BLASTX nr result

ID: Panax21_contig00025316 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00025316
         (541 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15531.3| unnamed protein product [Vitis vinifera]              306   2e-81
ref|XP_002281066.1| PREDICTED: pre-mRNA-splicing factor SPF27 ho...   306   2e-81
ref|XP_002322083.1| predicted protein [Populus trichocarpa] gi|2...   271   5e-71
ref|XP_004137495.1| PREDICTED: pre-mRNA-splicing factor SPF27 ho...   265   4e-69
ref|XP_003631066.1| Pre-mRNA-splicing factor SPF27-like protein ...   258   5e-67

>emb|CBI15531.3| unnamed protein product [Vitis vinifera]
          Length = 207

 Score =  306 bits (783), Expect = 2e-81
 Identities = 147/179 (82%), Positives = 159/179 (88%)
 Frame = +3

Query: 3   KDLPPVPTFNFKNHPMLAREFERVRASKPPVPLDMSRYGLEMPSMNKRNDETAWNQALQK 182
           KDLPP+P F F NHPMLARE+ERVRA KPPV LDMSRYGLEMP MNKRNDETAW  ALQK
Sbjct: 13  KDLPPLPPFGFHNHPMLAREYERVRAGKPPVALDMSRYGLEMPPMNKRNDETAWKHALQK 72

Query: 183 AQRLLQHQVIRLENLELMSKHGADVWKQHNQRLEVFLSRCQAEAAELNKQIEAVNRERKY 362
           AQRLLQHQVIRLENLELMSKHGADVWKQHNQRLE +LSR QA A E N++IE VNRERKY
Sbjct: 73  AQRLLQHQVIRLENLELMSKHGADVWKQHNQRLEAYLSRMQALAMEQNEKIETVNRERKY 132

Query: 363 HQQNTAYELNALSAQWKELCEKNIEIEAACAKIGSHIEELKKEATERGWNLGTNMENGS 539
           HQQNTA+ELNALSAQWKELCEKNIEI  ACAKI ++IEEL++EA ERGWNL  N++NGS
Sbjct: 133 HQQNTAFELNALSAQWKELCEKNIEIRTACAKIENNIEELRREAAERGWNLDANIDNGS 191


>ref|XP_002281066.1| PREDICTED: pre-mRNA-splicing factor SPF27 homolog [Vitis vinifera]
          Length = 256

 Score =  306 bits (783), Expect = 2e-81
 Identities = 147/179 (82%), Positives = 159/179 (88%)
 Frame = +3

Query: 3   KDLPPVPTFNFKNHPMLAREFERVRASKPPVPLDMSRYGLEMPSMNKRNDETAWNQALQK 182
           KDLPP+P F F NHPMLARE+ERVRA KPPV LDMSRYGLEMP MNKRNDETAW  ALQK
Sbjct: 62  KDLPPLPPFGFHNHPMLAREYERVRAGKPPVALDMSRYGLEMPPMNKRNDETAWKHALQK 121

Query: 183 AQRLLQHQVIRLENLELMSKHGADVWKQHNQRLEVFLSRCQAEAAELNKQIEAVNRERKY 362
           AQRLLQHQVIRLENLELMSKHGADVWKQHNQRLE +LSR QA A E N++IE VNRERKY
Sbjct: 122 AQRLLQHQVIRLENLELMSKHGADVWKQHNQRLEAYLSRMQALAMEQNEKIETVNRERKY 181

Query: 363 HQQNTAYELNALSAQWKELCEKNIEIEAACAKIGSHIEELKKEATERGWNLGTNMENGS 539
           HQQNTA+ELNALSAQWKELCEKNIEI  ACAKI ++IEEL++EA ERGWNL  N++NGS
Sbjct: 182 HQQNTAFELNALSAQWKELCEKNIEIRTACAKIENNIEELRREAAERGWNLDANIDNGS 240


>ref|XP_002322083.1| predicted protein [Populus trichocarpa] gi|222869079|gb|EEF06210.1|
           predicted protein [Populus trichocarpa]
          Length = 255

 Score =  271 bits (693), Expect = 5e-71
 Identities = 130/180 (72%), Positives = 155/180 (86%), Gaps = 1/180 (0%)
 Frame = +3

Query: 3   KDLPPVPTFNFKNHPMLAREFERVRASKPPVPLDMSRYG-LEMPSMNKRNDETAWNQALQ 179
           K+LPPVP F F+N+PMLA+E+ERVRA +PPV LD SRY  L++P+ NK NDETAW QALQ
Sbjct: 72  KELPPVPKFTFENYPMLAKEYERVRAGRPPVTLDFSRYSHLDLPAANKMNDETAWKQALQ 131

Query: 180 KAQRLLQHQVIRLENLELMSKHGADVWKQHNQRLEVFLSRCQAEAAELNKQIEAVNRERK 359
           +AQRLLQHQVIRLENLELMSK+G +VW QHN++LE  L+R Q  A E N++IEAVNRERK
Sbjct: 132 RAQRLLQHQVIRLENLELMSKYGPEVWIQHNRQLETMLTRTQKLAREQNEKIEAVNRERK 191

Query: 360 YHQQNTAYELNALSAQWKELCEKNIEIEAACAKIGSHIEELKKEATERGWNLGTNMENGS 539
           YHQQNTAYELNALSAQWKELC+KNIEI+ AC KI + IEELK+E++ERGWN+  N+ENGS
Sbjct: 192 YHQQNTAYELNALSAQWKELCQKNIEIQEACIKIENQIEELKRESSERGWNVEANIENGS 251


>ref|XP_004137495.1| PREDICTED: pre-mRNA-splicing factor SPF27 homolog [Cucumis sativus]
           gi|449503115|ref|XP_004161841.1| PREDICTED:
           pre-mRNA-splicing factor SPF27 homolog [Cucumis sativus]
          Length = 256

 Score =  265 bits (676), Expect = 4e-69
 Identities = 122/179 (68%), Positives = 150/179 (83%)
 Frame = +3

Query: 3   KDLPPVPTFNFKNHPMLAREFERVRASKPPVPLDMSRYGLEMPSMNKRNDETAWNQALQK 182
           KDLPP+P F F++HPMLARE+ERVRA +PPVPLD++RY LE P  NK+NDETAW Q LQK
Sbjct: 72  KDLPPLPKFKFEDHPMLAREYERVRAGRPPVPLDVARYKLETPPPNKKNDETAWKQTLQK 131

Query: 183 AQRLLQHQVIRLENLELMSKHGADVWKQHNQRLEVFLSRCQAEAAELNKQIEAVNRERKY 362
           AQ LL+HQV+RLENL+LMSK+G D+WKQHN++LE  LSR Q  A E N++IE VNRERK+
Sbjct: 132 AQCLLRHQVLRLENLDLMSKYGPDIWKQHNKQLEALLSRMQKLAQEQNEKIEKVNRERKF 191

Query: 363 HQQNTAYELNALSAQWKELCEKNIEIEAACAKIGSHIEELKKEATERGWNLGTNMENGS 539
           HQQN AYEL+ALS QWKELCEKN+EI+ AC ++   I+EL++EA E+GWNL  N+ENGS
Sbjct: 192 HQQNAAYELHALSTQWKELCEKNMEIQVACFQLEGQIQELRREAAEKGWNLEVNVENGS 250


>ref|XP_003631066.1| Pre-mRNA-splicing factor SPF27-like protein [Medicago truncatula]
           gi|355525088|gb|AET05542.1| Pre-mRNA-splicing factor
           SPF27-like protein [Medicago truncatula]
           gi|388502546|gb|AFK39339.1| unknown [Medicago
           truncatula]
          Length = 261

 Score =  258 bits (658), Expect = 5e-67
 Identities = 119/178 (66%), Positives = 143/178 (80%)
 Frame = +3

Query: 3   KDLPPVPTFNFKNHPMLAREFERVRASKPPVPLDMSRYGLEMPSMNKRNDETAWNQALQK 182
           KD PP+P+ NF ++PM+ RE+ERVRA +PPV LD SRY LE P +NKRNDETAW  A+Q+
Sbjct: 77  KDFPPLPSSNFHDYPMIGREYERVRAGRPPVSLDRSRYELEAPPVNKRNDETAWKLAIQR 136

Query: 183 AQRLLQHQVIRLENLELMSKHGADVWKQHNQRLEVFLSRCQAEAAELNKQIEAVNRERKY 362
           AQRLLQ+Q IR+ENL+L+ KHG D WKQHNQRLEV+LSR Q  A E N +IE VNRERKY
Sbjct: 137 AQRLLQYQTIRMENLDLLFKHGPDAWKQHNQRLEVYLSRMQKLAQEQNDKIEKVNRERKY 196

Query: 363 HQQNTAYELNALSAQWKELCEKNIEIEAACAKIGSHIEELKKEATERGWNLGTNMENG 536
           HQQNTAYELNALS QW ELC+KNI+I+  CA + +H+ EL++EA ERGWNL    ENG
Sbjct: 197 HQQNTAYELNALSMQWNELCQKNIDIKVVCASVETHLNELRREAAERGWNLDAITENG 254


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