BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00025376
         (383 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI17913.3| unnamed protein product [Vitis vinifera]              152   2e-35
ref|XP_002263967.1| PREDICTED: DNA ligase 4-like [Vitis vinifera]     152   2e-35
ref|XP_002325262.1| predicted protein [Populus trichocarpa] gi|2...   143   2e-32
dbj|BAF03051.1| DNA ligase IV [Populus nigra]                         142   2e-32
ref|XP_003595076.1| DNA ligase [Medicago truncatula] gi|35548412...   135   3e-30

>emb|CBI17913.3| unnamed protein product [Vitis vinifera]
          Length = 1163

 Score =  152 bits (385), Expect = 2e-35
 Identities = 73/113 (64%), Positives = 83/113 (73%), Gaps = 2/113 (1%)
 Frame = -1

Query: 383  KGIKFQA--VRGDIIHYSWIFDCCSQXXXXXXXXKYFLHXXXXXXXXXKEEIDDFSDSYY 210
            KGIK+QA  +RGDIIH SW+FDCCSQ        KYFL          +EEID FSDSYY
Sbjct: 704  KGIKYQAAKLRGDIIHCSWVFDCCSQKKLLPLQPKYFLFLSEHSKKKLQEEIDKFSDSYY 763

Query: 209  WDLDIVDFKQLLNNIDRSEDSKTVDYYKKKYCPNDKWSRFHGCCIYFHLSIQS 51
             DLDI D KQLL+N+DRS++SKT+DYYK KYCP +KWSRFH CCI FH SIQS
Sbjct: 764  QDLDISDIKQLLSNVDRSDNSKTIDYYKNKYCPKEKWSRFHDCCICFHSSIQS 816


>ref|XP_002263967.1| PREDICTED: DNA ligase 4-like [Vitis vinifera]
          Length = 1162

 Score =  152 bits (385), Expect = 2e-35
 Identities = 73/113 (64%), Positives = 83/113 (73%), Gaps = 2/113 (1%)
 Frame = -1

Query: 383  KGIKFQA--VRGDIIHYSWIFDCCSQXXXXXXXXKYFLHXXXXXXXXXKEEIDDFSDSYY 210
            KGIK+QA  +RGDIIH SW+FDCCSQ        KYFL          +EEID FSDSYY
Sbjct: 703  KGIKYQAAKLRGDIIHCSWVFDCCSQKKLLPLQPKYFLFLSEHSKKKLQEEIDKFSDSYY 762

Query: 209  WDLDIVDFKQLLNNIDRSEDSKTVDYYKKKYCPNDKWSRFHGCCIYFHLSIQS 51
             DLDI D KQLL+N+DRS++SKT+DYYK KYCP +KWSRFH CCI FH SIQS
Sbjct: 763  QDLDISDIKQLLSNVDRSDNSKTIDYYKNKYCPKEKWSRFHDCCICFHSSIQS 815


>ref|XP_002325262.1| predicted protein [Populus trichocarpa] gi|222866696|gb|EEF03827.1|
            predicted protein [Populus trichocarpa]
          Length = 1242

 Score =  143 bits (360), Expect = 2e-32
 Identities = 66/116 (56%), Positives = 80/116 (68%), Gaps = 2/116 (1%)
 Frame = -1

Query: 383  KGIKFQAVR--GDIIHYSWIFDCCSQXXXXXXXXKYFLHXXXXXXXXXKEEIDDFSDSYY 210
            KGIK+QA +  GDIIHYSW+ DCC Q        K FL           EEID+FSDSYY
Sbjct: 712  KGIKYQAAKLHGDIIHYSWVLDCCLQKKLLPLQPKSFLFLSDGSKKKLHEEIDEFSDSYY 771

Query: 209  WDLDIVDFKQLLNNIDRSEDSKTVDYYKKKYCPNDKWSRFHGCCIYFHLSIQS*DP 42
            WDLD+ D KQLL+NI+ SED+K +D  K+KYCP +KWS FHGCC+YFH+S +S  P
Sbjct: 772  WDLDLSDIKQLLSNINASEDAKAIDDLKQKYCPEEKWSLFHGCCVYFHISRESLTP 827


>dbj|BAF03051.1| DNA ligase IV [Populus nigra]
          Length = 1319

 Score =  142 bits (359), Expect = 2e-32
 Identities = 66/116 (56%), Positives = 79/116 (68%), Gaps = 2/116 (1%)
 Frame = -1

Query: 383  KGIKFQAVR--GDIIHYSWIFDCCSQXXXXXXXXKYFLHXXXXXXXXXKEEIDDFSDSYY 210
            KGIK+QA +  GDIIHYSW+ DCC Q        K FL           EEID+FSDSYY
Sbjct: 712  KGIKYQAAKLHGDIIHYSWVLDCCLQKKLLPLQPKSFLFLSDGSKKKLHEEIDEFSDSYY 771

Query: 209  WDLDIVDFKQLLNNIDRSEDSKTVDYYKKKYCPNDKWSRFHGCCIYFHLSIQS*DP 42
            WDLD+ D KQLL+NI+ SED K +D  K+KYCP +KWS FHGCC+YFH+S +S  P
Sbjct: 772  WDLDLSDIKQLLSNINASEDGKAIDDLKQKYCPEEKWSLFHGCCVYFHISRESLTP 827


>ref|XP_003595076.1| DNA ligase [Medicago truncatula] gi|355484124|gb|AES65327.1| DNA
            ligase [Medicago truncatula]
          Length = 1244

 Score =  135 bits (341), Expect = 3e-30
 Identities = 64/113 (56%), Positives = 79/113 (69%), Gaps = 2/113 (1%)
 Frame = -1

Query: 383  KGIKFQAV--RGDIIHYSWIFDCCSQXXXXXXXXKYFLHXXXXXXXXXKEEIDDFSDSYY 210
            KG KF+A   RGDIIHY+W+ DCC+Q        KYFL          +E+ID+FSDSYY
Sbjct: 717  KGFKFEAAKRRGDIIHYTWVLDCCAQKKLIPLHLKYFLFLSELTKKKLQEDIDEFSDSYY 776

Query: 209  WDLDIVDFKQLLNNIDRSEDSKTVDYYKKKYCPNDKWSRFHGCCIYFHLSIQS 51
             DLD+ D KQLL+NI+RSED  TVD+Y+KKYCP DKWS F+GC IYF  ++ S
Sbjct: 777  LDLDLGDIKQLLSNINRSEDVSTVDHYRKKYCPKDKWSIFNGCSIYFRTTMPS 829