BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00025377
         (356 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI17913.3| unnamed protein product [Vitis vinifera]               81   8e-25
ref|XP_002263967.1| PREDICTED: DNA ligase 4-like [Vitis vinifera]      81   8e-25
ref|XP_002325262.1| predicted protein [Populus trichocarpa] gi|2...    72   2e-23
dbj|BAF03051.1| DNA ligase IV [Populus nigra]                          72   4e-23
ref|XP_003546435.1| PREDICTED: DNA ligase 4-like [Glycine max]         74   1e-21

>emb|CBI17913.3| unnamed protein product [Vitis vinifera]
          Length = 1163

 Score = 80.9 bits (198), Expect(2) = 8e-25
 Identities = 33/44 (75%), Positives = 39/44 (88%)
 Frame = -1

Query: 356 QLLNNLDRSEDSKTVDYYKKKYCPNDKWSRFHGCCIYFHLSIQS 225
           QLL+N+DRS++SKT+DYYK KYCP +KWSRFH CCI FH SIQS
Sbjct: 773 QLLSNVDRSDNSKTIDYYKNKYCPKEKWSRFHDCCICFHSSIQS 816



 Score = 57.8 bits (138), Expect(2) = 8e-25
 Identities = 28/47 (59%), Positives = 36/47 (76%)
 Frame = -3

Query: 141 NLDWKALLELAQRRMRLEVFMGGGKVCNSVSDATHLVVLCLRGSNVD 1
           N DW+ L +LA RRM+LEV MGGGKV N++S ATHLVV  + G ++D
Sbjct: 818 NSDWELLSKLALRRMKLEVSMGGGKVGNNLSQATHLVVFSVPGFDLD 864


>ref|XP_002263967.1| PREDICTED: DNA ligase 4-like [Vitis vinifera]
          Length = 1162

 Score = 80.9 bits (198), Expect(2) = 8e-25
 Identities = 33/44 (75%), Positives = 39/44 (88%)
 Frame = -1

Query: 356 QLLNNLDRSEDSKTVDYYKKKYCPNDKWSRFHGCCIYFHLSIQS 225
           QLL+N+DRS++SKT+DYYK KYCP +KWSRFH CCI FH SIQS
Sbjct: 772 QLLSNVDRSDNSKTIDYYKNKYCPKEKWSRFHDCCICFHSSIQS 815



 Score = 57.8 bits (138), Expect(2) = 8e-25
 Identities = 28/47 (59%), Positives = 36/47 (76%)
 Frame = -3

Query: 141 NLDWKALLELAQRRMRLEVFMGGGKVCNSVSDATHLVVLCLRGSNVD 1
           N DW+ L +LA RRM+LEV MGGGKV N++S ATHLVV  + G ++D
Sbjct: 817 NSDWELLSKLALRRMKLEVSMGGGKVGNNLSQATHLVVFSVPGFDLD 863


>ref|XP_002325262.1| predicted protein [Populus trichocarpa] gi|222866696|gb|EEF03827.1|
           predicted protein [Populus trichocarpa]
          Length = 1242

 Score = 72.0 bits (175), Expect(2) = 2e-23
 Identities = 28/47 (59%), Positives = 38/47 (80%)
 Frame = -1

Query: 356 QLLNNLDRSEDSKTVDYYKKKYCPNDKWSRFHGCCIYFHLSIQS*DP 216
           QLL+N++ SED+K +D  K+KYCP +KWS FHGCC+YFH+S +S  P
Sbjct: 781 QLLSNINASEDAKAIDDLKQKYCPEEKWSLFHGCCVYFHISRESLTP 827



 Score = 62.0 bits (149), Expect(2) = 2e-23
 Identities = 28/45 (62%), Positives = 38/45 (84%)
 Frame = -3

Query: 135 DWKALLELAQRRMRLEVFMGGGKVCNSVSDATHLVVLCLRGSNVD 1
           DW++LL LA RR++LE+FMGGGKV N+++ ATHLVVL +  S+VD
Sbjct: 828 DWESLLGLAFRRLKLEIFMGGGKVSNNIAHATHLVVLIVPASDVD 872


>dbj|BAF03051.1| DNA ligase IV [Populus nigra]
          Length = 1319

 Score = 71.6 bits (174), Expect(2) = 4e-23
 Identities = 28/47 (59%), Positives = 37/47 (78%)
 Frame = -1

Query: 356 QLLNNLDRSEDSKTVDYYKKKYCPNDKWSRFHGCCIYFHLSIQS*DP 216
           QLL+N++ SED K +D  K+KYCP +KWS FHGCC+YFH+S +S  P
Sbjct: 781 QLLSNINASEDGKAIDDLKQKYCPEEKWSLFHGCCVYFHISRESLTP 827



 Score = 61.2 bits (147), Expect(2) = 4e-23
 Identities = 28/45 (62%), Positives = 38/45 (84%)
 Frame = -3

Query: 135 DWKALLELAQRRMRLEVFMGGGKVCNSVSDATHLVVLCLRGSNVD 1
           DW++LL LA RR++LE+FMGGGKV N+++ ATHLVVL +  S+VD
Sbjct: 828 DWESLLGLAFRRLKLEIFMGGGKVSNNIAHATHLVVLNVPASDVD 872


>ref|XP_003546435.1| PREDICTED: DNA ligase 4-like [Glycine max]
          Length = 1171

 Score = 74.3 bits (181), Expect(2) = 1e-21
 Identities = 31/44 (70%), Positives = 37/44 (84%)
 Frame = -1

Query: 356 QLLNNLDRSEDSKTVDYYKKKYCPNDKWSRFHGCCIYFHLSIQS 225
           QLL+N+DRSED  TVD+Y+KKYCP DKWS F+GC IYFH +I S
Sbjct: 772 QLLSNIDRSEDVSTVDHYRKKYCPKDKWSFFYGCSIYFHSAIPS 815



 Score = 53.9 bits (128), Expect(2) = 1e-21
 Identities = 25/45 (55%), Positives = 34/45 (75%)
 Frame = -3

Query: 135 DWKALLELAQRRMRLEVFMGGGKVCNSVSDATHLVVLCLRGSNVD 1
           DW  +L+LA RR++LEV MGGGKV ++++ ATHLVVL + G   D
Sbjct: 819 DWHFILQLAVRRLKLEVLMGGGKVTSNLTCATHLVVLLVPGYQTD 863