BLASTX nr result

ID: Panax21_contig00025417 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00025417
         (440 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274217.1| PREDICTED: uncharacterized protein LOC100258...   118   6e-25
ref|XP_002313489.1| predicted protein [Populus trichocarpa] gi|1...   106   2e-21
gb|AFK41233.1| unknown [Lotus japonicus]                              102   3e-20
gb|AFK40698.1| unknown [Lotus japonicus]                              102   3e-20
ref|XP_002523833.1| conserved hypothetical protein [Ricinus comm...   101   5e-20

>ref|XP_002274217.1| PREDICTED: uncharacterized protein LOC100258720 [Vitis vinifera]
           gi|147828169|emb|CAN68427.1| hypothetical protein
           VITISV_031997 [Vitis vinifera]
           gi|296084887|emb|CBI28296.3| unnamed protein product
           [Vitis vinifera]
          Length = 172

 Score =  118 bits (295), Expect = 6e-25
 Identities = 60/103 (58%), Positives = 70/103 (67%)
 Frame = -1

Query: 440 FKTELPSDIKIRTSTPSFNCLARLLGAPQQFYTTNNNMFSNVVKAHDDDSYTISNPLNFY 261
           FKT LPSD +  TS+P  NCLA+LLG P Q Y    N  S +VKA DD SYTIS PL+F 
Sbjct: 68  FKTNLPSDTQ--TSSPPLNCLAKLLGGPNQLYAFRKNTVSKIVKARDDSSYTISTPLSFS 125

Query: 260 TSCPNLSQKDGKCGAKNSGIGSSKTVDLPLPREWGLPPTSYYV 132
           T+CP+  +     GAK    GSSKTVDLPLP EWGL P+SYY+
Sbjct: 126 TTCPSSVK-----GAKYGEFGSSKTVDLPLPPEWGLAPSSYYI 163


>ref|XP_002313489.1| predicted protein [Populus trichocarpa] gi|118488493|gb|ABK96060.1|
           unknown [Populus trichocarpa]
           gi|222849897|gb|EEE87444.1| predicted protein [Populus
           trichocarpa]
          Length = 173

 Score =  106 bits (264), Expect = 2e-21
 Identities = 55/103 (53%), Positives = 66/103 (64%)
 Frame = -1

Query: 440 FKTELPSDIKIRTSTPSFNCLARLLGAPQQFYTTNNNMFSNVVKAHDDDSYTISNPLNFY 261
           F+ +LP      T+     CLA+LLG P Q Y +  NM S +V+ HD +SYTIS PL F 
Sbjct: 68  FEVKLPPGTS--TAATPLICLAKLLGGPSQLYVSRQNMVSKIVQTHDSNSYTISTPLAFS 125

Query: 260 TSCPNLSQKDGKCGAKNSGIGSSKTVDLPLPREWGLPPTSYYV 132
           ++C   S   GKCG  N   GSSKTVDLPLPREWGL P+SYYV
Sbjct: 126 STC---SAGGGKCGVSNQ-FGSSKTVDLPLPREWGLAPSSYYV 164


>gb|AFK41233.1| unknown [Lotus japonicus]
          Length = 172

 Score =  102 bits (254), Expect = 3e-20
 Identities = 54/103 (52%), Positives = 69/103 (66%)
 Frame = -1

Query: 440 FKTELPSDIKIRTSTPSFNCLARLLGAPQQFYTTNNNMFSNVVKAHDDDSYTISNPLNFY 261
           FK +LPSD K + S+   NCLA+L+G P Q Y T  N  S ++K+ + +SYTIS PL+F 
Sbjct: 68  FKVDLPSD-KTKPSSAG-NCLAKLVGGPVQLYATRQNQVSQIIKSQEPNSYTISTPLSFM 125

Query: 260 TSCPNLSQKDGKCGAKNSGIGSSKTVDLPLPREWGLPPTSYYV 132
            SCP    ++  C A    +GSSKTVDLPLP EWGL P+SYYV
Sbjct: 126 KSCP----QNTNCKAAKP-VGSSKTVDLPLPPEWGLAPSSYYV 163


>gb|AFK40698.1| unknown [Lotus japonicus]
          Length = 172

 Score =  102 bits (254), Expect = 3e-20
 Identities = 54/103 (52%), Positives = 69/103 (66%)
 Frame = -1

Query: 440 FKTELPSDIKIRTSTPSFNCLARLLGAPQQFYTTNNNMFSNVVKAHDDDSYTISNPLNFY 261
           FK +LPSD K + S+   NCLA+L+G P Q Y T  N  S ++K+ + +SYTIS PL+F 
Sbjct: 68  FKVDLPSD-KTKPSSAG-NCLAKLVGGPVQLYATRQNQVSQIIKSQEPNSYTISTPLSFM 125

Query: 260 TSCPNLSQKDGKCGAKNSGIGSSKTVDLPLPREWGLPPTSYYV 132
            SCP    ++  C A    +GSSKTVDLPLP EWGL P+SYYV
Sbjct: 126 KSCP----QNTNCKAAKP-VGSSKTVDLPLPPEWGLAPSSYYV 163


>ref|XP_002523833.1| conserved hypothetical protein [Ricinus communis]
           gi|223536921|gb|EEF38559.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 169

 Score =  101 bits (252), Expect = 5e-20
 Identities = 55/103 (53%), Positives = 62/103 (60%)
 Frame = -1

Query: 440 FKTELPSDIKIRTSTPSFNCLARLLGAPQQFYTTNNNMFSNVVKAHDDDSYTISNPLNFY 261
           F+ ELPS    +  TP  NCLA+L+G   Q Y T  NM S +VK  D  SYTIS PL F 
Sbjct: 68  FEVELPSG-NSKAETP-LNCLAKLIGGTSQIYATRKNMVSRIVKTKDSSSYTISTPLAFS 125

Query: 260 TSCPNLSQKDGKCGAKNSGIGSSKTVDLPLPREWGLPPTSYYV 132
           T+ P         G    GIG SKTVDLPLPREWGL P+SYYV
Sbjct: 126 TAFPE--------GQLKGGIGESKTVDLPLPREWGLAPSSYYV 160


Top