BLASTX nr result
ID: Panax21_contig00025316
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00025316 (541 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI15531.3| unnamed protein product [Vitis vinifera] 306 2e-81 ref|XP_002281066.1| PREDICTED: pre-mRNA-splicing factor SPF27 ho... 306 2e-81 ref|XP_002322083.1| predicted protein [Populus trichocarpa] gi|2... 271 5e-71 ref|XP_004137495.1| PREDICTED: pre-mRNA-splicing factor SPF27 ho... 265 4e-69 ref|XP_003631066.1| Pre-mRNA-splicing factor SPF27-like protein ... 258 5e-67 >emb|CBI15531.3| unnamed protein product [Vitis vinifera] Length = 207 Score = 306 bits (783), Expect = 2e-81 Identities = 147/179 (82%), Positives = 159/179 (88%) Frame = +3 Query: 3 KDLPPVPTFNFKNHPMLAREFERVRASKPPVPLDMSRYGLEMPSMNKRNDETAWNQALQK 182 KDLPP+P F F NHPMLARE+ERVRA KPPV LDMSRYGLEMP MNKRNDETAW ALQK Sbjct: 13 KDLPPLPPFGFHNHPMLAREYERVRAGKPPVALDMSRYGLEMPPMNKRNDETAWKHALQK 72 Query: 183 AQRLLQHQVIRLENLELMSKHGADVWKQHNQRLEVFLSRCQAEAAELNKQIEAVNRERKY 362 AQRLLQHQVIRLENLELMSKHGADVWKQHNQRLE +LSR QA A E N++IE VNRERKY Sbjct: 73 AQRLLQHQVIRLENLELMSKHGADVWKQHNQRLEAYLSRMQALAMEQNEKIETVNRERKY 132 Query: 363 HQQNTAYELNALSAQWKELCEKNIEIEAACAKIGSHIEELKKEATERGWNLGTNMENGS 539 HQQNTA+ELNALSAQWKELCEKNIEI ACAKI ++IEEL++EA ERGWNL N++NGS Sbjct: 133 HQQNTAFELNALSAQWKELCEKNIEIRTACAKIENNIEELRREAAERGWNLDANIDNGS 191 >ref|XP_002281066.1| PREDICTED: pre-mRNA-splicing factor SPF27 homolog [Vitis vinifera] Length = 256 Score = 306 bits (783), Expect = 2e-81 Identities = 147/179 (82%), Positives = 159/179 (88%) Frame = +3 Query: 3 KDLPPVPTFNFKNHPMLAREFERVRASKPPVPLDMSRYGLEMPSMNKRNDETAWNQALQK 182 KDLPP+P F F NHPMLARE+ERVRA KPPV LDMSRYGLEMP MNKRNDETAW ALQK Sbjct: 62 KDLPPLPPFGFHNHPMLAREYERVRAGKPPVALDMSRYGLEMPPMNKRNDETAWKHALQK 121 Query: 183 AQRLLQHQVIRLENLELMSKHGADVWKQHNQRLEVFLSRCQAEAAELNKQIEAVNRERKY 362 AQRLLQHQVIRLENLELMSKHGADVWKQHNQRLE +LSR QA A E N++IE VNRERKY Sbjct: 122 AQRLLQHQVIRLENLELMSKHGADVWKQHNQRLEAYLSRMQALAMEQNEKIETVNRERKY 181 Query: 363 HQQNTAYELNALSAQWKELCEKNIEIEAACAKIGSHIEELKKEATERGWNLGTNMENGS 539 HQQNTA+ELNALSAQWKELCEKNIEI ACAKI ++IEEL++EA ERGWNL N++NGS Sbjct: 182 HQQNTAFELNALSAQWKELCEKNIEIRTACAKIENNIEELRREAAERGWNLDANIDNGS 240 >ref|XP_002322083.1| predicted protein [Populus trichocarpa] gi|222869079|gb|EEF06210.1| predicted protein [Populus trichocarpa] Length = 255 Score = 271 bits (693), Expect = 5e-71 Identities = 130/180 (72%), Positives = 155/180 (86%), Gaps = 1/180 (0%) Frame = +3 Query: 3 KDLPPVPTFNFKNHPMLAREFERVRASKPPVPLDMSRYG-LEMPSMNKRNDETAWNQALQ 179 K+LPPVP F F+N+PMLA+E+ERVRA +PPV LD SRY L++P+ NK NDETAW QALQ Sbjct: 72 KELPPVPKFTFENYPMLAKEYERVRAGRPPVTLDFSRYSHLDLPAANKMNDETAWKQALQ 131 Query: 180 KAQRLLQHQVIRLENLELMSKHGADVWKQHNQRLEVFLSRCQAEAAELNKQIEAVNRERK 359 +AQRLLQHQVIRLENLELMSK+G +VW QHN++LE L+R Q A E N++IEAVNRERK Sbjct: 132 RAQRLLQHQVIRLENLELMSKYGPEVWIQHNRQLETMLTRTQKLAREQNEKIEAVNRERK 191 Query: 360 YHQQNTAYELNALSAQWKELCEKNIEIEAACAKIGSHIEELKKEATERGWNLGTNMENGS 539 YHQQNTAYELNALSAQWKELC+KNIEI+ AC KI + IEELK+E++ERGWN+ N+ENGS Sbjct: 192 YHQQNTAYELNALSAQWKELCQKNIEIQEACIKIENQIEELKRESSERGWNVEANIENGS 251 >ref|XP_004137495.1| PREDICTED: pre-mRNA-splicing factor SPF27 homolog [Cucumis sativus] gi|449503115|ref|XP_004161841.1| PREDICTED: pre-mRNA-splicing factor SPF27 homolog [Cucumis sativus] Length = 256 Score = 265 bits (676), Expect = 4e-69 Identities = 122/179 (68%), Positives = 150/179 (83%) Frame = +3 Query: 3 KDLPPVPTFNFKNHPMLAREFERVRASKPPVPLDMSRYGLEMPSMNKRNDETAWNQALQK 182 KDLPP+P F F++HPMLARE+ERVRA +PPVPLD++RY LE P NK+NDETAW Q LQK Sbjct: 72 KDLPPLPKFKFEDHPMLAREYERVRAGRPPVPLDVARYKLETPPPNKKNDETAWKQTLQK 131 Query: 183 AQRLLQHQVIRLENLELMSKHGADVWKQHNQRLEVFLSRCQAEAAELNKQIEAVNRERKY 362 AQ LL+HQV+RLENL+LMSK+G D+WKQHN++LE LSR Q A E N++IE VNRERK+ Sbjct: 132 AQCLLRHQVLRLENLDLMSKYGPDIWKQHNKQLEALLSRMQKLAQEQNEKIEKVNRERKF 191 Query: 363 HQQNTAYELNALSAQWKELCEKNIEIEAACAKIGSHIEELKKEATERGWNLGTNMENGS 539 HQQN AYEL+ALS QWKELCEKN+EI+ AC ++ I+EL++EA E+GWNL N+ENGS Sbjct: 192 HQQNAAYELHALSTQWKELCEKNMEIQVACFQLEGQIQELRREAAEKGWNLEVNVENGS 250 >ref|XP_003631066.1| Pre-mRNA-splicing factor SPF27-like protein [Medicago truncatula] gi|355525088|gb|AET05542.1| Pre-mRNA-splicing factor SPF27-like protein [Medicago truncatula] gi|388502546|gb|AFK39339.1| unknown [Medicago truncatula] Length = 261 Score = 258 bits (658), Expect = 5e-67 Identities = 119/178 (66%), Positives = 143/178 (80%) Frame = +3 Query: 3 KDLPPVPTFNFKNHPMLAREFERVRASKPPVPLDMSRYGLEMPSMNKRNDETAWNQALQK 182 KD PP+P+ NF ++PM+ RE+ERVRA +PPV LD SRY LE P +NKRNDETAW A+Q+ Sbjct: 77 KDFPPLPSSNFHDYPMIGREYERVRAGRPPVSLDRSRYELEAPPVNKRNDETAWKLAIQR 136 Query: 183 AQRLLQHQVIRLENLELMSKHGADVWKQHNQRLEVFLSRCQAEAAELNKQIEAVNRERKY 362 AQRLLQ+Q IR+ENL+L+ KHG D WKQHNQRLEV+LSR Q A E N +IE VNRERKY Sbjct: 137 AQRLLQYQTIRMENLDLLFKHGPDAWKQHNQRLEVYLSRMQKLAQEQNDKIEKVNRERKY 196 Query: 363 HQQNTAYELNALSAQWKELCEKNIEIEAACAKIGSHIEELKKEATERGWNLGTNMENG 536 HQQNTAYELNALS QW ELC+KNI+I+ CA + +H+ EL++EA ERGWNL ENG Sbjct: 197 HQQNTAYELNALSMQWNELCQKNIDIKVVCASVETHLNELRREAAERGWNLDAITENG 254