BLASTX nr result

ID: Panax21_contig00025308 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00025308
         (825 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264328.2| PREDICTED: small RNA 2'-O-methyltransferase-...   237   3e-60
emb|CBI31031.3| unnamed protein product [Vitis vinifera]              226   4e-57
ref|XP_002300565.1| hypothetical protein POPTRDRAFT_177484 [Popu...   210   3e-52
ref|XP_002330552.1| hypothetical protein POPTRDRAFT_270173 [Popu...   205   1e-50
ref|XP_004171716.1| PREDICTED: LOW QUALITY PROTEIN: small RNA 2'...   194   2e-47

>ref|XP_002264328.2| PREDICTED: small RNA 2'-O-methyltransferase-like [Vitis vinifera]
          Length = 948

 Score =  237 bits (604), Expect = 3e-60
 Identities = 134/281 (47%), Positives = 176/281 (62%), Gaps = 7/281 (2%)
 Frame = +2

Query: 2    KLKVTESGEQET---NGGGPAVGAMGSVG---TFKCEVKIYSKTRELIMQCTPKESFKKQ 163
            +LKV ES  +ET   NG G       SVG   TF CE+KIYSK ++LI++ +PK+S++K 
Sbjct: 426  RLKVAESSAEETEYRNGAGVVPHGNESVGLGDTFMCEIKIYSKLQDLIIEYSPKDSYRKH 485

Query: 164  NDAIQDAALKILSWLNTFFKKLDLSIENLTVSGDELAIQIYPQYFSTEFVLCPSVHDHRQ 343
            +DA+Q+++L++L  LNT+FK+LD+ +E L  + D   I IYP+ F+  F  CPS+H+ RQ
Sbjct: 486  SDALQNSSLRVLLCLNTYFKELDMPLEKLASAAD---IHIYPEKFAKTFASCPSIHNLRQ 542

Query: 344  STRTRASRLLDSDCSSQLNVMSEDTVLSIN-NGHCSGVSSSTGSLVCISYNICLLADGDC 520
               T+  RLLDS+  +Q  +M    + S N  G  SG S S GSL CI+Y   L+A+G+ 
Sbjct: 543  RNETQRERLLDSNSINQPYIMPGHELYSFNIKGPDSGTSPSNGSLACINYVAFLVAEGEH 602

Query: 521  IXXXXXXXXXXXXXIGVRAVVPHLEAVVTQMSVGQSTCYTTELPPQELIMAAAGDXXXXX 700
            +             IGV AV+PHLE VVTQMSVGQS C+  +LPPQELI+AA GD     
Sbjct: 603  MKERVESNDEFEFEIGVGAVIPHLEVVVTQMSVGQSACFNMDLPPQELILAATGDPVKTI 662

Query: 701  XXXXXXXXXXXXXITLLSVMEPLEERMEQALFSPPLSKQRV 823
                         I LL V EPLE+RMEQALFSPPLSKQRV
Sbjct: 663  SLLSSKVCFLEYSIVLLRVTEPLEDRMEQALFSPPLSKQRV 703


>emb|CBI31031.3| unnamed protein product [Vitis vinifera]
          Length = 931

 Score =  226 bits (577), Expect = 4e-57
 Identities = 122/255 (47%), Positives = 164/255 (64%), Gaps = 1/255 (0%)
 Frame = +2

Query: 62   AMGSVGTFKCEVKIYSKTRELIMQCTPKESFKKQNDAIQDAALKILSWLNTFFKKLDLSI 241
            ++G   TF CE+KIYSK ++LI++ +PK+S++K +DA+Q+++L++L  LNT+FK+LD+ +
Sbjct: 420  SVGLGDTFMCEIKIYSKLQDLIIEYSPKDSYRKHSDALQNSSLRVLLCLNTYFKELDMPL 479

Query: 242  ENLTVSGDELAIQIYPQYFSTEFVLCPSVHDHRQSTRTRASRLLDSDCSSQLNVMSEDTV 421
            E L  + D   I IYP+ F+  F  CPS+H+ RQ   T+  RLLDS+  +Q  +M    +
Sbjct: 480  EKLASAAD---IHIYPEKFAKTFASCPSIHNLRQRNETQRERLLDSNSINQPYIMPGHEL 536

Query: 422  LSIN-NGHCSGVSSSTGSLVCISYNICLLADGDCIXXXXXXXXXXXXXIGVRAVVPHLEA 598
             S N  G  SG S S GSL CI+Y   L+A+G+ +             IGV AV+PHLE 
Sbjct: 537  YSFNIKGPDSGTSPSNGSLACINYVAFLVAEGEHMKERVESNDEFEFEIGVGAVIPHLEV 596

Query: 599  VVTQMSVGQSTCYTTELPPQELIMAAAGDXXXXXXXXXXXXXXXXXXITLLSVMEPLEER 778
            VVTQMSVGQS C+  +LPPQELI+AA GD                  I LL V EPLE+R
Sbjct: 597  VVTQMSVGQSACFNMDLPPQELILAATGDPVKTISLLSSKVCFLEYSIVLLRVTEPLEDR 656

Query: 779  MEQALFSPPLSKQRV 823
            MEQALFSPPLSKQRV
Sbjct: 657  MEQALFSPPLSKQRV 671


>ref|XP_002300565.1| hypothetical protein POPTRDRAFT_177484 [Populus trichocarpa]
            gi|222847823|gb|EEE85370.1| hypothetical protein
            POPTRDRAFT_177484 [Populus trichocarpa]
          Length = 926

 Score =  210 bits (535), Expect = 3e-52
 Identities = 126/281 (44%), Positives = 165/281 (58%), Gaps = 7/281 (2%)
 Frame = +2

Query: 2    KLKVTESGE---QETNGGGPAVGAMGSVG---TFKCEVKIYSKTRELIMQCTPKESFKKQ 163
            KLKVTE+ E   + TNGG        +VG   +F+C+VK++SK ++LI++C+PKE +KKQ
Sbjct: 425  KLKVTEAAELATEYTNGGSLNADDGETVGLESSFRCKVKVFSKGQDLIIECSPKEIYKKQ 484

Query: 164  NDAIQDAALKILSWLNTFFKKLDLSIENLTVSGDELAIQIYPQYFSTEFVLCPSVHDHRQ 343
             DAIQ A+LK+LSWLN +FK L + +E L  S D L I +  + F  EF LC S+H+ +Q
Sbjct: 485  TDAIQSASLKVLSWLNAYFKDLGMPLEKLKCSADALDISLSSENFLKEFALCQSLHNVQQ 544

Query: 344  STRTRASRLLDSDCSS-QLNVMSEDTVLSINNGHCSGVSSSTGSLVCISYNICLLADGDC 520
            S R + S+L +S  ++ +  +  +D  L    G  SGV  S GSL+CISY + L+ +G  
Sbjct: 545  S-RCQGSKLPESKSTNMEYTLSGQDVCLPNIEGSYSGVCPSNGSLLCISYTVSLVTEGGH 603

Query: 521  IXXXXXXXXXXXXXIGVRAVVPHLEAVVTQMSVGQSTCYTTELPPQELIMAAAGDXXXXX 700
                          IG   VV  LE VVTQMSVGQ   +   LPPQE I+AA  D     
Sbjct: 604  TKELIESKDEFEFEIGNGTVVSTLEGVVTQMSVGQCAHFNMNLPPQEFILAAVDDPARIL 663

Query: 701  XXXXXXXXXXXXXITLLSVMEPLEERMEQALFSPPLSKQRV 823
                         +TLL V EP EERMEQALFSPPLSKQRV
Sbjct: 664  SLLSSEVCFLEYHVTLLRVTEPPEERMEQALFSPPLSKQRV 704


>ref|XP_002330552.1| hypothetical protein POPTRDRAFT_270173 [Populus trichocarpa]
            gi|222872110|gb|EEF09241.1| hypothetical protein
            POPTRDRAFT_270173 [Populus trichocarpa]
          Length = 916

 Score =  205 bits (521), Expect = 1e-50
 Identities = 125/281 (44%), Positives = 160/281 (56%), Gaps = 7/281 (2%)
 Frame = +2

Query: 2    KLKVTESGEQET---NGGGPAVGAMGSVG---TFKCEVKIYSKTRELIMQCTPKESFKKQ 163
            KLKVTE     T   NGGG   G   SVG    F+CEVK++SK R+LI++C+PKE ++KQ
Sbjct: 413  KLKVTEVAGLATEYANGGGLNAGDGESVGLESNFRCEVKVFSKGRDLIIECSPKEIYRKQ 472

Query: 164  NDAIQDAALKILSWLNTFFKKLDLSIENLTVSGDELAIQIYPQYFSTEFVLCPSVHDHRQ 343
             DA   A+LK+LSWLN +FK L + +E L  S D L I    + F  EF L  S+H+ +Q
Sbjct: 473  TDATHSASLKVLSWLNAYFKDLGMPLEKLNCSADALDISFSLENFHKEFALSQSIHNVQQ 532

Query: 344  STRTRASRLLDSDCSS-QLNVMSEDTVLSINNGHCSGVSSSTGSLVCISYNICLLADGDC 520
            S  T+ S+L +S  +  Q  +  +D  L    G  SGV  S GSL+CISY++ L+ +G  
Sbjct: 533  S-GTQGSKLPESKSTDMQYTLSGQDVCLPNIEGSDSGVFPSNGSLLCISYSVSLVTEGGH 591

Query: 521  IXXXXXXXXXXXXXIGVRAVVPHLEAVVTQMSVGQSTCYTTELPPQELIMAAAGDXXXXX 700
                          +G  AV+  LEAVVTQMS GQ   +   LPPQE I+AA  D     
Sbjct: 592  TKELIESKDEFEFEMGAGAVISALEAVVTQMSAGQCAHFNMNLPPQEFILAAVDDPGRIH 651

Query: 701  XXXXXXXXXXXXXITLLSVMEPLEERMEQALFSPPLSKQRV 823
                         +TLL V +P EERMEQALFSPPLSKQRV
Sbjct: 652  SLLSSEACWLEYHVTLLRVTKPPEERMEQALFSPPLSKQRV 692


>ref|XP_004171716.1| PREDICTED: LOW QUALITY PROTEIN: small RNA 2'-O-methyltransferase-like
            [Cucumis sativus]
          Length = 816

 Score =  194 bits (494), Expect = 2e-47
 Identities = 122/282 (43%), Positives = 165/282 (58%), Gaps = 9/282 (3%)
 Frame = +2

Query: 5    LKVTES--GEQETNGGGPAVG---AMGSVGTFKCEVKIYSKTRELIMQCTPKESFKKQND 169
            L+VT+S   ++ TNGG  A      + S  TF+CEV+IYSK +EL+++C+PK++FKKQ D
Sbjct: 294  LQVTDSKAAQEHTNGGTIAENKGQVVESEDTFRCEVRIYSKNQELVLECSPKDTFKKQFD 353

Query: 170  AIQDAALKILSWLNTFFKKLDLSIENLTVSGDELAIQIYPQYFSTEFVLCPSVH----DH 337
            +IQ+ +LK+L WL+ +FK L++S+E LT   D L+IQ   Q F  E     SVH      
Sbjct: 354  SIQNVSLKVLLWLDIYFKDLNVSLERLTSYADALSIQFNSQRFFEELASYRSVHSGLNSK 413

Query: 338  RQSTRTRASRLLDSDCSSQLNVMSEDTVLSINNGHCSGVSSSTGSLVCISYNICLLADGD 517
             Q   +  S+ L   C+   ++   D+ L+I +G  S +S S GSLVCISYN+ L A+G 
Sbjct: 414  VQEEISHKSKDLKFPCT---HLGYGDSSLNI-HGSDSDISPSNGSLVCISYNVSLKAEGV 469

Query: 518  CIXXXXXXXXXXXXXIGVRAVVPHLEAVVTQMSVGQSTCYTTELPPQELIMAAAGDXXXX 697
             +             IG   V+P LEA+V QMSVGQS C+  EL P+E I+AA  +    
Sbjct: 470  EVRETIEKNDDYEFEIGSGCVIPCLEAIVQQMSVGQSACFCAELAPREFILAATLNSARI 529

Query: 698  XXXXXXXXXXXXXXITLLSVMEPLEERMEQALFSPPLSKQRV 823
                           TL+ V EPLE RMEQALFSPPLSKQRV
Sbjct: 530  LHLLDSSSCCLEYSCTLIRVTEPLEARMEQALFSPPLSKQRV 571


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