BLASTX nr result

ID: Panax21_contig00025306 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00025306
         (834 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004142129.1| PREDICTED: pre-mRNA-splicing factor CWC22 ho...   185   1e-44
ref|XP_004162101.1| PREDICTED: LOW QUALITY PROTEIN: pre-mRNA-spl...   183   5e-44
emb|CBI38093.3| unnamed protein product [Vitis vinifera]              183   5e-44
ref|XP_002265479.1| PREDICTED: pre-mRNA-splicing factor CWC22 ho...   183   5e-44
ref|XP_002530492.1| cell cycle control protein cwf22, putative [...   182   1e-43

>ref|XP_004142129.1| PREDICTED: pre-mRNA-splicing factor CWC22 homolog [Cucumis sativus]
          Length = 797

 Score =  185 bits (469), Expect = 1e-44
 Identities = 92/95 (96%), Positives = 94/95 (98%)
 Frame = +3

Query: 3   YIWLTEEDTTSSSRIFIKILFQELSEHLGIRLLNERLSDPTMQDSFESIFPRDNPKNTRF 182
           YI LTEEDTTSSSRIFIKILFQELSEHLGIRLLNERL+DPTMQDSFESIFPRDNPKNTRF
Sbjct: 658 YIRLTEEDTTSSSRIFIKILFQELSEHLGIRLLNERLTDPTMQDSFESIFPRDNPKNTRF 717

Query: 183 SINFFTSIGLGGITENLREYLKNMPRLIMQQQKPV 287
           SINFFTSIGLGG+TENLREYLKNMPRLIMQQQKPV
Sbjct: 718 SINFFTSIGLGGLTENLREYLKNMPRLIMQQQKPV 752


>ref|XP_004162101.1| PREDICTED: LOW QUALITY PROTEIN: pre-mRNA-splicing factor CWC22
           homolog, partial [Cucumis sativus]
          Length = 780

 Score =  183 bits (464), Expect = 5e-44
 Identities = 91/95 (95%), Positives = 93/95 (97%)
 Frame = +3

Query: 3   YIWLTEEDTTSSSRIFIKILFQELSEHLGIRLLNERLSDPTMQDSFESIFPRDNPKNTRF 182
           YI LTEEDTTSSSRIFIKILFQELSEHLGIRLLNERL+DPTMQDSFESIFPRDNPKNTRF
Sbjct: 658 YIRLTEEDTTSSSRIFIKILFQELSEHLGIRLLNERLTDPTMQDSFESIFPRDNPKNTRF 717

Query: 183 SINFFTSIGLGGITENLREYLKNMPRLIMQQQKPV 287
           SINFFTSIGLGG+TENLREY KNMPRLIMQQQKPV
Sbjct: 718 SINFFTSIGLGGLTENLREYXKNMPRLIMQQQKPV 752


>emb|CBI38093.3| unnamed protein product [Vitis vinifera]
          Length = 2607

 Score =  183 bits (464), Expect = 5e-44
 Identities = 91/95 (95%), Positives = 94/95 (98%)
 Frame = +3

Query: 3    YIWLTEEDTTSSSRIFIKILFQELSEHLGIRLLNERLSDPTMQDSFESIFPRDNPKNTRF 182
            YI LTEEDTTSSSRIFIKILFQELSEHLGIRLLNERL+DP+MQDSFESIFP+DNPKNTRF
Sbjct: 2467 YIRLTEEDTTSSSRIFIKILFQELSEHLGIRLLNERLTDPSMQDSFESIFPKDNPKNTRF 2526

Query: 183  SINFFTSIGLGGITENLREYLKNMPRLIMQQQKPV 287
            SINFFTSIGLGGITENLREYLKNMPRLIMQQQKPV
Sbjct: 2527 SINFFTSIGLGGITENLREYLKNMPRLIMQQQKPV 2561


>ref|XP_002265479.1| PREDICTED: pre-mRNA-splicing factor CWC22 homolog [Vitis vinifera]
          Length = 785

 Score =  183 bits (464), Expect = 5e-44
 Identities = 91/95 (95%), Positives = 94/95 (98%)
 Frame = +3

Query: 3   YIWLTEEDTTSSSRIFIKILFQELSEHLGIRLLNERLSDPTMQDSFESIFPRDNPKNTRF 182
           YI LTEEDTTSSSRIFIKILFQELSEHLGIRLLNERL+DP+MQDSFESIFP+DNPKNTRF
Sbjct: 645 YIRLTEEDTTSSSRIFIKILFQELSEHLGIRLLNERLTDPSMQDSFESIFPKDNPKNTRF 704

Query: 183 SINFFTSIGLGGITENLREYLKNMPRLIMQQQKPV 287
           SINFFTSIGLGGITENLREYLKNMPRLIMQQQKPV
Sbjct: 705 SINFFTSIGLGGITENLREYLKNMPRLIMQQQKPV 739


>ref|XP_002530492.1| cell cycle control protein cwf22, putative [Ricinus communis]
           gi|223529949|gb|EEF31876.1| cell cycle control protein
           cwf22, putative [Ricinus communis]
          Length = 810

 Score =  182 bits (461), Expect = 1e-43
 Identities = 91/95 (95%), Positives = 92/95 (96%)
 Frame = +3

Query: 3   YIWLTEEDTTSSSRIFIKILFQELSEHLGIRLLNERLSDPTMQDSFESIFPRDNPKNTRF 182
           YI LTEEDTTSSSRIFIKILFQELSEHLGIR LNERL+DP MQDSFESIFPRDNPKNTRF
Sbjct: 617 YIRLTEEDTTSSSRIFIKILFQELSEHLGIRTLNERLTDPNMQDSFESIFPRDNPKNTRF 676

Query: 183 SINFFTSIGLGGITENLREYLKNMPRLIMQQQKPV 287
           SINFFTSIGLGGITENLREYLKNMPRLIMQQQKPV
Sbjct: 677 SINFFTSIGLGGITENLREYLKNMPRLIMQQQKPV 711


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