BLASTX nr result
ID: Panax21_contig00025298
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00025298 (604 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003631239.1| PREDICTED: cytochrome c6, chloroplastic isof... 219 4e-55 ref|XP_002277599.2| PREDICTED: cytochrome c6, chloroplastic isof... 218 6e-55 emb|CAN61634.1| hypothetical protein VITISV_008455 [Vitis vinifera] 206 2e-51 ref|XP_002333234.1| predicted protein [Populus trichocarpa] gi|2... 201 1e-49 ref|XP_002865286.1| electron transporter protein [Arabidopsis ly... 197 9e-49 >ref|XP_003631239.1| PREDICTED: cytochrome c6, chloroplastic isoform 2 [Vitis vinifera] gi|297737964|emb|CBI27165.3| unnamed protein product [Vitis vinifera] Length = 173 Score = 219 bits (557), Expect = 4e-55 Identities = 116/174 (66%), Positives = 128/174 (73%) Frame = -3 Query: 578 LTMPSTCKIKCSFQLSTKGNVKEGGQDPVAKKGKEQVKFLIKXXXXXXXXXXXXXXXPIV 399 L + TC+ ++ L KG V E G+ PV +K K QVKFL PI Sbjct: 4 LCLMPTCR-SMNYALPVKGMVGERGKTPVHEKQK-QVKFL--KGLAPPLMAAVVALSPIC 59 Query: 398 NPPVSFAQTVDIQRGATLFNRACIACHVGGGNIIQPGATLFLKDLERNRVDTEDGIYHVT 219 N PVS AQT DIQRGA LF RACI CH GGNIIQPGATLFLKDL+RN VDTE+ IY VT Sbjct: 60 NTPVSLAQTTDIQRGAALFGRACIGCHDAGGNIIQPGATLFLKDLQRNGVDTEEEIYRVT 119 Query: 218 YFGKGRMPGFGENCTPRGQCTFGARLQEDEIRLLAEFVKSQADQGWPNIEISGD 57 Y+GKGRMPGFGENCTPRGQCTFGARLQE+EI+LLAEFVK QADQGWPN+EISGD Sbjct: 120 YYGKGRMPGFGENCTPRGQCTFGARLQEEEIKLLAEFVKLQADQGWPNLEISGD 173 >ref|XP_002277599.2| PREDICTED: cytochrome c6, chloroplastic isoform 1 [Vitis vinifera] Length = 167 Score = 218 bits (555), Expect = 6e-55 Identities = 115/169 (68%), Positives = 126/169 (74%) Frame = -3 Query: 563 TCKIKCSFQLSTKGNVKEGGQDPVAKKGKEQVKFLIKXXXXXXXXXXXXXXXPIVNPPVS 384 TC+ ++ L KG V E G+ PV +K K QVKFL PI N PVS Sbjct: 3 TCR-SMNYALPVKGMVGERGKTPVHEKQK-QVKFL--KGLAPPLMAAVVALSPICNTPVS 58 Query: 383 FAQTVDIQRGATLFNRACIACHVGGGNIIQPGATLFLKDLERNRVDTEDGIYHVTYFGKG 204 AQT DIQRGA LF RACI CH GGNIIQPGATLFLKDL+RN VDTE+ IY VTY+GKG Sbjct: 59 LAQTTDIQRGAALFGRACIGCHDAGGNIIQPGATLFLKDLQRNGVDTEEEIYRVTYYGKG 118 Query: 203 RMPGFGENCTPRGQCTFGARLQEDEIRLLAEFVKSQADQGWPNIEISGD 57 RMPGFGENCTPRGQCTFGARLQE+EI+LLAEFVK QADQGWPN+EISGD Sbjct: 119 RMPGFGENCTPRGQCTFGARLQEEEIKLLAEFVKLQADQGWPNLEISGD 167 >emb|CAN61634.1| hypothetical protein VITISV_008455 [Vitis vinifera] Length = 125 Score = 206 bits (525), Expect = 2e-51 Identities = 97/116 (83%), Positives = 103/116 (88%) Frame = -3 Query: 404 IVNPPVSFAQTVDIQRGATLFNRACIACHVGGGNIIQPGATLFLKDLERNRVDTEDGIYH 225 I N PVS AQT DIQRGA LF RACI CH GGNIIQPGATLFLKDL+RN VDTE+ IY Sbjct: 10 ICNTPVSLAQTTDIQRGAALFGRACIGCHDAGGNIIQPGATLFLKDLQRNGVDTEEEIYR 69 Query: 224 VTYFGKGRMPGFGENCTPRGQCTFGARLQEDEIRLLAEFVKSQADQGWPNIEISGD 57 VTY+GKGRMPGFGENCTPRGQCTFGARLQE+EI+LLAEFVK QADQGWPN+EISGD Sbjct: 70 VTYYGKGRMPGFGENCTPRGQCTFGARLQEEEIKLLAEFVKLQADQGWPNLEISGD 125 >ref|XP_002333234.1| predicted protein [Populus trichocarpa] gi|222835556|gb|EEE73991.1| predicted protein [Populus trichocarpa] Length = 159 Score = 201 bits (510), Expect = 1e-49 Identities = 105/158 (66%), Positives = 120/158 (75%), Gaps = 1/158 (0%) Frame = -3 Query: 527 KGNVKEG-GQDPVAKKGKEQVKFLIKXXXXXXXXXXXXXXXPIVNPPVSFAQTVDIQRGA 351 KGN K+G Q+PV K KE VK L+K I N PVS QT+D+QRGA Sbjct: 5 KGNEKQGESQNPVVLKQKE-VK-LVKSLALPLMAALVALSP-IGNTPVSLGQTLDVQRGA 61 Query: 350 TLFNRACIACHVGGGNIIQPGATLFLKDLERNRVDTEDGIYHVTYFGKGRMPGFGENCTP 171 +LF+R CI CH GGNIIQPGATLF KDL+RN VDTE+ IY +TYFGKGRMPGFGE+CTP Sbjct: 62 SLFSRTCIGCHDAGGNIIQPGATLFTKDLQRNGVDTEEEIYRMTYFGKGRMPGFGESCTP 121 Query: 170 RGQCTFGARLQEDEIRLLAEFVKSQADQGWPNIEISGD 57 RGQCTFG RLQ++EI+LLA+FVKSQADQGWPNIEIS D Sbjct: 122 RGQCTFGPRLQDEEIKLLAQFVKSQADQGWPNIEISQD 159 >ref|XP_002865286.1| electron transporter protein [Arabidopsis lyrata subsp. lyrata] gi|297311121|gb|EFH41545.1| electron transporter protein [Arabidopsis lyrata subsp. lyrata] Length = 176 Score = 197 bits (502), Expect = 9e-49 Identities = 103/171 (60%), Positives = 115/171 (67%) Frame = -3 Query: 584 LSLTMPSTCKIKCSFQLSTKGNVKEGGQDPVAKKGKEQVKFLIKXXXXXXXXXXXXXXXP 405 LS T + CS Q G +E Q P+ + + FLIK Sbjct: 5 LSCASARTSNLFCSSQ-KVNGREREL-QYPILPNHNKDLNFLIKKLAQPLTAVLLAVSPI 62 Query: 404 IVNPPVSFAQTVDIQRGATLFNRACIACHVGGGNIIQPGATLFLKDLERNRVDTEDGIYH 225 I PP S QT+DIQRGATLFNRACI CH GGNIIQPGATLF KDLERN VDTE+ IY Sbjct: 63 ICFPPESLGQTLDIQRGATLFNRACIGCHDTGGNIIQPGATLFTKDLERNGVDTEEEIYR 122 Query: 224 VTYFGKGRMPGFGENCTPRGQCTFGARLQEDEIRLLAEFVKSQADQGWPNI 72 VTYFGKGRMPGFGE CTPRGQCTFG RLQ++EI+LLAEFVK QAD+GWPN+ Sbjct: 123 VTYFGKGRMPGFGEKCTPRGQCTFGPRLQDEEIKLLAEFVKFQADKGWPNV 173