFADSEEYKAMWRLVDEMVEKGFPTTARTFNIVICTCGQAGLARK 544
            ENY HTVN+YHL+MKIFA+S+E+KAMWRLVDEM+E+GFP TARTF I+ICTCG+AGLAR+
Sbjct: 187  ENYRHTVNAYHLIMKIFAESDEFKAMWRLVDEMIEQGFPVTARTFQILICTCGEAGLARR 246

Query: 545  VVERFIKSKTFYYRPFKHAFNAIIHSLLTLKQYKLIEWVYQQMLVEGHHPDILTYNVLMC 724
             VERF+KSK F YRPFKH++NAI+H LL LKQYKL+EWVYQQML+E + PDILTYN++MC
Sbjct: 247  AVERFVKSKNFNYRPFKHSYNAILHCLLCLKQYKLVEWVYQQMLLEDYSPDILTYNIVMC 306

Query: 725  AKYRLGKLDQFHRLLDEMCRSGFSPDFHTFNILLHVLGKGDKPLAALNLLNHMKEVGIEP 904
             KYRLGKLDQFHRLL+E+  +GFSPDFHTFNILLH+LGKG+KPLAAL+LLNHMKEVG +P
Sbjct: 307  TKYRLGKLDQFHRLLEELGTNGFSPDFHTFNILLHLLGKGNKPLAALDLLNHMKEVGFDP 366

Query: 905  SVLHFTTLIDGLSRAGNLDACKYFFDEMNKYGCRPDVVCYTVMITGFIVAGEQEMAQDLF 1084
            SVLHFTTLIDGLSRAGNLDACKYFFDEM K GC PDVVCYTVMITG+IVAGE EMAQ LF
Sbjct: 367  SVLHFTTLIDGLSRAGNLDACKYFFDEMIKLGCMPDVVCYTVMITGYIVAGELEMAQGLF 426

Query: 1085 NEMIAKGQVPNVFTYNSMIRGLCMAGKFKEACLMLEEMESRGCNPNFLVYNTLVSYMRNA 1264
             EM  KGQ+PNVFTYNSMIRGLCMA KF+EA  ML+EMESRGCNPNFLVYNTLV  +RNA
Sbjct: 427  EEMTVKGQLPNVFTYNSMIRGLCMAEKFEEARSMLKEMESRGCNPNFLVYNTLVGNLRNA 486

Query: 1265 GKLSEAREVIKMMVEKGQYIHLISKFKRYRRC 1360
            GKL EA EVI+ MV+KGQY+HL+SKFK YRRC
Sbjct: 487  GKLKEAHEVIRHMVDKGQYVHLLSKFKGYRRC 518


>ref|XP_002268211.1| PREDICTED: pentatricopeptide repeat-containing protein At1g55630-like
            [Vitis vinifera]
          Length = 514

 Score =  669 bits (1725), Expect = 0.0
 Identities = 324/452 (71%), Positives = 375/452 (82%)
 Frame = +2

Query: 5    LNVNWKDSDFISGLDEEPMTNESLGSLGASGSYEGYSRPNFSVRRSFLEQARNDAKRAIE 184
            L+  W  S+F    DE P ++  +GS          S   F   + + +  R DA R ++
Sbjct: 72   LSEAWGVSNFDPVSDENPDSDNGIGSS---------SPAEFLAGKGYFDNMRLDASRVLQ 122

Query: 185  ILHQDGPGFDAKAALDDMQIRISGLIVREVLLGILTNINYANKIRYAKLGYKFFIWSGQQ 364
            IL QD PGF  KAALD++QIR+SG +VREVLL IL  +NY NK R AKLGYKFF+WSGQQ
Sbjct: 123  ILQQDCPGFSTKAALDELQIRVSGGLVREVLLEILKTVNYTNKERCAKLGYKFFMWSGQQ 182

Query: 365  ENYSHTVNSYHLMMKIFADSEEYKAMWRLVDEMVEKGFPTTARTFNIVICTCGQAGLARK 544
            ENY HTVN+YHL+MKIFA+S+E+KAMWRLVDEM+E+GFP TARTF I+ICTCG+AGLAR+
Sbjct: 183  ENYRHTVNAYHLIMKIFAESDEFKAMWRLVDEMIEQGFPVTARTFQILICTCGEAGLARR 242

Query: 545  VVERFIKSKTFYYRPFKHAFNAIIHSLLTLKQYKLIEWVYQQMLVEGHHPDILTYNVLMC 724
             VERF+KSK F YRPFKH++NAI+H LL LKQYKL+EWVYQQML+E + PDILTYN++MC
Sbjct: 243  AVERFVKSKNFNYRPFKHSYNAILHCLLCLKQYKLVEWVYQQMLLEDYSPDILTYNIVMC 302

Query: 725  AKYRLGKLDQFHRLLDEMCRSGFSPDFHTFNILLHVLGKGDKPLAALNLLNHMKEVGIEP 904
             KYRLGKLDQFHRLL+E+  +GFSPDFHTFNILLH+LGKG+KPLAAL+LLNHMKEVG +P
Sbjct: 303  TKYRLGKLDQFHRLLEELGTNGFSPDFHTFNILLHLLGKGNKPLAALDLLNHMKEVGFDP 362

Query: 905  SVLHFTTLIDGLSRAGNLDACKYFFDEMNKYGCRPDVVCYTVMITGFIVAGEQEMAQDLF 1084
            SVLHFTTLIDGLSRAGNLDACKYFFDEM K GC PDVVCYTVMITG+IVAGE EMAQ LF
Sbjct: 363  SVLHFTTLIDGLSRAGNLDACKYFFDEMIKLGCMPDVVCYTVMITGYIVAGELEMAQGLF 422

Query: 1085 NEMIAKGQVPNVFTYNSMIRGLCMAGKFKEACLMLEEMESRGCNPNFLVYNTLVSYMRNA 1264
             EM  KGQ+PNVFTYNSMIRGLCMA KF+EA  ML+EMESRGCNPNFLVYNTLV  +RNA
Sbjct: 423  EEMTVKGQLPNVFTYNSMIRGLCMAEKFEEARSMLKEMESRGCNPNFLVYNTLVGNLRNA 482

Query: 1265 GKLSEAREVIKMMVEKGQYIHLISKFKRYRRC 1360
            GKL EA EVI+ MV+KGQY+HL+SKFK YRRC
Sbjct: 483  GKLKEAHEVIRHMVDKGQYVHLLSKFKGYRRC 514


>ref|XP_002510791.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223549906|gb|EEF51393.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 475

 Score =  652 bits (1683), Expect = 0.0
 Identities = 320/430 (74%), Positives = 363/430 (84%), Gaps = 4/430 (0%)
 Frame = +2

Query: 50   EEPMT----NESLGSLGASGSYEGYSRPNFSVRRSFLEQARNDAKRAIEILHQDGPGFDA 217
            EEP+     N   GS G+     G    N+S R+ F E  R DA R ++IL QDGPGFDA
Sbjct: 43   EEPLKRLWKNSDFGSCGSENRDNG----NYSQRKWFFENVRIDAARVLDILRQDGPGFDA 98

Query: 218  KAALDDMQIRISGLIVREVLLGILTNINYANKIRYAKLGYKFFIWSGQQENYSHTVNSYH 397
            KAAL ++ +R+SGL+VREVL GIL NI   NK R AKLGYKFFIWS QQENY HT N+YH
Sbjct: 99   KAALSELDLRVSGLLVREVLAGILRNIGIDNKTRCAKLGYKFFIWSSQQENYRHTANNYH 158

Query: 398  LMMKIFADSEEYKAMWRLVDEMVEKGFPTTARTFNIVICTCGQAGLARKVVERFIKSKTF 577
            L+MKIFAD EE+KAMWRL+DEMVE GFPTTARTFNI+ICTCG AGLARKVVERFIKSKTF
Sbjct: 159  LIMKIFADCEEFKAMWRLLDEMVENGFPTTARTFNILICTCGGAGLARKVVERFIKSKTF 218

Query: 578  YYRPFKHAFNAIIHSLLTLKQYKLIEWVYQQMLVEGHHPDILTYNVLMCAKYRLGKLDQF 757
             YRPFKH++NAI+ SLL +++YKLIEWV+QQMLVEG+ PD LTYN+LMCAKYRLGKL  F
Sbjct: 219  NYRPFKHSYNAILLSLLAIREYKLIEWVHQQMLVEGYCPDTLTYNILMCAKYRLGKLHHF 278

Query: 758  HRLLDEMCRSGFSPDFHTFNILLHVLGKGDKPLAALNLLNHMKEVGIEPSVLHFTTLIDG 937
            HRLLDEM RSGFSPDFHT+NILLHVLGKG+KP+AAL LLNHMKE+G +PS+LHFTTLIDG
Sbjct: 279  HRLLDEMGRSGFSPDFHTYNILLHVLGKGNKPIAALKLLNHMKEIGFDPSILHFTTLIDG 338

Query: 938  LSRAGNLDACKYFFDEMNKYGCRPDVVCYTVMITGFIVAGEQEMAQDLFNEMIAKGQVPN 1117
            LSRAGNLDAC YFFDEM K G  PDVVCYTVMITG+IVAGE E A+++F+EMIA+GQ+PN
Sbjct: 339  LSRAGNLDACNYFFDEMIKNGFVPDVVCYTVMITGYIVAGELEKAREIFDEMIARGQLPN 398

Query: 1118 VFTYNSMIRGLCMAGKFKEACLMLEEMESRGCNPNFLVYNTLVSYMRNAGKLSEAREVIK 1297
            VFTYNSMIRGLCMAGKF+EA  ML+EM SRGC PNFLVYNTLV+ +RNAGKLSEAREVIK
Sbjct: 399  VFTYNSMIRGLCMAGKFEEARCMLKEMGSRGCKPNFLVYNTLVNNLRNAGKLSEAREVIK 458

Query: 1298 MMVEKGQYIH 1327
             M E GQY+H
Sbjct: 459  EMAENGQYVH 468


>ref|XP_004140840.1| PREDICTED: pentatricopeptide repeat-containing protein At1g55630-like
            [Cucumis sativus]
          Length = 476

 Score =  633 bits (1632), Expect = e-179
 Identities = 305/427 (71%), Positives = 360/427 (84%), Gaps = 2/427 (0%)
 Frame = +2

Query: 86   GASGSYEGYSR--PNFSVRRSFLEQARNDAKRAIEILHQDGPGFDAKAALDDMQIRISGL 259
            G S S+E  SR   +FS RRSFL+ A+ DA++ IEIL QDGPGFD   ALD++Q+++SG+
Sbjct: 50   GNSDSFETDSRRWDDFSFRRSFLKDAKIDAEKVIEILKQDGPGFDTFLALDELQLKVSGV 109

Query: 260  IVREVLLGILTNINYANKIRYAKLGYKFFIWSGQQENYSHTVNSYHLMMKIFADSEEYKA 439
            +V EVL GIL + +  NK + AKLGYKFFIWSG+ ENY HTVNSYH++MKIFA+ EE+KA
Sbjct: 110  LVGEVLKGILKSKSVLNKTQCAKLGYKFFIWSGRIENYRHTVNSYHIIMKIFAECEEFKA 169

Query: 440  MWRLVDEMVEKGFPTTARTFNIVICTCGQAGLARKVVERFIKSKTFYYRPFKHAFNAIIH 619
            MWR++DEM EKG+P TARTF I+ICTCG+AGLA++VVERFIKSKTF +RP+KH++NAI+H
Sbjct: 170  MWRVLDEMTEKGYPVTARTFMILICTCGEAGLAKRVVERFIKSKTFNFRPYKHSYNAILH 229

Query: 620  SLLTLKQYKLIEWVYQQMLVEGHHPDILTYNVLMCAKYRLGKLDQFHRLLDEMCRSGFSP 799
             L+ +KQYKLI WVY QML++ H PDILTYNVL+ +  +LGKLDQFHRLLDEM R GFSP
Sbjct: 230  GLVIVKQYKLIGWVYDQMLLDDHSPDILTYNVLLFSSCKLGKLDQFHRLLDEMARKGFSP 289

Query: 800  DFHTFNILLHVLGKGDKPLAALNLLNHMKEVGIEPSVLHFTTLIDGLSRAGNLDACKYFF 979
            DFHT+NILL+VLGKGDKPLAALNLLNHM+EVG  P+VLHFTTLI+GLSRAGNLDACKYFF
Sbjct: 290  DFHTYNILLYVLGKGDKPLAALNLLNHMREVGFGPNVLHFTTLINGLSRAGNLDACKYFF 349

Query: 980  DEMNKYGCRPDVVCYTVMITGFIVAGEQEMAQDLFNEMIAKGQVPNVFTYNSMIRGLCMA 1159
            DE+   GC PDVVCYTVMIT F  AG+ E A+  F+EMI KGQ+PNVFTYNSMIRG CM 
Sbjct: 350  DELGNNGCIPDVVCYTVMITSFTEAGQHEKARAFFDEMIMKGQLPNVFTYNSMIRGFCMV 409

Query: 1160 GKFKEACLMLEEMESRGCNPNFLVYNTLVSYMRNAGKLSEAREVIKMMVEKGQYIHLISK 1339
            GKFKEA  ML EMESRGC PNFLVY+TLVSY+RNAGKL EA +VIK MVE GQY HL++K
Sbjct: 410  GKFKEAYSMLSEMESRGCRPNFLVYSTLVSYLRNAGKLGEAHKVIKQMVENGQYAHLMTK 469

Query: 1340 FKRYRRC 1360
            FK YRRC
Sbjct: 470  FKGYRRC 476


>ref|XP_004157226.1| PREDICTED: pentatricopeptide repeat-containing protein At1g55630-like
            [Cucumis sativus]
          Length = 476

 Score =  632 bits (1630), Expect = e-179
 Identities = 304/427 (71%), Positives = 361/427 (84%), Gaps = 2/427 (0%)
 Frame = +2

Query: 86   GASGSYEGYSR--PNFSVRRSFLEQARNDAKRAIEILHQDGPGFDAKAALDDMQIRISGL 259
            G S S+E  +R   +FS+RRSFL+ A+ DA++ IEIL QDGPGFD   ALD++Q+++SG+
Sbjct: 50   GNSDSFETDNRRWDDFSLRRSFLKDAKIDAEKVIEILKQDGPGFDTFLALDELQLKVSGV 109

Query: 260  IVREVLLGILTNINYANKIRYAKLGYKFFIWSGQQENYSHTVNSYHLMMKIFADSEEYKA 439
            +V EVL GIL + +  NK + AKLGYKFFIWSG+ ENY HTVNSYH++MKIFA+ EE+KA
Sbjct: 110  LVGEVLKGILKSKSVLNKTQCAKLGYKFFIWSGRIENYRHTVNSYHIIMKIFAECEEFKA 169

Query: 440  MWRLVDEMVEKGFPTTARTFNIVICTCGQAGLARKVVERFIKSKTFYYRPFKHAFNAIIH 619
            MWR++DEM EKG+P TARTF I+ICTCG+AGLA++VVERFIKSKTF +RP+KH++NAI+H
Sbjct: 170  MWRVLDEMTEKGYPVTARTFMILICTCGEAGLAKRVVERFIKSKTFNFRPYKHSYNAILH 229

Query: 620  SLLTLKQYKLIEWVYQQMLVEGHHPDILTYNVLMCAKYRLGKLDQFHRLLDEMCRSGFSP 799
             L+ +KQYKLI WVY QML++ H PDILTYNVL+ +  +LGKLDQFHRLLDEM R GFSP
Sbjct: 230  GLVIVKQYKLIGWVYDQMLLDDHSPDILTYNVLLFSSCKLGKLDQFHRLLDEMARKGFSP 289

Query: 800  DFHTFNILLHVLGKGDKPLAALNLLNHMKEVGIEPSVLHFTTLIDGLSRAGNLDACKYFF 979
            DFHT+NILL+VLGKGDKPLAALNLLNHM+EVG  P+VLHFTTLI+GLSRAGNLDACKYFF
Sbjct: 290  DFHTYNILLYVLGKGDKPLAALNLLNHMREVGFGPNVLHFTTLINGLSRAGNLDACKYFF 349

Query: 980  DEMNKYGCRPDVVCYTVMITGFIVAGEQEMAQDLFNEMIAKGQVPNVFTYNSMIRGLCMA 1159
            DE+   GC PDVVCYTVMIT F  AG+ E A+  F+EMI KGQ+PNVFTYNSMIRG CM 
Sbjct: 350  DELGNNGCIPDVVCYTVMITSFTEAGQHEKARAFFDEMIMKGQLPNVFTYNSMIRGFCMV 409

Query: 1160 GKFKEACLMLEEMESRGCNPNFLVYNTLVSYMRNAGKLSEAREVIKMMVEKGQYIHLISK 1339
            GKFKEA  ML EMESRGC PNFLVY+TLVSY+RNAGKL EA +VIK MVE GQY HL++K
Sbjct: 410  GKFKEAYSMLSEMESRGCRPNFLVYSTLVSYLRNAGKLGEAHKVIKRMVENGQYAHLMTK 469

Query: 1340 FKRYRRC 1360
            FK YRRC
Sbjct: 470  FKGYRRC 476


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