BLASTX nr result

ID: Panax21_contig00025345 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00025345
         (566 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002301404.1| predicted protein [Populus trichocarpa] gi|2...   120   1e-25
ref|XP_002320194.1| predicted protein [Populus trichocarpa] gi|2...   117   2e-24
ref|XP_002277012.2| PREDICTED: uncharacterized protein LOC100256...   103   1e-20
emb|CBI40502.3| unnamed protein product [Vitis vinifera]              103   1e-20
emb|CAN64332.1| hypothetical protein VITISV_014668 [Vitis vinifera]   103   1e-20

>ref|XP_002301404.1| predicted protein [Populus trichocarpa] gi|222843130|gb|EEE80677.1|
           predicted protein [Populus trichocarpa]
          Length = 666

 Score =  120 bits (302), Expect = 1e-25
 Identities = 57/116 (49%), Positives = 77/116 (66%)
 Frame = +2

Query: 191 MACXXXXXXXXXXXXXPREILKEQGNLRRTFSGKDLCNQARIRRSHSDNHLCYSVNPIRA 370
           MAC              +++ KE   L R+ SGKD CN+A ++RS+SDNHLCYS+N +RA
Sbjct: 1   MACNSMAIPSSPATTAQKDVFKEHDGLFRSNSGKDYCNRATMQRSYSDNHLCYSINRVRA 60

Query: 371 SSTQPKLEGSHSVGPFKFHLPGSIVPKSLHSFLFEPETSKETNMEEDSVDCHESDE 538
            STQPKL+ S SVG F F +  SI+P SL SFLF+PETSK+ N+ +D ++   +DE
Sbjct: 61  ESTQPKLKSSRSVGIFPFQIASSIIPTSLRSFLFDPETSKDMNVAKDGIEISANDE 116


>ref|XP_002320194.1| predicted protein [Populus trichocarpa] gi|222860967|gb|EEE98509.1|
           predicted protein [Populus trichocarpa]
          Length = 691

 Score =  117 bits (292), Expect = 2e-24
 Identities = 55/93 (59%), Positives = 71/93 (76%)
 Frame = +2

Query: 242 REILKEQGNLRRTFSGKDLCNQARIRRSHSDNHLCYSVNPIRASSTQPKLEGSHSVGPFK 421
           ++  KE   L R+ SGKD CN+A +RRS+SDNHLCYSVN +RA+S+QPKL+ S SVG F 
Sbjct: 13  KDRFKEHNGLYRSNSGKDFCNRATMRRSYSDNHLCYSVNYVRAASSQPKLKSSRSVGIFP 72

Query: 422 FHLPGSIVPKSLHSFLFEPETSKETNMEEDSVD 520
           F +  SI+P SL SFLF+PETSK+ N+ +D VD
Sbjct: 73  FQISSSIIPASLRSFLFDPETSKDMNIAKDGVD 105


>ref|XP_002277012.2| PREDICTED: uncharacterized protein LOC100256908 [Vitis vinifera]
          Length = 655

 Score =  103 bits (258), Expect = 1e-20
 Identities = 54/99 (54%), Positives = 68/99 (68%), Gaps = 3/99 (3%)
 Frame = +2

Query: 266 NLRRTFSGKDLCNQARIRRSHSDNHLCYSVNPIRASSTQPKLEGSHS---VGPFKFHLPG 436
           +L R+ SGKDLC +A +RRS+SD HLCYS+N IRASS  PKL+ S S   + P  F LPG
Sbjct: 24  SLHRSHSGKDLCARAGLRRSYSDTHLCYSINRIRASSAHPKLKSSSSSVKIFPM-FQLPG 82

Query: 437 SIVPKSLHSFLFEPETSKETNMEEDSVDCHESDEDVEMN 553
           SI+P  L SFLF+PETSK+ N+ E+ VD    D +   N
Sbjct: 83  SILPSGLRSFLFDPETSKDMNIVENGVDIDNKDVEKRAN 121


>emb|CBI40502.3| unnamed protein product [Vitis vinifera]
          Length = 650

 Score =  103 bits (258), Expect = 1e-20
 Identities = 54/99 (54%), Positives = 68/99 (68%), Gaps = 3/99 (3%)
 Frame = +2

Query: 266 NLRRTFSGKDLCNQARIRRSHSDNHLCYSVNPIRASSTQPKLEGSHS---VGPFKFHLPG 436
           +L R+ SGKDLC +A +RRS+SD HLCYS+N IRASS  PKL+ S S   + P  F LPG
Sbjct: 24  SLHRSHSGKDLCARAGLRRSYSDTHLCYSINRIRASSAHPKLKSSSSSVKIFPM-FQLPG 82

Query: 437 SIVPKSLHSFLFEPETSKETNMEEDSVDCHESDEDVEMN 553
           SI+P  L SFLF+PETSK+ N+ E+ VD    D +   N
Sbjct: 83  SILPSGLRSFLFDPETSKDMNIVENGVDIDNKDVEKRAN 121


>emb|CAN64332.1| hypothetical protein VITISV_014668 [Vitis vinifera]
          Length = 681

 Score =  103 bits (258), Expect = 1e-20
 Identities = 54/99 (54%), Positives = 68/99 (68%), Gaps = 3/99 (3%)
 Frame = +2

Query: 266 NLRRTFSGKDLCNQARIRRSHSDNHLCYSVNPIRASSTQPKLEGSHS---VGPFKFHLPG 436
           +L R+ SGKDLC +A +RRS+SD HLCYS+N IRASS  PKL+ S S   + P  F LPG
Sbjct: 24  SLHRSHSGKDLCARAGLRRSYSDTHLCYSINRIRASSAHPKLKSSSSSVKIFPM-FQLPG 82

Query: 437 SIVPKSLHSFLFEPETSKETNMEEDSVDCHESDEDVEMN 553
           SI+P  L SFLF+PETSK+ N+ E+ VD    D +   N
Sbjct: 83  SILPSGLRSFLFDPETSKDMNIVENGVDIDNKDVEKRAN 121


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