BLASTX nr result

ID: Panax21_contig00025421 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00025421
         (561 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI28079.3| unnamed protein product [Vitis vinifera]              104   1e-20
ref|XP_002281054.1| PREDICTED: disease resistance protein RPP13-...   104   1e-20
ref|XP_003595124.1| Disease resistance RPP8-like protein [Medica...    79   6e-13
ref|NP_176187.1| NB-ARC domain-containing disease resistance pro...    74   1e-11
ref|XP_002521786.1| Disease resistance protein RPP13, putative [...    72   6e-11

>emb|CBI28079.3| unnamed protein product [Vitis vinifera]
          Length = 937

 Score =  104 bits (259), Expect = 1e-20
 Identities = 77/231 (33%), Positives = 108/231 (46%), Gaps = 49/231 (21%)
 Frame = +2

Query: 14   GFLMFPYTISNLKSLLTLNLQRCHGIVGLPTCFRKMKQLRHILLPKLPVASLSGRIMRQI 193
            G +  P TI NLK+L TL+ ++C+ +V LPT   KMK+LRHI+L  +       + + Q+
Sbjct: 560  GLVRLPSTIGNLKNLKTLDARQCNNLV-LPTVMWKMKELRHIILTPIATFEYQSKSIGQL 618

Query: 194  NRSTVFRKLDEISLPNLQTLIGCNDDVLKAKGFSKVTRLQKLGI---------------- 325
                  + ++++SLPNLQTL   N ++LKA    K T L+KLG+                
Sbjct: 619  ------QPIEDVSLPNLQTLHMINGNILKADCLRKFTNLRKLGLVCDVAQVTIILSDAMT 672

Query: 326  ----------------------------DHFTEYDLSLCKNVS-----KMQLRYPWGNLP 406
                                        D +   DL  C  +S      +   Y  G   
Sbjct: 673  ISDKLEKLTLTVLPSKKGKETKVDLFNADTYPLLDLPACPALSFSAYQNLSSLYLEGGFK 732

Query: 407  ETNKFPPNLTELTLTRTVLKEDSMETLGKLSNLKTLILGPNSYAGARMVCS 559
            +   FP +L +LTL +  L+ED METLGKL NLK L LG  SY G +MV S
Sbjct: 733  KLLDFPTSLIKLTLLQIQLEEDPMETLGKLPNLKKLYLGRFSYMGLKMVIS 783


>ref|XP_002281054.1| PREDICTED: disease resistance protein RPP13-like [Vitis vinifera]
          Length = 975

 Score =  104 bits (259), Expect = 1e-20
 Identities = 77/231 (33%), Positives = 108/231 (46%), Gaps = 49/231 (21%)
 Frame = +2

Query: 14   GFLMFPYTISNLKSLLTLNLQRCHGIVGLPTCFRKMKQLRHILLPKLPVASLSGRIMRQI 193
            G +  P TI NLK+L TL+ ++C+ +V LPT   KMK+LRHI+L  +       + + Q+
Sbjct: 598  GLVRLPSTIGNLKNLKTLDARQCNNLV-LPTVMWKMKELRHIILTPIATFEYQSKSIGQL 656

Query: 194  NRSTVFRKLDEISLPNLQTLIGCNDDVLKAKGFSKVTRLQKLGI---------------- 325
                  + ++++SLPNLQTL   N ++LKA    K T L+KLG+                
Sbjct: 657  ------QPIEDVSLPNLQTLHMINGNILKADCLRKFTNLRKLGLVCDVAQVTIILSDAMT 710

Query: 326  ----------------------------DHFTEYDLSLCKNVS-----KMQLRYPWGNLP 406
                                        D +   DL  C  +S      +   Y  G   
Sbjct: 711  ISDKLEKLTLTVLPSKKGKETKVDLFNADTYPLLDLPACPALSFSAYQNLSSLYLEGGFK 770

Query: 407  ETNKFPPNLTELTLTRTVLKEDSMETLGKLSNLKTLILGPNSYAGARMVCS 559
            +   FP +L +LTL +  L+ED METLGKL NLK L LG  SY G +MV S
Sbjct: 771  KLLDFPTSLIKLTLLQIQLEEDPMETLGKLPNLKKLYLGRFSYMGLKMVIS 821


>ref|XP_003595124.1| Disease resistance RPP8-like protein [Medicago truncatula]
            gi|355484172|gb|AES65375.1| Disease resistance RPP8-like
            protein [Medicago truncatula]
          Length = 928

 Score = 78.6 bits (192), Expect = 6e-13
 Identities = 62/205 (30%), Positives = 91/205 (44%), Gaps = 28/205 (13%)
 Frame = +2

Query: 29   PYTISNLKSLLTLNLQRCHGIVGLPTCFRKMKQLRHILLPKLPVASLSGRIMRQINRSTV 208
            P +I NLK L TL+L   +  V +P     M++LRH+ LP+              +    
Sbjct: 644  PNSIGNLKCLQTLDLLTGNSTVQIPNVIGNMEKLRHLYLPE--------------SCGNG 689

Query: 209  FRKLDEISLPNLQTLIGCNDDVLKAKGFSKVTRLQKLGID-------------------- 328
              K    +L NLQTL+    +    K   K+T L+KL ID                    
Sbjct: 690  IEKWQLSNLKNLQTLVNFPAEKCDVKDLMKLTSLRKLVIDDPNYGDIFKSTNVTFNHLES 749

Query: 329  --HFTEYDLSL------CKNVSKMQLRYPWGNLPETNKFPPNLTELTLTRTVLKEDSMET 484
              + +  D+S+      C N+ K+ +  P  NLP+ N+    L +L L  + L  D M T
Sbjct: 750  LFYVSSEDISILEVSAGCPNLYKLHIEGPISNLPQPNQISSKLAKLKLQGSGLVADPMTT 809

Query: 485  LGKLSNLKTLILGPNSYAGARMVCS 559
            L KL NL+ L L  +S+ G +MVCS
Sbjct: 810  LEKLPNLRLLELQLDSFLGKQMVCS 834


>ref|NP_176187.1| NB-ARC domain-containing disease resistance protein [Arabidopsis
            thaliana] gi|29839689|sp|Q9XIF0.1|DRL13_ARATH RecName:
            Full=Putative disease resistance protein At1g59780
            gi|5080812|gb|AAD39321.1|AC007258_10 Putative disease
            resistance protein [Arabidopsis thaliana]
            gi|332195496|gb|AEE33617.1| NB-ARC domain-containing
            disease resistance protein [Arabidopsis thaliana]
          Length = 906

 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 61/190 (32%), Positives = 100/190 (52%), Gaps = 13/190 (6%)
 Frame = +2

Query: 29   PYTISNLKSLLTLNLQRCHG-IVGLPTCFRKMKQLRHILLP-------KLPVASLSGRIM 184
            P ++ NLKSLL LNL+   G ++ +P  F++M +LR++ LP       KL + +L  ++ 
Sbjct: 614  PSSLRNLKSLLYLNLRINSGQLINVPNVFKEMLELRYLSLPWERSSLTKLELGNLL-KLE 672

Query: 185  RQINRSTVFRKLDEIS-LPNLQTLIGCNDDVLKAKGFSKVTRLQKLGIDHFTEYDLSLCK 361
              IN ST    + ++  +  L+TL      ++  +G    T    L +    E DL++  
Sbjct: 673  TLINFSTKDSSVTDLHRMTKLRTL----QILISGEGLHMETLSSALSMLGHLE-DLTVTP 727

Query: 362  NVSKMQLRYPW----GNLPETNKFPPNLTELTLTRTVLKEDSMETLGKLSNLKTLILGPN 529
            + + +Q ++P       LP+   FP +LT ++L    L+ED M TL KL  LK + L  N
Sbjct: 728  SENSVQFKHPKLIYRPMLPDVQHFPSHLTTISLVYCFLEEDPMPTLEKLLQLKVVSLWYN 787

Query: 530  SYAGARMVCS 559
            +Y G RMVC+
Sbjct: 788  AYVGRRMVCT 797


>ref|XP_002521786.1| Disease resistance protein RPP13, putative [Ricinus communis]
            gi|223538999|gb|EEF40596.1| Disease resistance protein
            RPP13, putative [Ricinus communis]
          Length = 929

 Score = 72.0 bits (175), Expect = 6e-11
 Identities = 62/193 (32%), Positives = 96/193 (49%), Gaps = 16/193 (8%)
 Frame = +2

Query: 29   PYTISNLKSLLTLNLQRCHGIVGLPTCFRKMKQLRHILLP--------KLPVASLSGRIM 184
            P  I NL+ L TL+L   +  V +P    KM++LRH+ LP        +  +A+LS  + 
Sbjct: 645  PLAIGNLRYLQTLDLLTWNSTVRIPNVICKMQRLRHLYLPESCGDDSDRWQLANLSN-LQ 703

Query: 185  RQINRSTVFRKL-DEISLPNLQTLIGCNDD---VLKAKGFSKVTRLQKLGIDHFTEYDL- 349
              +N       + D +SL NL+ L+  + +   + ++ G S    L+ L      +Y L 
Sbjct: 704  TLVNFPAEKCDIRDLLSLTNLRKLVIDDPNFGLIFRSPGTS-FNHLESLSFVSNEDYTLV 762

Query: 350  ---SLCKNVSKMQLRYPWGNLPETNKFPPNLTELTLTRTVLKEDSMETLGKLSNLKTLIL 520
               + C N+ K+ +      LPE ++F  NL +L L  + L ED M TL KL NL+ L L
Sbjct: 763  QIITGCPNLYKLHIEGQIEKLPECHQFSSNLAKLNLQGSKLLEDPMMTLEKLPNLRILRL 822

Query: 521  GPNSYAGARMVCS 559
              +S+ G  MVCS
Sbjct: 823  QMDSFLGTLMVCS 835


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