BLASTX nr result
ID: Panax21_contig00025404
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax21_contig00025404
(1041 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002279863.2| PREDICTED: putative E3 ubiquitin-protein lig... 486 e-135
emb|CBI19874.3| unnamed protein product [Vitis vinifera] 486 e-135
emb|CAN74785.1| hypothetical protein VITISV_011516 [Vitis vinifera] 485 e-135
ref|XP_002510542.1| hypothetical protein RCOM_1598060 [Ricinus c... 481 e-134
ref|XP_002300701.1| predicted protein [Populus trichocarpa] gi|2... 466 e-129
>ref|XP_002279863.2| PREDICTED: putative E3 ubiquitin-protein ligase LIN-1-like [Vitis
vinifera]
Length = 1494
Score = 486 bits (1252), Expect = e-135
Identities = 244/336 (72%), Positives = 271/336 (80%)
Frame = +1
Query: 1 LGVYAKCMYKTLRKLKRNSVMVNDILKTLMNLPSVNAAEMWSCAEGPELDSSMNGEVLAL 180
LG YAKCMYKTLRKLK+NSV+V+D+LK L+ LPSV+ E+W C E ELDS NG +L+L
Sbjct: 1159 LGAYAKCMYKTLRKLKKNSVVVSDMLKALIKLPSVDPTELWCCDEVVELDSCSNGGILSL 1218
Query: 181 LHIKGRVISSHSDGTIKVWDATKRVPRLIHEVREHTKAVTCLYVPSLRDKLYSGSLDKTI 360
L +K V+S HSDGTIKVWDA KR RLI EVREHTKAVTCLY S DKLYSGSLDKTI
Sbjct: 1219 LPLKSWVLSGHSDGTIKVWDAGKRDLRLIQEVREHTKAVTCLYASSSSDKLYSGSLDKTI 1278
Query: 361 RVWAIKQEEIHCVQVHDVKEAVLELIANNNVACFAPQGTGVKVYNWSGVPKHINFNKNVK 540
RVW +K EEIHCVQVHDVKEAV +L AN + ACF+ QGTGV VY+WSGVPKHINFNKNVK
Sbjct: 1279 RVWTVKPEEIHCVQVHDVKEAVYQLTANASFACFSSQGTGVNVYSWSGVPKHINFNKNVK 1338
Query: 541 CLAMIGDKLYCGCTAYSIQEVDLHKHTSTMFYSGARKLLGKQIIQSLHIHDGLLFAGGSS 720
L M D+LYCGCT YSIQEVDL K T+ FYSGARKLLGKQ I SL IHDGLL+AGGSS
Sbjct: 1339 SLDMAEDRLYCGCTGYSIQEVDLCKSTTNTFYSGARKLLGKQTIYSLRIHDGLLYAGGSS 1398
Query: 721 VDGVAGKVFSLSTKAVMASLTTGFDIHCITVNNDFIFTATRFGTIEVWLKERVTRVASIR 900
VDG AGKVFSLSTKA+ S TG DI + VN+DFIFTA++ G IEVW KE VTRVASI+
Sbjct: 1399 VDGTAGKVFSLSTKALTGSFLTGLDIQRLAVNSDFIFTASKSGIIEVWFKETVTRVASIK 1458
Query: 901 MGSGGNAKITSLTSDNDGEMLFAGSSDGKIQAWILD 1008
+G G+AKI SL SD DGEMLFAG DGKIQAW LD
Sbjct: 1459 IGGHGHAKIASLASDTDGEMLFAGFLDGKIQAWALD 1494
>emb|CBI19874.3| unnamed protein product [Vitis vinifera]
Length = 1510
Score = 486 bits (1252), Expect = e-135
Identities = 244/336 (72%), Positives = 271/336 (80%)
Frame = +1
Query: 1 LGVYAKCMYKTLRKLKRNSVMVNDILKTLMNLPSVNAAEMWSCAEGPELDSSMNGEVLAL 180
LG YAKCMYKTLRKLK+NSV+V+D+LK L+ LPSV+ E+W C E ELDS NG +L+L
Sbjct: 1175 LGAYAKCMYKTLRKLKKNSVVVSDMLKALIKLPSVDPTELWCCDEVVELDSCSNGGILSL 1234
Query: 181 LHIKGRVISSHSDGTIKVWDATKRVPRLIHEVREHTKAVTCLYVPSLRDKLYSGSLDKTI 360
L +K V+S HSDGTIKVWDA KR RLI EVREHTKAVTCLY S DKLYSGSLDKTI
Sbjct: 1235 LPLKSWVLSGHSDGTIKVWDAGKRDLRLIQEVREHTKAVTCLYASSSSDKLYSGSLDKTI 1294
Query: 361 RVWAIKQEEIHCVQVHDVKEAVLELIANNNVACFAPQGTGVKVYNWSGVPKHINFNKNVK 540
RVW +K EEIHCVQVHDVKEAV +L AN + ACF+ QGTGV VY+WSGVPKHINFNKNVK
Sbjct: 1295 RVWTVKPEEIHCVQVHDVKEAVYQLTANASFACFSSQGTGVNVYSWSGVPKHINFNKNVK 1354
Query: 541 CLAMIGDKLYCGCTAYSIQEVDLHKHTSTMFYSGARKLLGKQIIQSLHIHDGLLFAGGSS 720
L M D+LYCGCT YSIQEVDL K T+ FYSGARKLLGKQ I SL IHDGLL+AGGSS
Sbjct: 1355 SLDMAEDRLYCGCTGYSIQEVDLCKSTTNTFYSGARKLLGKQTIYSLRIHDGLLYAGGSS 1414
Query: 721 VDGVAGKVFSLSTKAVMASLTTGFDIHCITVNNDFIFTATRFGTIEVWLKERVTRVASIR 900
VDG AGKVFSLSTKA+ S TG DI + VN+DFIFTA++ G IEVW KE VTRVASI+
Sbjct: 1415 VDGTAGKVFSLSTKALTGSFLTGLDIQRLAVNSDFIFTASKSGIIEVWFKETVTRVASIK 1474
Query: 901 MGSGGNAKITSLTSDNDGEMLFAGSSDGKIQAWILD 1008
+G G+AKI SL SD DGEMLFAG DGKIQAW LD
Sbjct: 1475 IGGHGHAKIASLASDTDGEMLFAGFLDGKIQAWALD 1510
>emb|CAN74785.1| hypothetical protein VITISV_011516 [Vitis vinifera]
Length = 1494
Score = 485 bits (1248), Expect = e-135
Identities = 243/336 (72%), Positives = 269/336 (80%)
Frame = +1
Query: 1 LGVYAKCMYKTLRKLKRNSVMVNDILKTLMNLPSVNAAEMWSCAEGPELDSSMNGEVLAL 180
LG YAKCMYKTLRKLK+NSV+V+D+LK L+ LPSV+ E+W C E ELDS NG +L+L
Sbjct: 1159 LGAYAKCMYKTLRKLKKNSVVVSDMLKALIKLPSVDPTELWCCDEVVELDSCSNGGILSL 1218
Query: 181 LHIKGRVISSHSDGTIKVWDATKRVPRLIHEVREHTKAVTCLYVPSLRDKLYSGSLDKTI 360
L +K V+S HSDGTIKVWDA KR RLI EVREHTKAVTCLY S DKLYSGSLDKTI
Sbjct: 1219 LPLKSWVLSGHSDGTIKVWDAGKRDLRLIQEVREHTKAVTCLYASSSSDKLYSGSLDKTI 1278
Query: 361 RVWAIKQEEIHCVQVHDVKEAVLELIANNNVACFAPQGTGVKVYNWSGVPKHINFNKNVK 540
RVW +K EEIHCVQVHDVKEAV +L AN N ACF+ QGTGV VY+WSGVPKHINFNK VK
Sbjct: 1279 RVWTVKPEEIHCVQVHDVKEAVYQLTANANFACFSSQGTGVNVYSWSGVPKHINFNKYVK 1338
Query: 541 CLAMIGDKLYCGCTAYSIQEVDLHKHTSTMFYSGARKLLGKQIIQSLHIHDGLLFAGGSS 720
CL M D+LYCGCT YSIQEVDL K TS FYSGARKLLGKQ I SL IHDG L+AGGSS
Sbjct: 1339 CLDMAEDRLYCGCTGYSIQEVDLCKSTSNTFYSGARKLLGKQTIYSLRIHDGFLYAGGSS 1398
Query: 721 VDGVAGKVFSLSTKAVMASLTTGFDIHCITVNNDFIFTATRFGTIEVWLKERVTRVASIR 900
VDG AGKVFSLSTKA+ S TG DI + VN+DFIFTA + G IEVW KE VT+VASI+
Sbjct: 1399 VDGTAGKVFSLSTKALTGSFLTGLDIQRLAVNSDFIFTAGKSGIIEVWFKETVTKVASIK 1458
Query: 901 MGSGGNAKITSLTSDNDGEMLFAGSSDGKIQAWILD 1008
+G G+AKI SL SD DGEMLFAG DGKI+AW LD
Sbjct: 1459 IGGHGHAKIASLASDTDGEMLFAGFLDGKIRAWALD 1494
>ref|XP_002510542.1| hypothetical protein RCOM_1598060 [Ricinus communis]
gi|223551243|gb|EEF52729.1| hypothetical protein
RCOM_1598060 [Ricinus communis]
Length = 1427
Score = 481 bits (1239), Expect = e-134
Identities = 242/337 (71%), Positives = 273/337 (81%), Gaps = 4/337 (1%)
Frame = +1
Query: 10 YAKCMYKTLRKLKRNSVMVNDILKTLMNLPSVNAAEMWSCAEGPELDSSMNGEVLALLHI 189
YAKC+Y TLRK KR S ++ D+LK+LMNL SVNA ++W+C E EL+SS NGEVL+LLH+
Sbjct: 1091 YAKCIYTTLRKFKRTSPVIADVLKSLMNLASVNAVKLWNCTEVVELESSSNGEVLSLLHL 1150
Query: 190 KGRVISSHSDGTIKVWDATKRVPRLIHEVREHTKAVTCLYVPSLRDKLYSGSLDKTIRVW 369
+GRVISSHSDGTIKVWDA KRV RLI EVREHTKAVTC+ VPS DKLYSGSLDKTIRVW
Sbjct: 1151 RGRVISSHSDGTIKVWDAGKRVLRLIQEVREHTKAVTCICVPSFGDKLYSGSLDKTIRVW 1210
Query: 370 AIKQEEIHCVQVHDVKEAVLELIANNNVACFAPQGTGVK----VYNWSGVPKHINFNKNV 537
IK EEIHCVQVHDVKEAV L AN VACF QGTGVK +YNWSG+PKH+ FNKNV
Sbjct: 1211 VIKPEEIHCVQVHDVKEAVFGLTANAKVACFTSQGTGVKASAPIYNWSGIPKHVTFNKNV 1270
Query: 538 KCLAMIGDKLYCGCTAYSIQEVDLHKHTSTMFYSGARKLLGKQIIQSLHIHDGLLFAGGS 717
K LAM GDKL+CGC+ YSIQEVDL K TST FYSG RKLLGKQ I SLHI+D LLFAGGS
Sbjct: 1271 KSLAMTGDKLFCGCSGYSIQEVDLRKLTSTTFYSGTRKLLGKQNIYSLHINDDLLFAGGS 1330
Query: 718 SVDGVAGKVFSLSTKAVMASLTTGFDIHCITVNNDFIFTATRFGTIEVWLKERVTRVASI 897
+VDG AGKVFS S KAV S +TG DI I NN+FIFTAT+ IEVWLKE VT+VASI
Sbjct: 1331 AVDGAAGKVFSHSKKAVKGSFSTGLDISHIVGNNEFIFTATKCEVIEVWLKESVTKVASI 1390
Query: 898 RMGSGGNAKITSLTSDNDGEMLFAGSSDGKIQAWILD 1008
++ GG+AKITS+ D DG ML+ GSS+GKIQAW +D
Sbjct: 1391 KVNGGGHAKITSVALDVDGGMLYVGSSNGKIQAWAMD 1427
>ref|XP_002300701.1| predicted protein [Populus trichocarpa] gi|222842427|gb|EEE79974.1|
predicted protein [Populus trichocarpa]
Length = 1518
Score = 466 bits (1200), Expect = e-129
Identities = 236/346 (68%), Positives = 271/346 (78%), Gaps = 18/346 (5%)
Frame = +1
Query: 1 LGVYAKCMYKTLRKLKRNSVMVNDILKTLMNLPSVNAAEMWSCAEGPELDSSMNGEVLAL 180
LG YAKC+Y+TLRKLKR+S +V D+LK+LM + SVNA E+W+C E E+DS +NG++L+L
Sbjct: 1153 LGKYAKCIYRTLRKLKRSSPVVTDVLKSLMKMSSVNATELWNCTEVVEVDSCVNGKLLSL 1212
Query: 181 LHIKGRVISSHSDGTIKVWDATKRVPRLIHEVREHTKAVTCLYVPSLRDKLYSGSLDKTI 360
LH++GRVISSHSDGTIKVWDA KRV RLI EVREHTKAVTCLY+PS DKLYSGSLDKTI
Sbjct: 1213 LHLEGRVISSHSDGTIKVWDAGKRVLRLIQEVREHTKAVTCLYIPSSGDKLYSGSLDKTI 1272
Query: 361 RVWAIKQEEIHCVQVHDVKEAVLELIANNNVACFAPQGTGVK------------------ 486
RVWAIK EEI C+QVHDVKEAV EL AN+ VACF QG GVK
Sbjct: 1273 RVWAIKPEEIRCIQVHDVKEAVYELAANDKVACFVSQGPGVKASYTNYLTATGANLQSLA 1332
Query: 487 VYNWSGVPKHINFNKNVKCLAMIGDKLYCGCTAYSIQEVDLHKHTSTMFYSGARKLLGKQ 666
VY+WS VPKHINFN+ VKCLAM GD LYCG + YSIQEVDL K TST FYSG RK+LGKQ
Sbjct: 1333 VYSWSDVPKHINFNRTVKCLAMTGDILYCGASGYSIQEVDLSKFTSTTFYSGTRKMLGKQ 1392
Query: 667 IIQSLHIHDGLLFAGGSSVDGVAGKVFSLSTKAVMASLTTGFDIHCITVNNDFIFTATRF 846
I SLH+ DGLLFAGGS+VDG AGKVF ++KAV S TGFDI I+VN DFIFTATR
Sbjct: 1393 SIYSLHVQDGLLFAGGSAVDGTAGKVFCHTSKAVTGSFPTGFDILRISVNGDFIFTATRS 1452
Query: 847 GTIEVWLKERVTRVASIRMGSGGNAKITSLTSDNDGEMLFAGSSDG 984
GTIEVWL+ERVTRVASI +G GG+ ++T L SD DG ML+A + G
Sbjct: 1453 GTIEVWLRERVTRVASIEVGGGGHTRVTCLASDMDGGMLYADTGLG 1498