BLASTX nr result

ID: Panax21_contig00025445 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00025445
         (1068 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004155261.1| PREDICTED: CCR4-NOT transcription complex su...   380   e-103
ref|XP_004134286.1| PREDICTED: LOW QUALITY PROTEIN: CCR4-NOT tra...   375   e-101
ref|XP_002270543.2| PREDICTED: CCR4-NOT transcription complex su...   374   e-101
emb|CBI24630.3| unnamed protein product [Vitis vinifera]              374   e-101
ref|XP_002301259.1| predicted protein [Populus trichocarpa] gi|2...   361   1e-97

>ref|XP_004155261.1| PREDICTED: CCR4-NOT transcription complex subunit 1-like [Cucumis
           sativus]
          Length = 962

 Score =  380 bits (975), Expect = e-103
 Identities = 184/302 (60%), Positives = 246/302 (81%)
 Frame = -2

Query: 908 MLPFSVMTSSQIRYLLESLNETNSVSVYQELCQYIGYGTDGSILVLQTCFDQLNIFGKDL 729
           ML FS  TSSQIR+LL SL E+N+ SV +EL ++I  G +GS ++L+TC D     G DL
Sbjct: 1   MLMFSTATSSQIRFLLHSLTESNAESVLKELSEFIDCGIEGSFILLRTCLDHFTSHGTDL 60

Query: 728 KNMQLEPIFASIFKHILDKPNFSTVLCESVRSTAVSEDLLENLCNALQLSAPEKIGVGLA 549
           +N  L  + +S+FKH+LD+PNFST+LCES++S  +++  LEN+ N L LS  E+IGVGLA
Sbjct: 61  ENPLLLLVISSVFKHLLDRPNFSTILCESLKSRDINQVTLENISNLLNLSMCERIGVGLA 120

Query: 548 LSDSENLDIRICGKNFCMAQIAQLCANYVSMDSAEQIQNILIFLNRSEGLCKHVDSFMQM 369
           +SDSENLD R+CGKNFC++QI +LCAN VS+DS +QIQ+I++FL RSEGL KH+DSFMQM
Sbjct: 121 VSDSENLDARLCGKNFCISQIEELCANAVSVDSTQQIQDIIMFLQRSEGLSKHLDSFMQM 180

Query: 368 LSLVQLQEDSEFILAPLLSDELREANFFRNLDMLNESSENDFDTILAEMEKELNMADLMK 189
           LSLVQL++ +EF+L+PLLSDELRE  F R++++ +ES +NDFD+ILAEMEKE++M D+MK
Sbjct: 181 LSLVQLKDVTEFVLSPLLSDELREEKFLRDVNLSHESLDNDFDSILAEMEKEMSMGDIMK 240

Query: 188 ELGYGCTVNVSQCKEMLSLFLPLSEVTVARILGTIVRTNTGLENNQNTYLTFCSAIGSSS 9
           ELGYGCTVN +QCKE+LSLFLPL+E+T+++ILG I R +TGLE+++N Y TF  A+G S 
Sbjct: 241 ELGYGCTVNATQCKEILSLFLPLTEITISKILGMIARNHTGLEDSRNIYATFSLALGFSG 300

Query: 8   LS 3
           LS
Sbjct: 301 LS 302


>ref|XP_004134286.1| PREDICTED: LOW QUALITY PROTEIN: CCR4-NOT transcription complex
           subunit 1-like [Cucumis sativus]
          Length = 2427

 Score =  375 bits (962), Expect = e-101
 Identities = 184/303 (60%), Positives = 246/303 (81%), Gaps = 1/303 (0%)
 Frame = -2

Query: 908 MLPFSVMTSSQIRYLLESLNETNSVSVYQELCQYIGYGTDGSILVLQTCFDQLNIFGKDL 729
           ML FS  TSSQIR+LL SL E+N+ SV +EL ++I  G +GS ++L+TC D     G DL
Sbjct: 1   MLMFSTATSSQIRFLLHSLTESNAESVLKELSEFIDCGIEGSFILLRTCLDHFTSHGTDL 60

Query: 728 KNMQLEPIFASIFKHILDKPNFSTVLCESVRSTAVSEDLLENLCNALQLSAPEKIGVGLA 549
           +N  L  + +S+FKH+LD+PNFST+LCES++S  +++  LEN+ N L LS  E+IGVGLA
Sbjct: 61  ENPLLLLVISSVFKHLLDRPNFSTILCESLKSRDINQVTLENISNLLNLSMCERIGVGLA 120

Query: 548 LSDSENLDIRICGKNFCMAQIAQLCANYVSMDSAEQIQNILIFLNRSEGLCKHVDSFMQM 369
           +SDSENLD R+CGKNFC++QI +LCAN VS+DS +QIQ+I++FL RSEGL KH+DSFMQM
Sbjct: 121 VSDSENLDARLCGKNFCISQIEELCANAVSVDSTQQIQDIIMFLQRSEGLSKHLDSFMQM 180

Query: 368 LSLVQLQEDSEFILAPLLSDELREANFFR-NLDMLNESSENDFDTILAEMEKELNMADLM 192
           LSLVQL++ +EF+L+PLLSDELRE  F R ++++ +ES +NDFD+ILAEMEKE++M D+M
Sbjct: 181 LSLVQLKDVTEFVLSPLLSDELREEKFLRWDVNLSHESLDNDFDSILAEMEKEMSMGDIM 240

Query: 191 KELGYGCTVNVSQCKEMLSLFLPLSEVTVARILGTIVRTNTGLENNQNTYLTFCSAIGSS 12
           KELGYGCTVN +QCKE+LSLFLPL+E+T+++ILG I R +TGLE+++N Y TF  A+G S
Sbjct: 241 KELGYGCTVNATQCKEILSLFLPLTEITISKILGMIARNHTGLEDSRNIYSTFSLALGFS 300

Query: 11  SLS 3
            LS
Sbjct: 301 GLS 303


>ref|XP_002270543.2| PREDICTED: CCR4-NOT transcription complex subunit 1-like [Vitis
            vinifera]
          Length = 1586

 Score =  374 bits (960), Expect = e-101
 Identities = 187/304 (61%), Positives = 241/304 (79%), Gaps = 5/304 (1%)
 Frame = -2

Query: 899  FSVMTSSQIRYLLESLNETNSVS----VYQELCQYIGYGTDGSILVLQTCFDQLNIFGKD 732
            FS + SSQIR+LL  LN++N  S    V +ELCQ+I YG + SIL+LQTC D +N  G D
Sbjct: 178  FSSLISSQIRFLLHGLNDSNFDSNFDSVVRELCQFIEYGYEASILLLQTCLDHMNFHGGD 237

Query: 731  LKNMQLEP-IFASIFKHILDKPNFSTVLCESVRSTAVSEDLLENLCNALQLSAPEKIGVG 555
            + +MQL+P + A+IF+++LDKPNFSTVLCE++RS+ + E  L   CN LQ S  EKIG+G
Sbjct: 238  MNDMQLKPDVLAAIFRYLLDKPNFSTVLCEALRSSVIGEGFLGEFCNVLQFSVSEKIGLG 297

Query: 554  LALSDSENLDIRICGKNFCMAQIAQLCANYVSMDSAEQIQNILIFLNRSEGLCKHVDSFM 375
            LAL+DSEN D+R  G+NFCM QI +LC N  S+DS E+IQ I++FL +SEGL KHVDSFM
Sbjct: 298  LALADSENGDVRTSGQNFCMRQIEKLCGNPASIDSHEKIQKIIMFLYQSEGLSKHVDSFM 357

Query: 374  QMLSLVQLQEDSEFILAPLLSDELREANFFRNLDMLNESSENDFDTILAEMEKELNMADL 195
            QMLSL++ +E   F+LAPLLSD+L E +F RNLD+  + SEN+FD+ILAEME + +MAD+
Sbjct: 358  QMLSLMEFKERPPFVLAPLLSDDLHEDSFSRNLDLFYDFSENEFDSILAEMENDTSMADI 417

Query: 194  MKELGYGCTVNVSQCKEMLSLFLPLSEVTVARILGTIVRTNTGLENNQNTYLTFCSAIGS 15
            M+ELGYGCT++ S CKE+LSLFLPLSEVT++RIL TI RT+ GLE+NQN+Y TFCSAIGS
Sbjct: 418  MRELGYGCTLSTSHCKEVLSLFLPLSEVTLSRILSTIARTHAGLEDNQNSYSTFCSAIGS 477

Query: 14   SSLS 3
            S+LS
Sbjct: 478  SALS 481


>emb|CBI24630.3| unnamed protein product [Vitis vinifera]
          Length = 1496

 Score =  374 bits (960), Expect = e-101
 Identities = 187/304 (61%), Positives = 241/304 (79%), Gaps = 5/304 (1%)
 Frame = -2

Query: 899 FSVMTSSQIRYLLESLNETNSVS----VYQELCQYIGYGTDGSILVLQTCFDQLNIFGKD 732
           FS + SSQIR+LL  LN++N  S    V +ELCQ+I YG + SIL+LQTC D +N  G D
Sbjct: 5   FSSLISSQIRFLLHGLNDSNFDSNFDSVVRELCQFIEYGYEASILLLQTCLDHMNFHGGD 64

Query: 731 LKNMQLEP-IFASIFKHILDKPNFSTVLCESVRSTAVSEDLLENLCNALQLSAPEKIGVG 555
           + +MQL+P + A+IF+++LDKPNFSTVLCE++RS+ + E  L   CN LQ S  EKIG+G
Sbjct: 65  MNDMQLKPDVLAAIFRYLLDKPNFSTVLCEALRSSVIGEGFLGEFCNVLQFSVSEKIGLG 124

Query: 554 LALSDSENLDIRICGKNFCMAQIAQLCANYVSMDSAEQIQNILIFLNRSEGLCKHVDSFM 375
           LAL+DSEN D+R  G+NFCM QI +LC N  S+DS E+IQ I++FL +SEGL KHVDSFM
Sbjct: 125 LALADSENGDVRTSGQNFCMRQIEKLCGNPASIDSHEKIQKIIMFLYQSEGLSKHVDSFM 184

Query: 374 QMLSLVQLQEDSEFILAPLLSDELREANFFRNLDMLNESSENDFDTILAEMEKELNMADL 195
           QMLSL++ +E   F+LAPLLSD+L E +F RNLD+  + SEN+FD+ILAEME + +MAD+
Sbjct: 185 QMLSLMEFKERPPFVLAPLLSDDLHEDSFSRNLDLFYDFSENEFDSILAEMENDTSMADI 244

Query: 194 MKELGYGCTVNVSQCKEMLSLFLPLSEVTVARILGTIVRTNTGLENNQNTYLTFCSAIGS 15
           M+ELGYGCT++ S CKE+LSLFLPLSEVT++RIL TI RT+ GLE+NQN+Y TFCSAIGS
Sbjct: 245 MRELGYGCTLSTSHCKEVLSLFLPLSEVTLSRILSTIARTHAGLEDNQNSYSTFCSAIGS 304

Query: 14  SSLS 3
           S+LS
Sbjct: 305 SALS 308


>ref|XP_002301259.1| predicted protein [Populus trichocarpa] gi|222842985|gb|EEE80532.1|
           predicted protein [Populus trichocarpa]
          Length = 1987

 Score =  361 bits (927), Expect = 1e-97
 Identities = 178/297 (59%), Positives = 234/297 (78%)
 Frame = -2

Query: 908 MLPFSVMTSSQIRYLLESLNETNSVSVYQELCQYIGYGTDGSILVLQTCFDQLNIFGKDL 729
           M+  S    SQIR+LL SLNE N  SV+++LCQ++ Y  +GSIL LQTC D L     DL
Sbjct: 1   MIELSSTVPSQIRFLLHSLNEANVDSVFRDLCQFMEYELEGSILTLQTCLDYLKT---DL 57

Query: 728 KNMQLEPIFASIFKHILDKPNFSTVLCESVRSTAVSEDLLENLCNALQLSAPEKIGVGLA 549
           KNM LEP+ AS+FK +LDKPNF+TV C+S++ST ++ED LE L N L+LS  EKIG GLA
Sbjct: 58  KNMHLEPVLASVFKFVLDKPNFATVFCQSLKSTEITEDFLEKLSNLLKLSVAEKIGTGLA 117

Query: 548 LSDSENLDIRICGKNFCMAQIAQLCANYVSMDSAEQIQNILIFLNRSEGLCKHVDSFMQM 369
           LS+SEN D R+  K FC+A+I +LCAN V M+S EQIQNI++FL RSEGL KHVD+FMQM
Sbjct: 118 LSESENADTRMFAKKFCLAKIEELCANPVPMNSVEQIQNIVMFLQRSEGLSKHVDNFMQM 177

Query: 368 LSLVQLQEDSEFILAPLLSDELREANFFRNLDMLNESSENDFDTILAEMEKELNMADLMK 189
           LSL+Q ++   F+L PL+SDELREANF RN+D+++ S++++FD ILAEME+E+++ D++K
Sbjct: 178 LSLMQSKDVVPFVLTPLISDELREANFLRNMDLIHGSTDSEFDAILAEMEEEMSLGDIVK 237

Query: 188 ELGYGCTVNVSQCKEMLSLFLPLSEVTVARILGTIVRTNTGLENNQNTYLTFCSAIG 18
           ELGYGCT +V  CKE+LS FLPL+EVT+++ILGTI R  TGLE+NQ+T+ TF  A+G
Sbjct: 238 ELGYGCTFDVLHCKEILSPFLPLTEVTISKILGTIARNLTGLEDNQSTFSTFGLALG 294


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