BLASTX nr result

ID: Panax21_contig00025361 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00025361
         (861 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268449.2| PREDICTED: protein YIF1B [Vitis vinifera]         302   6e-80
emb|CBI36691.3| unnamed protein product [Vitis vinifera]              302   6e-80
gb|AFK38884.1| unknown [Lotus japonicus]                              299   5e-79
ref|NP_001242205.1| uncharacterized protein LOC100799056 [Glycin...   297   2e-78
ref|XP_003555074.1| PREDICTED: protein YIF1B-A-like [Glycine max]     297   2e-78

>ref|XP_002268449.2| PREDICTED: protein YIF1B [Vitis vinifera]
          Length = 348

 Score =  302 bits (774), Expect = 6e-80
 Identities = 142/180 (78%), Positives = 156/180 (86%)
 Frame = -3

Query: 859 LHRGHWTRITELVGGRLSYKPPVNDINAPDLYIPFMVFGTYIVLAGFSMGLHGMFTAGTL 680
           LHRGHWTRITE VGGRLSYKPP+ DINAPDLYIPFM FGTY++LAG S+GL G FT   L
Sbjct: 167 LHRGHWTRITEPVGGRLSYKPPIYDINAPDLYIPFMAFGTYVILAGLSLGLRGKFTPEAL 226

Query: 679 NLLFMRGLVGWFLQIFLLKMTLLSLGSGEAPFLDIVAYAGYTFTGMCLAVLGRIIWRHSY 500
           N LF++GLVGW LQ+ LLK++LLSLGSGEAP LDIVAYAGYTFTGMCLAV GRI W +SY
Sbjct: 227 NWLFIKGLVGWCLQVSLLKVSLLSLGSGEAPLLDIVAYAGYTFTGMCLAVFGRIAWSYSY 286

Query: 499 YFLMPWTCLCMGIFLVKTMKRVLFAEVRSQGSSKHHFRLLFIAFAQFPLYI*LGNIGLHW 320
           YFLMPW CLCMGIFLVKTMKRVLFAEVRS  SS+HH+ LLFIA AQ PL+I LGNI +HW
Sbjct: 287 YFLMPWACLCMGIFLVKTMKRVLFAEVRSYDSSRHHYLLLFIALAQLPLFIWLGNISVHW 346


>emb|CBI36691.3| unnamed protein product [Vitis vinifera]
          Length = 337

 Score =  302 bits (774), Expect = 6e-80
 Identities = 142/180 (78%), Positives = 156/180 (86%)
 Frame = -3

Query: 859 LHRGHWTRITELVGGRLSYKPPVNDINAPDLYIPFMVFGTYIVLAGFSMGLHGMFTAGTL 680
           LHRGHWTRITE VGGRLSYKPP+ DINAPDLYIPFM FGTY++LAG S+GL G FT   L
Sbjct: 156 LHRGHWTRITEPVGGRLSYKPPIYDINAPDLYIPFMAFGTYVILAGLSLGLRGKFTPEAL 215

Query: 679 NLLFMRGLVGWFLQIFLLKMTLLSLGSGEAPFLDIVAYAGYTFTGMCLAVLGRIIWRHSY 500
           N LF++GLVGW LQ+ LLK++LLSLGSGEAP LDIVAYAGYTFTGMCLAV GRI W +SY
Sbjct: 216 NWLFIKGLVGWCLQVSLLKVSLLSLGSGEAPLLDIVAYAGYTFTGMCLAVFGRIAWSYSY 275

Query: 499 YFLMPWTCLCMGIFLVKTMKRVLFAEVRSQGSSKHHFRLLFIAFAQFPLYI*LGNIGLHW 320
           YFLMPW CLCMGIFLVKTMKRVLFAEVRS  SS+HH+ LLFIA AQ PL+I LGNI +HW
Sbjct: 276 YFLMPWACLCMGIFLVKTMKRVLFAEVRSYDSSRHHYLLLFIALAQLPLFIWLGNISVHW 335


>gb|AFK38884.1| unknown [Lotus japonicus]
          Length = 269

 Score =  299 bits (766), Expect = 5e-79
 Identities = 141/182 (77%), Positives = 158/182 (86%)
 Frame = -3

Query: 859 LHRGHWTRITELVGGRLSYKPPVNDINAPDLYIPFMVFGTYIVLAGFSMGLHGMFTAGTL 680
           LHRGHWTRITE VGGRLSYKPP+ DINAPDLYIP M FGTY+VLAG S+GLHG F+   L
Sbjct: 88  LHRGHWTRITEPVGGRLSYKPPIYDINAPDLYIPLMAFGTYVVLAGLSLGLHGKFSPEAL 147

Query: 679 NLLFMRGLVGWFLQIFLLKMTLLSLGSGEAPFLDIVAYAGYTFTGMCLAVLGRIIWRHSY 500
           NLLF++GL+GWF+Q  LLKMTLLSLGSGEAP LDI+AYAGYTFTG+CLAVLGRII  +SY
Sbjct: 148 NLLFIKGLLGWFMQASLLKMTLLSLGSGEAPLLDIIAYAGYTFTGICLAVLGRIILGYSY 207

Query: 499 YFLMPWTCLCMGIFLVKTMKRVLFAEVRSQGSSKHHFRLLFIAFAQFPLYI*LGNIGLHW 320
           YFLMPWTCLCM +FLVKTMKRVLFAEVR+  SSKHH+ LLFIA  QFPL+  LGNI ++W
Sbjct: 208 YFLMPWTCLCMAVFLVKTMKRVLFAEVRTYDSSKHHYLLLFIALVQFPLFTWLGNITVNW 267

Query: 319 FL 314
            L
Sbjct: 268 LL 269


>ref|NP_001242205.1| uncharacterized protein LOC100799056 [Glycine max]
           gi|255641178|gb|ACU20866.1| unknown [Glycine max]
          Length = 269

 Score =  297 bits (761), Expect = 2e-78
 Identities = 139/182 (76%), Positives = 158/182 (86%)
 Frame = -3

Query: 859 LHRGHWTRITELVGGRLSYKPPVNDINAPDLYIPFMVFGTYIVLAGFSMGLHGMFTAGTL 680
           LHRGHWTRITE VGGRLSYKPP+ DINAPDLYIP M FGTY++LAG S+GLHG F+   L
Sbjct: 88  LHRGHWTRITEPVGGRLSYKPPIYDINAPDLYIPLMAFGTYVILAGLSLGLHGKFSPEAL 147

Query: 679 NLLFMRGLVGWFLQIFLLKMTLLSLGSGEAPFLDIVAYAGYTFTGMCLAVLGRIIWRHSY 500
           NLLF++GL+GWF+Q  L K+TLLSLGSGEAP LDI+AYAGYTFTG+CLAVLGRII  +SY
Sbjct: 148 NLLFIKGLLGWFMQAALPKVTLLSLGSGEAPLLDIIAYAGYTFTGICLAVLGRIILGYSY 207

Query: 499 YFLMPWTCLCMGIFLVKTMKRVLFAEVRSQGSSKHHFRLLFIAFAQFPLYI*LGNIGLHW 320
           YFLMPWTCLCMG+FLVKTMKRVLFAEVRS  SS+HH+ LLFIA  QFPL+  LGNI ++W
Sbjct: 208 YFLMPWTCLCMGVFLVKTMKRVLFAEVRSYDSSRHHYLLLFIALVQFPLFTWLGNITINW 267

Query: 319 FL 314
            L
Sbjct: 268 LL 269


>ref|XP_003555074.1| PREDICTED: protein YIF1B-A-like [Glycine max]
          Length = 269

 Score =  297 bits (760), Expect = 2e-78
 Identities = 139/182 (76%), Positives = 158/182 (86%)
 Frame = -3

Query: 859 LHRGHWTRITELVGGRLSYKPPVNDINAPDLYIPFMVFGTYIVLAGFSMGLHGMFTAGTL 680
           LHRGHWTRITE VGGRLSYKPP+ DINAPDLYIP M FGTY++LAG S+GLH  F+   L
Sbjct: 88  LHRGHWTRITEPVGGRLSYKPPIYDINAPDLYIPLMAFGTYVILAGLSLGLHRKFSPEAL 147

Query: 679 NLLFMRGLVGWFLQIFLLKMTLLSLGSGEAPFLDIVAYAGYTFTGMCLAVLGRIIWRHSY 500
           NLLF++GL+GWF+Q  LLK+TLLSLGSGEAP LDI+AYAGYTFTG+CLAVLGRII  +SY
Sbjct: 148 NLLFIKGLLGWFMQAALLKVTLLSLGSGEAPLLDIIAYAGYTFTGICLAVLGRIILGYSY 207

Query: 499 YFLMPWTCLCMGIFLVKTMKRVLFAEVRSQGSSKHHFRLLFIAFAQFPLYI*LGNIGLHW 320
           YFLMPWTCLCMG+FLVKTMKRVLFAEVRS  SS+HH+ LLFIA  QFPL+  LGNI ++W
Sbjct: 208 YFLMPWTCLCMGVFLVKTMKRVLFAEVRSYDSSRHHYLLLFIALVQFPLFTWLGNITINW 267

Query: 319 FL 314
            L
Sbjct: 268 LL 269


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